BLASTX nr result

ID: Coptis23_contig00008153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008153
         (1845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|2...   694   0.0  
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...   694   0.0  
emb|CBI16861.3| unnamed protein product [Vitis vinifera]              691   0.0  
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...   668   0.0  
ref|XP_003551797.1| PREDICTED: translation initiation factor eIF...   667   0.0  

>ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1|
            predicted protein [Populus trichocarpa]
          Length = 634

 Score =  694 bits (1792), Expect = 0.0
 Identities = 360/499 (72%), Positives = 400/499 (80%), Gaps = 5/499 (1%)
 Frame = -1

Query: 1842 ASFTTVSAVKMA--DKG---LVETKNDPPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXX 1678
            +  TTVS V     +KG    VE +ND  + SK LKEKT+                    
Sbjct: 137  SGLTTVSVVNNLPIEKGGGVAVEMQNDQSSRSKSLKEKTTKAERRALQEAQRAAKAAAKA 196

Query: 1677 EGGRHTGAIASGGAAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRM 1498
            EGG+ T A ASG AA AK+ K V  P QK D+    V EKKG DRPPEKDRKK++P PRM
Sbjct: 197  EGGK-TPAAASGAAASAKSAKSVKPPSQKNDSATVAVSEKKGGDRPPEKDRKKEVPQPRM 255

Query: 1497 QFDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYK 1318
            Q+DDK+RVEKAKRR+VVKQTEARNRVELFRHLPQYE  TQL  LESKFF+LDPMHPAVYK
Sbjct: 256  QYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYERRTQLTELESKFFELDPMHPAVYK 315

Query: 1317 VGLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPL 1138
            VGLQYL+GDVCGGNARCIAMLQAF+EAI DYSTP EK L RDLTAKI SY+SF+ ECRPL
Sbjct: 316  VGLQYLSGDVCGGNARCIAMLQAFQEAIKDYSTPSEKTLARDLTAKIGSYLSFLIECRPL 375

Query: 1137 SISMGNAIRFLKNRIAKLPLSLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRD 958
            SISMGNAIRFLKNRIAKLPL+LSE E KA L SDIDRFINEKI+LADKVIV+HAVTKI D
Sbjct: 376  SISMGNAIRFLKNRIAKLPLTLSEAEVKATLHSDIDRFINEKIILADKVIVKHAVTKISD 435

Query: 957  GDVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRPKXXXXXXXXXXXXXXLSCTYTHIN 778
            GDVLLT+G+ S VEM+L++AH++GKQFRVVVVDSRPK              + CTYTH+N
Sbjct: 436  GDVLLTYGSPSAVEMVLLHAHELGKQFRVVVVDSRPKLEGQLLLHRLVGKGIDCTYTHVN 495

Query: 777  AISYIMHEVTRVFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQL 598
            AISYIMHEVTRVFLGASSVL NGTVYSRVG+ACV+MVA AFRVPVL+CCEAYKFHERVQL
Sbjct: 496  AISYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQL 555

Query: 597  DSICSNELGDPDTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMV 418
            DS+CSNELGDPD ISKV GRED+N L+  +DSE LQLLNL YD TPSDY+SMIITDYGMV
Sbjct: 556  DSLCSNELGDPDVISKVRGREDINLLDGSTDSENLQLLNLIYDATPSDYISMIITDYGMV 615

Query: 417  PPTSVPVIVREYMREPLWM 361
            PPTSVPVIVR+Y RE LW+
Sbjct: 616  PPTSVPVIVRDYQREHLWI 634


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Vitis vinifera]
          Length = 650

 Score =  694 bits (1790), Expect = 0.0
 Identities = 364/504 (72%), Positives = 402/504 (79%), Gaps = 10/504 (1%)
 Frame = -1

Query: 1842 ASFTTVSAVKM-------ADKGLVETKNDPPTSSKPLKEKTSXXXXXXXXXXXXXXXXXX 1684
            ++ TTVS V M       +    +E +N+ P SS+ LKEKTS                  
Sbjct: 149  SNLTTVSVVNMPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAA 208

Query: 1683 XXEGGRHTGAIASGGAA---HAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDI 1513
              E  +    IA+ G A   +AK  KV     QKKD+      EKKG DRPPEKDRKKD+
Sbjct: 209  KAEVSK--APIAASGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDV 266

Query: 1512 PPPRMQFDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMH 1333
            P PRMQFDDK+RVEKAKRR+VV+  E RNRVELFRHLPQYE GT LP+LESKFF LDPMH
Sbjct: 267  PHPRMQFDDKSRVEKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMH 326

Query: 1332 PAVYKVGLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMN 1153
            PAVYKVGLQYL GDV GGNARCIAMLQAF+EAI DYSTPPEK LVRDLTA++SSYVSF+ 
Sbjct: 327  PAVYKVGLQYLAGDVSGGNARCIAMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLI 386

Query: 1152 ECRPLSISMGNAIRFLKNRIAKLPLSLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAV 973
            ECRPLSISMGNAIRFLK+RIAKLPLSLSE EAKA LQSDI+RFINEKIVLADKVIV HAV
Sbjct: 387  ECRPLSISMGNAIRFLKSRIAKLPLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAV 446

Query: 972  TKIRDGDVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRPKXXXXXXXXXXXXXXLSCT 793
            TKIRDGDVLLT+G+SS VEMIL+YAH++GKQFRVVVVDSRPK              LSCT
Sbjct: 447  TKIRDGDVLLTYGSSSAVEMILLYAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCT 506

Query: 792  YTHINAISYIMHEVTRVFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFH 613
            YTHINA+SYIMHEVTRVFLGASSVL NGTVYSRVG+ACVSMVA AFRVPVL+CCEAYKF+
Sbjct: 507  YTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFY 566

Query: 612  ERVQLDSICSNELGDPDTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIIT 433
            ERVQLDSICSNELGDPD ISKVPGRE++N+L++W+ SE LQLLNL YD TPSDYVSMIIT
Sbjct: 567  ERVQLDSICSNELGDPDAISKVPGREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIIT 626

Query: 432  DYGMVPPTSVPVIVREYMREPLWM 361
            DYGMVPPTSVPVIVREY RE LW+
Sbjct: 627  DYGMVPPTSVPVIVREYRREHLWI 650


>emb|CBI16861.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  691 bits (1783), Expect = 0.0
 Identities = 358/481 (74%), Positives = 393/481 (81%), Gaps = 3/481 (0%)
 Frame = -1

Query: 1794 VETKNDPPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXEGGRHTGAIASGGAA---HAK 1624
            +E +N+ P SS+ LKEKTS                    E  +    IA+ G A   +AK
Sbjct: 14   IEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSK--APIAASGVATSVNAK 71

Query: 1623 TTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQFDDKTRVEKAKRRSVVK 1444
              KV     QKKD+      EKKG DRPPEKDRKKD+P PRMQFDDK+RVEKAKRR+VV+
Sbjct: 72   PAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRVEKAKRRAVVR 131

Query: 1443 QTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCI 1264
              E RNRVELFRHLPQYE GT LP+LESKFF LDPMHPAVYKVGLQYL GDV GGNARCI
Sbjct: 132  PIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCI 191

Query: 1263 AMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKL 1084
            AMLQAF+EAI DYSTPPEK LVRDLTA++SSYVSF+ ECRPLSISMGNAIRFLK+RIAKL
Sbjct: 192  AMLQAFQEAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKL 251

Query: 1083 PLSLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILV 904
            PLSLSE EAKA LQSDI+RFINEKIVLADKVIV HAVTKIRDGDVLLT+G+SS VEMIL+
Sbjct: 252  PLSLSESEAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILL 311

Query: 903  YAHDIGKQFRVVVVDSRPKXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASS 724
            YAH++GKQFRVVVVDSRPK              LSCTYTHINA+SYIMHEVTRVFLGASS
Sbjct: 312  YAHELGKQFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVFLGASS 371

Query: 723  VLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVP 544
            VL NGTVYSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDPD ISKVP
Sbjct: 372  VLSNGTVYSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDAISKVP 431

Query: 543  GREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLW 364
            GRE++N+L++W+ SE LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVREY RE LW
Sbjct: 432  GREEINYLDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYRREHLW 491

Query: 363  M 361
            +
Sbjct: 492  I 492


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
            protein product [Vitis vinifera]
          Length = 649

 Score =  668 bits (1723), Expect = 0.0
 Identities = 342/488 (70%), Positives = 381/488 (78%)
 Frame = -1

Query: 1824 SAVKMADKGLVETKNDPPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXEGGRHTGAIAS 1645
            + ++ +   + E +N+ PTSSKPLKEKT+                     G +   A  +
Sbjct: 168  AVIEKSGGAVAEMQNELPTSSKPLKEKTTKAERRALQESQRAAKAAGKAGGNKPAAASGA 227

Query: 1644 GGAAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQFDDKTRVEKA 1465
                  K +K V   P    A      +KKG +R PEKD+KKD+PPPRMQFDDK RVEKA
Sbjct: 228  ATPMKEKASKAVKQVPSSVAAS-----DKKGGERIPEKDKKKDVPPPRMQFDDKNRVEKA 282

Query: 1464 KRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVC 1285
            KRR+VVK TEARNRVELFRHLPQYEHGTQLP LESKFFQLDP+HPAV KVG QYL GD+ 
Sbjct: 283  KRRAVVKPTEARNRVELFRHLPQYEHGTQLPKLESKFFQLDPVHPAVQKVGFQYLAGDIV 342

Query: 1284 GGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFL 1105
            GGNARCIAML+AF+EAI DYS PPEK L RDLTAKISSYVSF+NECRPLSISMGN+IRFL
Sbjct: 343  GGNARCIAMLRAFQEAIKDYSMPPEKTLARDLTAKISSYVSFLNECRPLSISMGNSIRFL 402

Query: 1104 KNRIAKLPLSLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASS 925
            KNRIAKLPL++SE EAK  L SDIDRFINEKIVLADKVIV HA TKIRDGDVLLT+G S 
Sbjct: 403  KNRIAKLPLTVSESEAKDALYSDIDRFINEKIVLADKVIVRHAATKIRDGDVLLTYGFSC 462

Query: 924  VVEMILVYAHDIGKQFRVVVVDSRPKXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTR 745
            VVEM ++YAH++G+QFRVVVVDS PK              LSC+YT INA+SYIMHEVTR
Sbjct: 463  VVEMTMLYAHELGRQFRVVVVDSHPKFEGQALLRRLVEKGLSCSYTQINAVSYIMHEVTR 522

Query: 744  VFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDP 565
            VFLGA+S+  NGTVYSRVG+ACV+MVA AFRVPVLICCEAYKFHERVQLDSICSNELGDP
Sbjct: 523  VFLGAASIFSNGTVYSRVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELGDP 582

Query: 564  DTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVRE 385
            D ISKV GR DVN+L+NW D E LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVRE
Sbjct: 583  DVISKVAGRADVNYLDNWRDKENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVRE 642

Query: 384  YMREPLWM 361
            Y RE LW+
Sbjct: 643  Y-REHLWI 649


>ref|XP_003551797.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 627

 Score =  667 bits (1720), Expect = 0.0
 Identities = 346/498 (69%), Positives = 390/498 (78%), Gaps = 4/498 (0%)
 Frame = -1

Query: 1842 ASFTTVSAVKMADKGL----VETKNDPPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXE 1675
            +  TTVS V  A   +    VE K+    + +  KEKTS                    E
Sbjct: 134  SELTTVSVVNAASLSIRGSAVEVKDQALNTKQQKKEKTSKAERRALQEAQRAAKAAAKAE 193

Query: 1674 GGRHTGAIASGGAAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQ 1495
            G + +G +AS     AK  K    PPQK D       EKKG DRPPEKDRKKD+P PR+Q
Sbjct: 194  GNKASGTLASVNVKPAKAAK----PPQKVDNASVAASEKKGGDRPPEKDRKKDVPQPRLQ 249

Query: 1494 FDDKTRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKV 1315
            +DDK+RVEKAKRR+VVKQTEA+NRVELFRHLPQYEHG+QLP+LE+KFFQL P+HPAVYKV
Sbjct: 250  YDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPAVYKV 309

Query: 1314 GLQYLTGDVCGGNARCIAMLQAFKEAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLS 1135
            GLQYL+GD+ GGNARCIAMLQAF+EAI DY  P EK LVRDLTAKISSYVSF+ ECRPLS
Sbjct: 310  GLQYLSGDISGGNARCIAMLQAFQEAIEDYRVPSEKTLVRDLTAKISSYVSFLIECRPLS 369

Query: 1134 ISMGNAIRFLKNRIAKLPLSLSEPEAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDG 955
            ISMGNAIRFLK+RIAKLPL+LSE E+K  LQSDI+RFI EKI+LA+KVIV+HAVTKIRDG
Sbjct: 370  ISMGNAIRFLKSRIAKLPLTLSESESKTSLQSDIERFIYEKIILANKVIVKHAVTKIRDG 429

Query: 954  DVLLTHGASSVVEMILVYAHDIGKQFRVVVVDSRPKXXXXXXXXXXXXXXLSCTYTHINA 775
            DVLLT+G+SS VEMIL++AH +GKQFRVVVVDSRPK              LSCTY HINA
Sbjct: 430  DVLLTYGSSSAVEMILLHAHGLGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYIHINA 489

Query: 774  ISYIMHEVTRVFLGASSVLCNGTVYSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLD 595
            +SYIM+EVTRVFLGASSVL NGTVYS VG+ACV+MVA AF VPVL+CCEAYKFHERVQ D
Sbjct: 490  VSYIMNEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFHVPVLVCCEAYKFHERVQHD 549

Query: 594  SICSNELGDPDTISKVPGREDVNHLENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVP 415
            SICSNELGDPD IS V  REDVNHLE W+++E LQLLNL YD TPSDYVSMIITDYGMVP
Sbjct: 550  SICSNELGDPDVISTVQSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVP 609

Query: 414  PTSVPVIVREYMREPLWM 361
            PTSVPVIVREY RE +W+
Sbjct: 610  PTSVPVIVREYSREQVWI 627


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