BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008134
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95784.1| unknown [Populus trichocarpa]                           58   7e-07
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...    56   4e-06

>gb|ABK95784.1| unknown [Populus trichocarpa]
          Length = 241

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
 Frame = -3

Query: 204 LPTRFLSSLSISKPPTTSSL---RRQPSFLSHA-----RVLSPLMTCQTRNRVHRPGGDS 49
           LP R LS+ SI+ PP+  ++   R+    LSHA     +  +P      R RV+R  G+S
Sbjct: 20  LPKRLLSTFSITHPPSLPTVLPCRQSLPSLSHALQSINKTTNPTRFTSIRCRVNR-AGNS 78

Query: 48  SYSPLNSGSNFSDRPP 1
            YSPLNSGSNFSDRPP
Sbjct: 79  GYSPLNSGSNFSDRPP 94


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 40/82 (48%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
 Frame = -3

Query: 234 RNLLSKPTRFLPTRFLSSLSISKPPTTSSL---RRQPSFLSHA-RVLSPLMTCQTRNRVH 67
           + LLS  T    T   S+ SI  PP   SL   RR    LSHA   + P      R RV+
Sbjct: 21  KRLLSTITTTTTTATTSTTSIICPPLPPSLLFTRRSLLPLSHAVHSIKPTRFTSIRCRVN 80

Query: 66  RPGGDSSYSPLNSGSNFSDRPP 1
           R  G+S+YSPLNSGSNFSDRPP
Sbjct: 81  R-AGNSAYSPLNSGSNFSDRPP 101