BLASTX nr result

ID: Coptis23_contig00008110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008110
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525833.1| hypothetical protein RCOM_0822650 [Ricinus c...    60   1e-07
emb|CBI34074.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002270171.1| PREDICTED: 1,4-dihydroxy-2-naphthoate polypr...    60   2e-07
ref|XP_002886606.1| hypothetical protein ARALYDRAFT_475272 [Arab...    58   9e-07
ref|XP_002323971.1| predicted protein [Populus trichocarpa] gi|1...    58   9e-07

>ref|XP_002525833.1| hypothetical protein RCOM_0822650 [Ricinus communis]
           gi|223534838|gb|EEF36527.1| hypothetical protein
           RCOM_0822650 [Ricinus communis]
          Length = 176

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +1

Query: 1   DKSKIFMAKYYCVRLHALFGAALSVGLVAARTVA*PYMP 117
           DK KIFMAKYYCVRLHALFG AL+ GLVAAR +   ++P
Sbjct: 133 DKGKIFMAKYYCVRLHALFGTALAAGLVAARMLTRKHVP 171


>emb|CBI34074.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   DKSKIFMAKYYCVRLHALFGAALSVGLVAAR 93
           D SKIFMAKYYCVRLHALFGAAL+ GLVAAR
Sbjct: 351 DNSKIFMAKYYCVRLHALFGAALAAGLVAAR 381


>ref|XP_002270171.1| PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase,
           chloroplastic-like [Vitis vinifera]
          Length = 364

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   DKSKIFMAKYYCVRLHALFGAALSVGLVAAR 93
           D SKIFMAKYYCVRLHALFGAAL+ GLVAAR
Sbjct: 329 DNSKIFMAKYYCVRLHALFGAALAAGLVAAR 359


>ref|XP_002886606.1| hypothetical protein ARALYDRAFT_475272 [Arabidopsis lyrata subsp.
           lyrata] gi|297332447|gb|EFH62865.1| hypothetical protein
           ARALYDRAFT_475272 [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/31 (87%), Positives = 28/31 (90%)
 Frame = +1

Query: 1   DKSKIFMAKYYCVRLHALFGAALSVGLVAAR 93
           D  KIFMAKYYCVRLHALFGAALS+GLV AR
Sbjct: 257 DNGKIFMAKYYCVRLHALFGAALSLGLVIAR 287


>ref|XP_002323971.1| predicted protein [Populus trichocarpa] gi|118485902|gb|ABK94797.1|
           unknown [Populus trichocarpa]
           gi|222866973|gb|EEF04104.1| predicted protein [Populus
           trichocarpa]
          Length = 401

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   DKSKIFMAKYYCVRLHALFGAALSVGLVAAR 93
           DK KIFMAKY+CVRLHALFGAAL+ GLVAAR
Sbjct: 364 DKGKIFMAKYFCVRLHALFGAALASGLVAAR 394


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