BLASTX nr result

ID: Coptis23_contig00008096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008096
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s...    87   1e-15
ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]         85   7e-15
ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002533868.1| protein with unknown function [Ricinus commu...    80   1e-13

>ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/57 (66%), Positives = 51/57 (89%)
 Frame = -3

Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60
           ++++SSS++DETLRASYRGASP  GTPK+GRS++RFGRD   SS+SP+++E SNPPW
Sbjct: 458 AISRSSSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSISSRSPSVRENSNPPW 514


>ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus]
          Length = 509

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = -3

Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60
           ++AKSSS+ DETLRASYRG SP A TPK+GRSL+RF RD  F S+SP++KEGSNP W
Sbjct: 453 AIAKSSSSFDETLRASYRGGSPSAATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAW 509


>ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera]
          Length = 504

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/57 (64%), Positives = 50/57 (87%)
 Frame = -3

Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60
           ++AKSS ++DE+LRASYRGASP   TPK+GRS++RFGRD   S++SP+++EGSNPPW
Sbjct: 448 AIAKSSCSVDESLRASYRGASPGISTPKSGRSMSRFGRDGSTSTRSPSVREGSNPPW 504


>ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|222861951|gb|EEE99493.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/57 (63%), Positives = 49/57 (85%)
 Frame = -3

Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60
           ++++S S++DETLRASYRGASP  GTPK+GRS++RFGRD    S+SP+++E SNPPW
Sbjct: 415 AISRSLSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSMGSRSPSVRENSNPPW 471


>ref|XP_002533868.1| protein with unknown function [Ricinus communis]
           gi|223526190|gb|EEF28518.1| protein with unknown
           function [Ricinus communis]
          Length = 519

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/57 (61%), Positives = 49/57 (85%)
 Frame = -3

Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60
           +++KSSS++DE+LRASYRG+SP  GTPK+ RS++RFGRD    S+SP+++E SNPPW
Sbjct: 463 AISKSSSSVDESLRASYRGSSPGIGTPKSVRSVSRFGRDGSMGSRSPSVREDSNPPW 519


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