BLASTX nr result
ID: Coptis23_contig00008096
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008096 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|2... 88 6e-16 ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis s... 87 1e-15 ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] 85 7e-15 ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|2... 84 9e-15 ref|XP_002533868.1| protein with unknown function [Ricinus commu... 80 1e-13 >ref|XP_002301584.1| predicted protein [Populus trichocarpa] gi|222843310|gb|EEE80857.1| predicted protein [Populus trichocarpa] Length = 514 Score = 88.2 bits (217), Expect = 6e-16 Identities = 38/57 (66%), Positives = 51/57 (89%) Frame = -3 Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60 ++++SSS++DETLRASYRGASP GTPK+GRS++RFGRD SS+SP+++E SNPPW Sbjct: 458 AISRSSSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSISSRSPSVRENSNPPW 514 >ref|XP_004144540.1| PREDICTED: protein DGCR14 homolog [Cucumis sativus] Length = 509 Score = 87.4 bits (215), Expect = 1e-15 Identities = 40/57 (70%), Positives = 48/57 (84%) Frame = -3 Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60 ++AKSSS+ DETLRASYRG SP A TPK+GRSL+RF RD F S+SP++KEGSNP W Sbjct: 453 AIAKSSSSFDETLRASYRGGSPSAATPKSGRSLSRFARDGSFGSRSPSVKEGSNPAW 509 >ref|XP_002272703.1| PREDICTED: protein DGCR14 [Vitis vinifera] Length = 504 Score = 84.7 bits (208), Expect = 7e-15 Identities = 37/57 (64%), Positives = 50/57 (87%) Frame = -3 Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60 ++AKSS ++DE+LRASYRGASP TPK+GRS++RFGRD S++SP+++EGSNPPW Sbjct: 448 AIAKSSCSVDESLRASYRGASPGISTPKSGRSMSRFGRDGSTSTRSPSVREGSNPPW 504 >ref|XP_002321178.1| predicted protein [Populus trichocarpa] gi|222861951|gb|EEE99493.1| predicted protein [Populus trichocarpa] Length = 471 Score = 84.3 bits (207), Expect = 9e-15 Identities = 36/57 (63%), Positives = 49/57 (85%) Frame = -3 Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60 ++++S S++DETLRASYRGASP GTPK+GRS++RFGRD S+SP+++E SNPPW Sbjct: 415 AISRSLSSVDETLRASYRGASPGVGTPKSGRSISRFGRDGSMGSRSPSVRENSNPPW 471 >ref|XP_002533868.1| protein with unknown function [Ricinus communis] gi|223526190|gb|EEF28518.1| protein with unknown function [Ricinus communis] Length = 519 Score = 80.5 bits (197), Expect = 1e-13 Identities = 35/57 (61%), Positives = 49/57 (85%) Frame = -3 Query: 230 SMAKSSSTIDETLRASYRGASPIAGTPKAGRSLTRFGRDSCFSSKSPALKEGSNPPW 60 +++KSSS++DE+LRASYRG+SP GTPK+ RS++RFGRD S+SP+++E SNPPW Sbjct: 463 AISKSSSSVDESLRASYRGSSPGIGTPKSVRSVSRFGRDGSMGSRSPSVREDSNPPW 519