BLASTX nr result
ID: Coptis23_contig00008089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008089
(1267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu... 522 e-146
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2... 516 e-144
emb|CBI15390.3| unnamed protein product [Vitis vinifera] 510 e-142
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein... 510 e-142
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein... 499 e-139
>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
gi|223549179|gb|EEF50668.1| RNA binding protein, putative
[Ricinus communis]
Length = 1000
Score = 522 bits (1344), Expect = e-146
Identities = 263/424 (62%), Positives = 319/424 (75%), Gaps = 2/424 (0%)
Frame = +2
Query: 2 GGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALF 181
GGYSAGYYNTVGSKEGWTPQ+FTSSRK RAE K+Q+ILNFLDDDE+AE++ RSL TS+ F
Sbjct: 61 GGYSAGYYNTVGSKEGWTPQSFTSSRKNRAEVKQQNILNFLDDDERAELEDRSLGTSSQF 120
Query: 182 DTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKD 361
DTFGFTAA+ A+KQAEKEQ +RPSAIPGPVPDE+V PA SIG+KLLLKMGWRHGHSI+
Sbjct: 121 DTFGFTAAEYARKQAEKEQQQRPSAIPGPVPDELVLPATESIGVKLLLKMGWRHGHSIRG 180
Query: 362 PRTNLPYDARREARKAFLAFSSDDAKPSLARFEP--DEIASEGDNEQSTDDIASASKSTP 535
R N YDARREARKA LA SSDDA + EP D++ S G S +D S+STP
Sbjct: 181 SRANSLYDARREARKALLALSSDDANVHCIKSEPGEDDLGSLG---LSVNDDVQTSRSTP 237
Query: 536 VFVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGNQELRSRGVFPLKDDLFASKSGKIAP 715
VFVLNPKQD++GLG+DP+KHAPEFRE+KR RVS N+E +R ++D LF KSGK AP
Sbjct: 238 VFVLNPKQDLYGLGYDPYKHAPEFREKKRSRVSDNREPGNRKALLMRDGLFGFKSGKAAP 297
Query: 716 GFGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKVA 895
GFGIG +Y + Y+FEET V+++EEP+ I+ D K E+G LPGF+VA
Sbjct: 298 GFGIGALEEYDAEDEDLYGTAYDFEETCVEEVEEPARISTDHKQKLVWKEQGVLPGFRVA 357
Query: 896 SSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAGPPPPEVSLPQDKDRKLLIDGFAA 1075
S+SD+QLERF+PPVIP DF P HKF +L+ K PPPPEV P D + KLLI+G A
Sbjct: 358 SNSDYQLERFDPPVIPKDFVPHHKFPGSLQADDKHTIPPPPEVPPPDDNNLKLLIEGVAT 417
Query: 1076 LVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVP 1255
LV RCGKLFE+LSR+KN++NPLFSFL+GG+GH+YYAR+LWEE +D +S
Sbjct: 418 LVARCGKLFEDLSRDKNQSNPLFSFLNGGNGHEYYARKLWEECQKCNDQKHLALDGKSSS 477
Query: 1256 SLQK 1267
S+Q+
Sbjct: 478 SVQR 481
>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
predicted protein [Populus trichocarpa]
Length = 965
Score = 516 bits (1329), Expect = e-144
Identities = 257/403 (63%), Positives = 308/403 (76%), Gaps = 3/403 (0%)
Frame = +2
Query: 2 GGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALF 181
GG+SAGYYNT GSKEGWTPQ+FTSSRK RAE K+QS+LNFLD+DEK E++GRSL T++ F
Sbjct: 61 GGFSAGYYNTAGSKEGWTPQSFTSSRKNRAEFKQQSMLNFLDEDEKEELEGRSLGTASQF 120
Query: 182 DTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKD 361
DTFGFTAA++A+KQAEKEQ +RPSA+PGP PDEIV PA SIG+KLLLKMGWRHGHSIKD
Sbjct: 121 DTFGFTAAEIARKQAEKEQQQRPSAVPGPAPDEIVLPATESIGVKLLLKMGWRHGHSIKD 180
Query: 362 PRTNLPYDARREARKAFLAFSSDDAKPSLARFEPDEIASEGD-NEQSTDDIASASKSTPV 538
N Y ARREARKAFLAFSSDDAK EP E + + Q DD +S+STPV
Sbjct: 181 SHANSLYKARREARKAFLAFSSDDAKSQPEDSEPGEEDHKSILDHQPIDDGFPSSQSTPV 240
Query: 539 FVLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGNQELRSRGVFPLKDDLFASKSGKIAPG 718
++LNPK+D HGLG+DP+KHAPEFRE+KR RVSG + ++ +KD LF KSG+ APG
Sbjct: 241 YILNPKEDTHGLGYDPYKHAPEFREKKRTRVSGKRGSGNKQALSIKDSLFGLKSGRAAPG 300
Query: 719 FGIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKVAS 898
FGIG VYA+ Y+ E+TY+Q+ EEP N + K E+G LPGFKVAS
Sbjct: 301 FGIGALEDYDAEDEDVYATAYDIEDTYIQEDEEPLRSNTENKPKLVWKEQGVLPGFKVAS 360
Query: 899 SSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLA--GPPPPEVSLPQDKDRKLLIDGFA 1072
+SD+QLERF+PPVIP DF P HKF LE KK A PPPPEV P+D + K+LI+G A
Sbjct: 361 NSDYQLERFDPPVIPKDFLPHHKFPGPLEFDKKPATLSPPPPEVPPPEDDNSKVLIEGVA 420
Query: 1073 ALVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEE 1201
LV RCGKLFE+LSREKN++NPLFSFL+GG+GHDYY+R+LWEE
Sbjct: 421 TLVARCGKLFEDLSREKNQSNPLFSFLTGGNGHDYYSRKLWEE 463
>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 510 bits (1313), Expect = e-142
Identities = 262/423 (61%), Positives = 315/423 (74%), Gaps = 1/423 (0%)
Frame = +2
Query: 2 GGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALF 181
GG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K+QSI +FLDDDE AEM+G SL TS F
Sbjct: 61 GGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVKKQSIFSFLDDDEIAEMEGHSLGTSLQF 120
Query: 182 DTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKD 361
DTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDEIV A SIG+KLLLKMGWR G+SIKD
Sbjct: 121 DTFGFTAAELARKQAEKEQQQRPSAIPGPLPDEIVLLATESIGVKLLLKMGWRRGNSIKD 180
Query: 362 PRTNLPYDARREARKAFLAFSSDDAKPSLARFEPDEIASEGDNEQSTDDIASASKSTPVF 541
TN YDARREARKAFLA SSDD LA E + + E +D +S+STPV+
Sbjct: 181 SHTNSLYDARREARKAFLALSSDDVSTDLAVSEGVKSDLQNAIELPANDDLKSSESTPVY 240
Query: 542 VLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGNQELRSRGVFPLKDDLFASKSGKIAPGF 721
VLNPKQD+HGLG+DPFKHAPEFRE+KRLR+SG +EL LK+DLFA KS K+APGF
Sbjct: 241 VLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGKKEL------GLKNDLFAFKSRKVAPGF 294
Query: 722 GIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKVASS 901
GIG VYASGY+FE+ Y+Q++EEPS + + K E+G L GFKVAS
Sbjct: 295 GIGALEELDVEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASK 354
Query: 902 SDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAG-PPPPEVSLPQDKDRKLLIDGFAAL 1078
D+QLERF+PPV+P +F P HKF A L+ K G PPPPE P+D + KLLI+G A L
Sbjct: 355 LDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATL 414
Query: 1079 VNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPS 1258
V RCGKLFE+LSREKN++NPLFSFL+GG+G DYYAR+LWEE +D++S P+
Sbjct: 415 VARCGKLFEDLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDVKSSPT 474
Query: 1259 LQK 1267
+QK
Sbjct: 475 VQK 477
>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis vinifera]
Length = 997
Score = 510 bits (1313), Expect = e-142
Identities = 262/423 (61%), Positives = 315/423 (74%), Gaps = 1/423 (0%)
Frame = +2
Query: 2 GGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALF 181
GG+SAG+YNTVGSKEGW PQ+FTSSRK RAE K+QSI +FLDDDE AEM+G SL TS F
Sbjct: 61 GGFSAGFYNTVGSKEGWAPQSFTSSRKNRAEVKKQSIFSFLDDDEIAEMEGHSLGTSLQF 120
Query: 182 DTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKD 361
DTFGFTAA++A+KQAEKEQ +RPSAIPGP+PDEIV A SIG+KLLLKMGWR G+SIKD
Sbjct: 121 DTFGFTAAELARKQAEKEQQQRPSAIPGPLPDEIVLLATESIGVKLLLKMGWRRGNSIKD 180
Query: 362 PRTNLPYDARREARKAFLAFSSDDAKPSLARFEPDEIASEGDNEQSTDDIASASKSTPVF 541
TN YDARREARKAFLA SSDD LA E + + E +D +S+STPV+
Sbjct: 181 SHTNSLYDARREARKAFLALSSDDVSTDLAVSEGVKSDLQNAIELPANDDLKSSESTPVY 240
Query: 542 VLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGNQELRSRGVFPLKDDLFASKSGKIAPGF 721
VLNPKQD+HGLG+DPFKHAPEFRE+KRLR+SG +EL LK+DLFA KS K+APGF
Sbjct: 241 VLNPKQDLHGLGYDPFKHAPEFREKKRLRMSGKKEL------GLKNDLFAFKSRKVAPGF 294
Query: 722 GIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPSTINRDIKLIKSKDEEGALPGFKVASS 901
GIG VYASGY+FE+ Y+Q++EEPS + + K E+G L GFKVAS
Sbjct: 295 GIGALEELDVEDEDVYASGYDFEDNYIQEVEEPSGLVIESKQKLGSKEKGVLSGFKVASK 354
Query: 902 SDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAG-PPPPEVSLPQDKDRKLLIDGFAAL 1078
D+QLERF+PPV+P +F P HKF A L+ K G PPPPE P+D + KLLI+G A L
Sbjct: 355 LDYQLERFDPPVVPKNFVPHHKFHAPLDDSNKHDGDPPPPEAIAPEDNNLKLLIEGVATL 414
Query: 1079 VNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVPS 1258
V RCGKLFE+LSREKN++NPLFSFL+GG+G DYYAR+LWEE +D++S P+
Sbjct: 415 VARCGKLFEDLSREKNQSNPLFSFLTGGNGCDYYARKLWEERQKHNDKSKQLLDVKSSPT 474
Query: 1259 LQK 1267
+QK
Sbjct: 475 VQK 477
>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis sativus]
Length = 1001
Score = 499 bits (1285), Expect = e-139
Identities = 253/424 (59%), Positives = 313/424 (73%), Gaps = 2/424 (0%)
Frame = +2
Query: 2 GGYSAGYYNTVGSKEGWTPQTFTSSRKKRAETKEQSILNFLDDDEKAEMDGRSLATSALF 181
GG+SAG+YNTVGSKEGWTPQ+FTSSRK RAE K+Q+ILNFLD+DEKAE++GR L TSA F
Sbjct: 61 GGFSAGHYNTVGSKEGWTPQSFTSSRKNRAEVKQQNILNFLDEDEKAELEGRGLGTSAQF 120
Query: 182 DTFGFTAADVAQKQAEKEQLKRPSAIPGPVPDEIVRPAANSIGMKLLLKMGWRHGHSIKD 361
DTFGFTA ++A+KQA+KEQ +RPSAIPGPVPDE++ PAA SIG+KLLLKMGWRHG +IKD
Sbjct: 121 DTFGFTAVELARKQADKEQQQRPSAIPGPVPDELIVPAAESIGVKLLLKMGWRHGRAIKD 180
Query: 362 PRTNLPYDARREARKAFLAFSSDDAKPSLARFEPDEIASEGDNEQSTDDIASASKSTPVF 541
R N YDARR+ARKAFLAFS+ D K + EP + + + Q S+S+STPV+
Sbjct: 181 SRANSRYDARRDARKAFLAFSTGDVKSEIPNSEPFQEDDDIVSPQLAKGDVSSSQSTPVY 240
Query: 542 VLNPKQDMHGLGFDPFKHAPEFRERKRLRVSGNQELRSRGVFPLKDDLFASKSGKIAPGF 721
V+NPKQD+HGLGFDP+KHAPEF E+KR R +GNQE + VF K++LF ++ +IA GF
Sbjct: 241 VINPKQDLHGLGFDPYKHAPEFMEKKRARTAGNQE-GYKKVFSTKNNLFGFRTERIASGF 299
Query: 722 GIGXXXXXXXXXXXVYASGYNFEETYVQDIEEPST--INRDIKLIKSKDEEGALPGFKVA 895
GIG VY SGY FEETYVQ+ +EP + I + + + EG L GF++A
Sbjct: 300 GIGALEELDVEDEDVYTSGYEFEETYVQEEDEPPSKMITDGKQKLIGRKVEGVLLGFRIA 359
Query: 896 SSSDFQLERFNPPVIPNDFKPLHKFSAALEIGKKLAGPPPPEVSLPQDKDRKLLIDGFAA 1075
S SD+Q+ERF+PPVIP DF P HKF+ L G KLA PP EV P+D + KLLI+G A
Sbjct: 360 SKSDYQMERFDPPVIPKDFIPHHKFAGPLIGGYKLADTPPVEVPPPEDNNLKLLIEGVAT 419
Query: 1076 LVNRCGKLFEELSREKNKTNPLFSFLSGGDGHDYYARRLWEEXXXXXXXXXXXVDMESVP 1255
LV RCGKLFE+LSREKNK+NPLFSFL+GG G +YY+R+LWEE D + P
Sbjct: 420 LVARCGKLFEDLSREKNKSNPLFSFLNGGTGQEYYSRKLWEEQLKRVDQPKPQFDDKLSP 479
Query: 1256 SLQK 1267
SL+K
Sbjct: 480 SLKK 483