BLASTX nr result

ID: Coptis23_contig00008068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008068
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325526.1| predicted protein [Populus trichocarpa] gi|1...   145   4e-33
ref|XP_002891064.1| hypothetical protein ARALYDRAFT_336448 [Arab...   142   3e-32
ref|NP_001238242.1| uncharacterized protein LOC100500447 [Glycin...   141   5e-32
ref|XP_002526402.1| conserved hypothetical protein [Ricinus comm...   141   6e-32
ref|XP_002280799.1| PREDICTED: uncharacterized protein LOC100249...   138   4e-31

>ref|XP_002325526.1| predicted protein [Populus trichocarpa] gi|118484488|gb|ABK94119.1|
           unknown [Populus trichocarpa]
           gi|222862401|gb|EEE99907.1| predicted protein [Populus
           trichocarpa]
          Length = 139

 Score =  145 bits (365), Expect = 4e-33
 Identities = 77/111 (69%), Positives = 84/111 (75%)
 Frame = -1

Query: 334 SQKFKDAKMKVTKESGSDKSTMHVPGNXXXXXXXXXXXXXXXSEIDPELKYSFQRNYQFL 155
           S KFKDAK+KVT + GS   TMHVP                  EIDPEL+YSFQRN+QFL
Sbjct: 22  SNKFKDAKLKVTSQPGSTP-TMHVP-RKKSQRFDDEDDDDQALEIDPELRYSFQRNFQFL 79

Query: 154 QRVFTIDTLVKPLPPVMAYNVSRNLSFFTSIFTQFFDEKGIANAQKSLGLG 2
           QRVF+IDT+VKPLPP MAYNVSRNLSFFT IFTQFFD +GIANAQKSLGLG
Sbjct: 80  QRVFSIDTVVKPLPPAMAYNVSRNLSFFTRIFTQFFDPEGIANAQKSLGLG 130


>ref|XP_002891064.1| hypothetical protein ARALYDRAFT_336448 [Arabidopsis lyrata subsp.
           lyrata] gi|297336906|gb|EFH67323.1| hypothetical protein
           ARALYDRAFT_336448 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  142 bits (358), Expect = 3e-32
 Identities = 74/111 (66%), Positives = 81/111 (72%)
 Frame = -1

Query: 334 SQKFKDAKMKVTKESGSDKSTMHVPGNXXXXXXXXXXXXXXXSEIDPELKYSFQRNYQFL 155
           S KF +AK+KVTK+S    S MHVP                  EIDP+L+YSF RNYQFL
Sbjct: 21  SDKFSNAKLKVTKDSDG-MSKMHVPSRGTKKGSLADDDDDDSLEIDPQLRYSFNRNYQFL 79

Query: 154 QRVFTIDTLVKPLPPVMAYNVSRNLSFFTSIFTQFFDEKGIANAQKSLGLG 2
           Q VFTIDTLVKPLPP MA+NVSRNLSFFT IFTQFFD +GIANAQKSLGLG
Sbjct: 80  QSVFTIDTLVKPLPPAMAFNVSRNLSFFTRIFTQFFDPEGIANAQKSLGLG 130


>ref|NP_001238242.1| uncharacterized protein LOC100500447 [Glycine max]
           gi|255630355|gb|ACU15534.1| unknown [Glycine max]
          Length = 138

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/112 (64%), Positives = 86/112 (76%)
 Frame = -1

Query: 337 NSQKFKDAKMKVTKESGSDKSTMHVPGNXXXXXXXXXXXXXXXSEIDPELKYSFQRNYQF 158
           + + FK+ K+KVT++ G   STMHVP +                EIDPEL+YSFQRN+QF
Sbjct: 20  SEESFKEGKLKVTRQ-GDGTSTMHVPASKSKHHHHDLHDDLGI-EIDPELRYSFQRNFQF 77

Query: 157 LQRVFTIDTLVKPLPPVMAYNVSRNLSFFTSIFTQFFDEKGIANAQKSLGLG 2
           LQRVF+IDT+VKPLPPVMAYNVSRNL+FFT IFTQFFD +GIANAQKSLG+G
Sbjct: 78  LQRVFSIDTMVKPLPPVMAYNVSRNLNFFTRIFTQFFDPEGIANAQKSLGIG 129


>ref|XP_002526402.1| conserved hypothetical protein [Ricinus communis]
           gi|223534264|gb|EEF35978.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score =  141 bits (355), Expect = 6e-32
 Identities = 74/111 (66%), Positives = 83/111 (74%)
 Frame = -1

Query: 334 SQKFKDAKMKVTKESGSDKSTMHVPGNXXXXXXXXXXXXXXXSEIDPELKYSFQRNYQFL 155
           + KFKDAK+KVT + GS   TMHVP                  E+DPEL+YSFQRN+QFL
Sbjct: 23  TNKFKDAKLKVTNQPGSTP-TMHVP-RKKNRNPADDDDEDDLLELDPELRYSFQRNFQFL 80

Query: 154 QRVFTIDTLVKPLPPVMAYNVSRNLSFFTSIFTQFFDEKGIANAQKSLGLG 2
           QRVF+IDT+VKPLPP M YNVSRNLSFFT IFTQFFD +GIANAQKSLGLG
Sbjct: 81  QRVFSIDTVVKPLPPAMQYNVSRNLSFFTRIFTQFFDPEGIANAQKSLGLG 131


>ref|XP_002280799.1| PREDICTED: uncharacterized protein LOC100249874 [Vitis vinifera]
           gi|296089399|emb|CBI39218.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 3/112 (2%)
 Frame = -1

Query: 328 KFKDAKMKVTKESGSDKSTMHVPGNXXXXXXXXXXXXXXXS---EIDPELKYSFQRNYQF 158
           KF+DA+++ TK+ GS  STM+VP                     EIDPEL+YSFQRN+QF
Sbjct: 24  KFQDARLRATKQPGS-ASTMYVPRKKSVKTRPNDKDDDDDQSLSEIDPELRYSFQRNFQF 82

Query: 157 LQRVFTIDTLVKPLPPVMAYNVSRNLSFFTSIFTQFFDEKGIANAQKSLGLG 2
           LQRVF+IDT+VKPLPP MAYNVSRNLSFFT IFTQFFD +GIANAQKSLGLG
Sbjct: 83  LQRVFSIDTIVKPLPPAMAYNVSRNLSFFTRIFTQFFDPEGIANAQKSLGLG 134


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