BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008062
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p...   320   4e-85
ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2...   310   4e-82
ref|XP_002879265.1| chloroplast thylakoidal processing peptidase...   305   1e-80
gb|ACN30814.1| unknown [Zea mays]                                     301   2e-79
ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG3...   301   2e-79

>ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2,
           chloroplastic [Vitis vinifera]
           gi|147810057|emb|CAN78280.1| hypothetical protein
           VITISV_021649 [Vitis vinifera]
          Length = 368

 Score =  320 bits (820), Expect = 4e-85
 Identities = 171/276 (61%), Positives = 207/276 (75%), Gaps = 10/276 (3%)
 Frame = +2

Query: 14  VGIGALGVTSSG-SSSILGGF-----KPSSIIPFFKKLKWLPSDEPFHDCESEDYFSNTK 175
           VG+ +L  +S+G S S +G F     K +SI+PF    KWLP +EP              
Sbjct: 96  VGLISLMKSSTGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-------- 147

Query: 176 IFRDEEDRERTR----KILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSS 343
              DE D+  T+    ++++   ++ V  RS+WLSKL N CSED + + TA+TVSLL  S
Sbjct: 148 ---DEVDKGGTQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRS 204

Query: 344 YLAEPRSIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQEIGFSSGDVF 523
            LAEPRSIPS SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P  LQEIG+S+GDVF
Sbjct: 205 PLAEPRSIPSASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVF 264

Query: 524 IKRIVAKEGDYVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSF 703
           IKRIVAK GDYVEV +GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSF
Sbjct: 265 IKRIVAKAGDYVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSF 324

Query: 704 DSHNWGPLPIKNIVGRSLLRYWPPSKISNTIYEQQA 811
           DSHNWGPLPIKNIVGRS+LRYWPPSK+S+TIYE +A
Sbjct: 325 DSHNWGPLPIKNIVGRSVLRYWPPSKVSDTIYEPEA 360


>ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score =  310 bits (794), Expect = 4e-82
 Identities = 172/274 (62%), Positives = 200/274 (72%), Gaps = 7/274 (2%)
 Frame = +2

Query: 2   SSSSVGIGALGVTSSG-SSSILGG-----FKPSSIIPFFKKLKWLPSDEPFHDCESEDYF 163
           S+ +VG+ +L  +++G S S +G      FK  SI+PF +  +WLP +E      S    
Sbjct: 93  SAIAVGLVSLMKSTAGVSCSNMGACGISPFKAVSILPFLQGSRWLPCNEAVLGSRSP--- 149

Query: 164 SNTKIFRDEEDRERTRKILNDNGEKAVGGRS-SWLSKLANFCSEDGKVLVTAMTVSLLNS 340
                   E DR  T  +   + EK    +S SW S++ N CSED K + TA TVSLL  
Sbjct: 150 --------EVDRGGTGTV--KSVEKVSESKSRSWFSRVFNVCSEDAKAMFTAATVSLLFR 199

Query: 341 SYLAEPRSIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQEIGFSSGDV 520
           S LAEPRSIPS SM PTLDVGDRILAEKVSY FRKPEV+DIVIFKAP  LQE GFSSGDV
Sbjct: 200 STLAEPRSIPSSSMSPTLDVGDRILAEKVSYVFRKPEVSDIVIFKAPPILQEFGFSSGDV 259

Query: 521 FIKRIVAKEGDYVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNS 700
           FIKRIVAK GDYVEV +GKL VN ++QDEE+I EPLAYEME VLVP+GYVFVMGDNRNNS
Sbjct: 260 FIKRIVAKAGDYVEVREGKLYVNGVVQDEEFIKEPLAYEMELVLVPEGYVFVMGDNRNNS 319

Query: 701 FDSHNWGPLPIKNIVGRSLLRYWPPSKISNTIYE 802
           FDSHNWGPLPIKNIVGRS+ RYWPPSK+S+TIY+
Sbjct: 320 FDSHNWGPLPIKNIVGRSVFRYWPPSKVSDTIYD 353


>ref|XP_002879265.1| chloroplast thylakoidal processing peptidase [Arabidopsis lyrata
           subsp. lyrata] gi|297325104|gb|EFH55524.1| chloroplast
           thylakoidal processing peptidase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 339

 Score =  305 bits (781), Expect = 1e-80
 Identities = 155/259 (59%), Positives = 192/259 (74%), Gaps = 2/259 (0%)
 Frame = +2

Query: 41  SSGSSSILG--GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSNTKIFRDEEDRERTRK 214
           SS + ++LG   FK SSIIPF +  KW+ +       E +D      +  D++D+E    
Sbjct: 89  SSTTMNVLGVSSFKASSIIPFLQGSKWMKNPP-----EVDDVDKGGTLCDDDDDKESR-- 141

Query: 215 ILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTL 394
                      G S W++KL N CSED K   TA+TVS+L  S LAEP+SIPS SMYPTL
Sbjct: 142 ----------SGGSGWVNKLLNICSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTL 191

Query: 395 DVGDRILAEKVSYYFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVEVCDG 574
           DVGDR++AEKVSY+FRKPEV+DIVIFKAP  L +  +SS DVFIKRIVA EG++VEV DG
Sbjct: 192 DVGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLDYDYSSNDVFIKRIVASEGNWVEVRDG 251

Query: 575 KLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS 754
           KLLVNDI+Q+E+++LEP++YEME + VPKGYVFV+GDNRN SFDSHNWGPLPI+NIVGRS
Sbjct: 252 KLLVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRS 311

Query: 755 LLRYWPPSKISNTIYEQQA 811
           + RYWPPSK+S+TIY  QA
Sbjct: 312 VFRYWPPSKVSDTIYHDQA 330


>gb|ACN30814.1| unknown [Zea mays]
          Length = 444

 Score =  301 bits (772), Expect = 2e-79
 Identities = 152/260 (58%), Positives = 185/260 (71%), Gaps = 7/260 (2%)
 Frame = +2

Query: 44  SGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSNTKIFRDEEDRER------ 205
           SGSS I  GF P+S +PF +  +WLP  +      S        +      ++       
Sbjct: 174 SGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKKALIGAST 233

Query: 206 -TRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSM 382
            +  I   +G  A   RS+WLS+  + CS+D K    A+TV LL  S LAEP+SIPS SM
Sbjct: 234 GSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPKSIPSKSM 293

Query: 383 YPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVE 562
           YPT DVGDRILAEKVSY FR PE++DIVIF+AP  LQ  G+SSGDVFIKR+VAK GDYVE
Sbjct: 294 YPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVAKGGDYVE 353

Query: 563 VCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNI 742
           V DGKL VN ++QDE+++LEP  YEME VLVP+GYVFV+GDNRNNSFDSHNWGPLP++NI
Sbjct: 354 VRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWGPLPVRNI 413

Query: 743 VGRSLLRYWPPSKISNTIYE 802
           VGRS+LRYWPPSKI++TIYE
Sbjct: 414 VGRSILRYWPPSKINDTIYE 433


>ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG35742.1| peptidase/
           serine-type peptidase [Zea mays]
           gi|238010248|gb|ACR36159.1| unknown [Zea mays]
           gi|414885726|tpg|DAA61740.1| TPA: peptidase/ serine-type
           peptidase [Zea mays]
          Length = 396

 Score =  301 bits (772), Expect = 2e-79
 Identities = 152/260 (58%), Positives = 185/260 (71%), Gaps = 7/260 (2%)
 Frame = +2

Query: 44  SGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSNTKIFRDEEDRER------ 205
           SGSS I  GF P+S +PF +  +WLP  +      S        +      ++       
Sbjct: 126 SGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKKALIGAST 185

Query: 206 -TRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSM 382
            +  I   +G  A   RS+WLS+  + CS+D K    A+TV LL  S LAEP+SIPS SM
Sbjct: 186 GSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPKSIPSKSM 245

Query: 383 YPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQEIGFSSGDVFIKRIVAKEGDYVE 562
           YPT DVGDRILAEKVSY FR PE++DIVIF+AP  LQ  G+SSGDVFIKR+VAK GDYVE
Sbjct: 246 YPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVAKGGDYVE 305

Query: 563 VCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNI 742
           V DGKL VN ++QDE+++LEP  YEME VLVP+GYVFV+GDNRNNSFDSHNWGPLP++NI
Sbjct: 306 VRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWGPLPVRNI 365

Query: 743 VGRSLLRYWPPSKISNTIYE 802
           VGRS+LRYWPPSKI++TIYE
Sbjct: 366 VGRSILRYWPPSKINDTIYE 385