BLASTX nr result

ID: Coptis23_contig00008060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008060
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...   115   7e-24
gb|AFK45841.1| unknown [Lotus japonicus]                              113   4e-23
emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]   112   6e-23

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  136 bits (343), Expect = 4e-30
 Identities = 70/128 (54%), Positives = 91/128 (71%), Gaps = 3/128 (2%)
 Frame = +3

Query: 159 FYGSLKRYWRRRQYQRIDAAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 332
           FYGS KRYWRR++YQR D AIT  KN K  R GG  +R WKIK  PKL+    I SP+KL
Sbjct: 8   FYGSWKRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKL 67

Query: 333 MAKLRDAYINTMLGLAGNVGSLSGDNFFGGKRIPRARKISKVS-KTDVFETKLIFEIYKA 509
           M+KL++AYIN MLG+AGNV    G N FG +R+PR R++   +  ++ FE +L++EIYK 
Sbjct: 68  MSKLKNAYINMMLGMAGNV---DGTNVFGNRRVPRGRQVKAPNYPSEAFEKRLVYEIYKN 124

Query: 510 LKASRELA 533
           L A+REL+
Sbjct: 125 LLATRELS 132


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  127 bits (318), Expect = 3e-27
 Identities = 64/127 (50%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
 Frame = +3

Query: 159 FYGSLKRYWRRRQYQRIDAAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 332
           F GS KRYWRR++YQR+D AIT  KN    R GG  +RTWKIK  PKL+    I SP KL
Sbjct: 8   FNGSWKRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKL 67

Query: 333 MAKLRDAYINTMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKAL 512
           + KL++AYI+ +L +AGN     G + FG KR+PR R++     ++ FE +L++EIYK L
Sbjct: 68  LRKLKNAYISMILSVAGNA---DGTHVFGDKRVPRGRQVKAAYPSEAFEKRLVYEIYKNL 124

Query: 513 KASRELA 533
            A+REL+
Sbjct: 125 LATRELS 131


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  115 bits (289), Expect = 7e-24
 Identities = 59/124 (47%), Positives = 85/124 (68%)
 Frame = +3

Query: 162 YGSLKRYWRRRQYQRIDAAITKNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAK 341
           Y ++KRYWRR +YQR++ A  +  K  RLG  R+  WK++  PKL   ++I SPIKL+AK
Sbjct: 9   YENVKRYWRRNRYQRLNGASKRKLKIARLGSGRR--WKLRAVPKLH--MEIASPIKLLAK 64

Query: 342 LRDAYINTMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKALKAS 521
             DAYI+ ML LA N+GSL+   FF GK++ + + IS VS  D  +++L+ EIYK L AS
Sbjct: 65  FHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDSRLLLEIYKKLAAS 124

Query: 522 RELA 533
           R+++
Sbjct: 125 RDMS 128


>gb|AFK45841.1| unknown [Lotus japonicus]
          Length = 139

 Score =  113 bits (283), Expect = 4e-23
 Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
 Frame = +3

Query: 162 YGSLKRYWRRRQYQRIDAAIT---KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 332
           YG +K+YWRRR YQ ++       K    IRL G  ++ W+I+  PKL+W ++  S +K 
Sbjct: 12  YGGMKKYWRRRHYQHLNRDAPTGRKKMNIIRLKGNPRKFWRIRAIPKLRWVMR--SLLKT 69

Query: 333 MAKLRDAYINTMLGLAGNVGSLSGDNFFGG-KRIPRARKISKVSKTDVFETKLIFEIYKA 509
           +AK+++ Y+N ML LAG VG+L  D+F G  KRIP+AR++SKV   D FE + IFEI K 
Sbjct: 70  VAKVKNGYMNFMLRLAGKVGALKTDSFLGSVKRIPKARQVSKVYSGDAFEARFIFEISKT 129

Query: 510 LKASREL 530
           L AS EL
Sbjct: 130 LVASNEL 136


>emb|CAN62773.1| hypothetical protein VITISV_028724 [Vitis vinifera]
          Length = 113

 Score =  112 bits (281), Expect = 6e-23
 Identities = 51/101 (50%), Positives = 77/101 (76%)
 Frame = +3

Query: 177 RYWRRRQYQRIDAAITKNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAKLRDAY 356
           R+WRR +YQR+D A  +N K +RLGGK++R W+I+  PKL   LKI+SP+KL+AKL++AY
Sbjct: 14  RHWRRGKYQRLDVANKRNVKMVRLGGKQRRFWRIRQIPKLH--LKIISPLKLLAKLKNAY 71

Query: 357 INTMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFE 479
           ++ ML L+G+VG+L+  N FGGKR+P+AR++      + F+
Sbjct: 72  VSMMLNLSGSVGALNSGNVFGGKRVPKARQVPIAYSNEEFD 112


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