BLASTX nr result

ID: Coptis23_contig00008056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008056
         (1742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267145.2| PREDICTED: U-box domain-containing protein 3...   682   0.0  
ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 3...   668   0.0  
ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 3...   661   0.0  
ref|XP_003539260.1| PREDICTED: U-box domain-containing protein 3...   660   0.0  
ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   654   0.0  

>ref|XP_002267145.2| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 447

 Score =  682 bits (1760), Expect = 0.0
 Identities = 344/401 (85%), Positives = 374/401 (93%)
 Frame = -1

Query: 1688 EKYDLKKMIEELDLSDVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPT 1509
            EK DLK+MIEELDLS++PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGH TCPT
Sbjct: 48   EKLDLKRMIEELDLSEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHLTCPT 107

Query: 1508 TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 1329
            TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA
Sbjct: 108  TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 167

Query: 1328 LKELQKVVVNHASARKTVVDEGGVSLISSLLGPFTSHAVGSEAIGILVNLSLDSESKTNL 1149
            LKEL +VV  HA+ARKTV +EGGV+LIS+LLGPFTSHAVGSE IG+LVNL+LDSESK NL
Sbjct: 168  LKELHQVVAAHATARKTV-EEGGVALISALLGPFTSHAVGSEVIGVLVNLTLDSESKANL 226

Query: 1148 MQPAKISLMVDMLNEGSLETKISCTRLIEMLMDEKDFRSEIVSSLSLLVGLMRLVKDKRH 969
            MQPAKISLMVD+LNEGS+ETKI+ TRLIEMLM+EKDFRSEIVSS SLLVGLMRLVKDKRH
Sbjct: 227  MQPAKISLMVDLLNEGSIETKINSTRLIEMLMEEKDFRSEIVSSHSLLVGLMRLVKDKRH 286

Query: 968  SNGTSAGLSLLRTICSHKQLRNLVVSIGAVPHLIELLPCLNPDCLEYALYILDALATLPE 789
             NG   GL+LLRTIC HKQ+RNL VSIGA+P L+ELLP LNPDCLE AL+ILD L++LPE
Sbjct: 287  PNGNLPGLTLLRTICLHKQVRNLFVSIGAIPQLVELLPALNPDCLESALFILDTLSSLPE 346

Query: 788  GKSALKDCPKTIPVLVKLLMRVSESCTQYALSILWAVCKLAPEECASLAVEAGLAAKLLL 609
            G+ AL+DC  TIP +V+LLMRVSESCTQYAL+ILW+VCKLAPEEC+S+AVEAGLAAKLLL
Sbjct: 347  GRLALRDCLNTIPNMVRLLMRVSESCTQYALAILWSVCKLAPEECSSIAVEAGLAAKLLL 406

Query: 608  VIQSGCNPGLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 486
            VIQSGCNP LKQRSAELLKLCSLNYT T FISKCKLT+TIQ
Sbjct: 407  VIQSGCNPVLKQRSAELLKLCSLNYTDTTFISKCKLTKTIQ 447


>ref|XP_002285420.1| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 452

 Score =  668 bits (1724), Expect = 0.0
 Identities = 337/401 (84%), Positives = 369/401 (92%)
 Frame = -1

Query: 1688 EKYDLKKMIEELDLSDVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPT 1509
            EK DLKKMIE+LD  DVPSVFICPISLEPMQDPVT+CTGQTYERSNI+KWFS+GHFTCPT
Sbjct: 52   EKLDLKKMIEDLDSIDVPSVFICPISLEPMQDPVTICTGQTYERSNIVKWFSMGHFTCPT 111

Query: 1508 TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 1329
            TMQELWDDS+TPNKTLY LIYSWFSQKYL+MKKRSEDVQGRA E+LETLKKVKGQAR+QA
Sbjct: 112  TMQELWDDSITPNKTLYQLIYSWFSQKYLVMKKRSEDVQGRALEVLETLKKVKGQARIQA 171

Query: 1328 LKELQKVVVNHASARKTVVDEGGVSLISSLLGPFTSHAVGSEAIGILVNLSLDSESKTNL 1149
            LKEL++VV  HASA+KTV D GG+ LISSLLGPFTSHAVGSE IGILVNLSLDSESK+NL
Sbjct: 172  LKELRQVVSIHASAKKTVADNGGIGLISSLLGPFTSHAVGSEVIGILVNLSLDSESKSNL 231

Query: 1148 MQPAKISLMVDMLNEGSLETKISCTRLIEMLMDEKDFRSEIVSSLSLLVGLMRLVKDKRH 969
            MQPAKISLMVDMLNEGS+ETKI+CT+LIE+LM+ +DF SEIV SLSLLVGL+RLVKDKRH
Sbjct: 232  MQPAKISLMVDMLNEGSIETKINCTKLIEILMEGRDFESEIVPSLSLLVGLLRLVKDKRH 291

Query: 968  SNGTSAGLSLLRTICSHKQLRNLVVSIGAVPHLIELLPCLNPDCLEYALYILDALATLPE 789
             NG  AGL+LL+TIC H+ +RN VVSIGAVP L+ELLP LNP CLE ALYIL+ L+TLP+
Sbjct: 292  QNGILAGLALLKTICLHEPVRNSVVSIGAVPQLVELLPNLNPACLELALYILEVLSTLPQ 351

Query: 788  GKSALKDCPKTIPVLVKLLMRVSESCTQYALSILWAVCKLAPEECASLAVEAGLAAKLLL 609
            G+ ALKDCP  IP +VKLLMRVSESCTQ AL+IL AVCKLAPEECASLAVEAGLAAKLLL
Sbjct: 352  GRLALKDCPNMIPNVVKLLMRVSESCTQLALAILSAVCKLAPEECASLAVEAGLAAKLLL 411

Query: 608  VIQSGCNPGLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 486
            VIQSGCNP LKQR+AELLKLCSLNYTATIFISKCKLTRTIQ
Sbjct: 412  VIQSGCNPVLKQRAAELLKLCSLNYTATIFISKCKLTRTIQ 452


>ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 449

 Score =  661 bits (1705), Expect = 0.0
 Identities = 325/401 (81%), Positives = 371/401 (92%)
 Frame = -1

Query: 1688 EKYDLKKMIEELDLSDVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPT 1509
            EK DL KMIEEL+L +VPSVFICPISLEPMQDP+TLCTGQTYERSNILKWF+LGHFTCPT
Sbjct: 49   EKVDLGKMIEELELCEVPSVFICPISLEPMQDPITLCTGQTYERSNILKWFNLGHFTCPT 108

Query: 1508 TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 1329
            TMQELWDDSVTPN TLY LI++WFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA
Sbjct: 109  TMQELWDDSVTPNTTLYRLIHTWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 168

Query: 1328 LKELQKVVVNHASARKTVVDEGGVSLISSLLGPFTSHAVGSEAIGILVNLSLDSESKTNL 1149
            LKE+ ++V +HA+ARK V+DEGGVS++SSLLGPFTSHAVGSE IGILV L+LDSES+ NL
Sbjct: 169  LKEIHQLVASHATARKAVIDEGGVSVVSSLLGPFTSHAVGSEVIGILVTLTLDSESRKNL 228

Query: 1148 MQPAKISLMVDMLNEGSLETKISCTRLIEMLMDEKDFRSEIVSSLSLLVGLMRLVKDKRH 969
            +QPAK+SLMVD+LNEGS+ETKI+CTRLIE L++EKDFRSE++SS SLLVGLMRLVKDKRH
Sbjct: 229  LQPAKVSLMVDILNEGSIETKINCTRLIESLIEEKDFRSEVISSHSLLVGLMRLVKDKRH 288

Query: 968  SNGTSAGLSLLRTICSHKQLRNLVVSIGAVPHLIELLPCLNPDCLEYALYILDALATLPE 789
            SNG   GLSLLRTIC HK++RNL+VSIGAV  L+ELL  + PDC E AL +LDALA++PE
Sbjct: 289  SNGVCPGLSLLRTICLHKEVRNLLVSIGAVSQLVELLSGMEPDCTELALCVLDALASVPE 348

Query: 788  GKSALKDCPKTIPVLVKLLMRVSESCTQYALSILWAVCKLAPEECASLAVEAGLAAKLLL 609
            G+ ALKDC  TIP++VKLLMR+SE+CTQYALSILW+VCKL+P+EC+S+AV+AGLAAKLLL
Sbjct: 349  GRVALKDCSNTIPIMVKLLMRISENCTQYALSILWSVCKLSPDECSSIAVDAGLAAKLLL 408

Query: 608  VIQSGCNPGLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 486
            VIQSGCNP LKQ+SAELLKLCSLNY+ TIFISKCKLTRTIQ
Sbjct: 409  VIQSGCNPILKQQSAELLKLCSLNYSDTIFISKCKLTRTIQ 449


>ref|XP_003539260.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 449

 Score =  660 bits (1702), Expect = 0.0
 Identities = 326/401 (81%), Positives = 370/401 (92%)
 Frame = -1

Query: 1688 EKYDLKKMIEELDLSDVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPT 1509
            EK DL KMIEEL+L +VPSVFICPISLEPMQDPVTLCTGQTYERSNILKWF+LGHFTCPT
Sbjct: 49   EKVDLGKMIEELELCEVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNLGHFTCPT 108

Query: 1508 TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 1329
            TMQELWDDSVTPN TLY LI+ WFSQKYLLMKKRSEDVQGRASELLETLKKVK QARVQA
Sbjct: 109  TMQELWDDSVTPNTTLYRLIHMWFSQKYLLMKKRSEDVQGRASELLETLKKVKSQARVQA 168

Query: 1328 LKELQKVVVNHASARKTVVDEGGVSLISSLLGPFTSHAVGSEAIGILVNLSLDSESKTNL 1149
            LKEL ++V +HA+ARKTV+DEGGVS++SSLLGPFTSHAVGSE IGILV L+LDSES+ NL
Sbjct: 169  LKELHQLVASHATARKTVIDEGGVSVVSSLLGPFTSHAVGSEVIGILVTLTLDSESRKNL 228

Query: 1148 MQPAKISLMVDMLNEGSLETKISCTRLIEMLMDEKDFRSEIVSSLSLLVGLMRLVKDKRH 969
            +QPAK+SLMVD+LNEGS+ETKI+CTRLIE L++EKDFRSE++ S SLLVGLMRLVKDKRH
Sbjct: 229  LQPAKVSLMVDILNEGSIETKINCTRLIESLIEEKDFRSEVILSHSLLVGLMRLVKDKRH 288

Query: 968  SNGTSAGLSLLRTICSHKQLRNLVVSIGAVPHLIELLPCLNPDCLEYALYILDALATLPE 789
            +NG   GLSLLRTIC HK++RNL+VSIGAV  L+ELL  + PDCLE AL +LDALA++PE
Sbjct: 289  NNGVCPGLSLLRTICLHKEVRNLLVSIGAVSQLVELLSGMEPDCLELALCVLDALASVPE 348

Query: 788  GKSALKDCPKTIPVLVKLLMRVSESCTQYALSILWAVCKLAPEECASLAVEAGLAAKLLL 609
            G+ ALKDC  TIP++VKLLMR+SE+CTQYALSILW+VCKL+PEEC+S+AV+AGLAAKLLL
Sbjct: 349  GRVALKDCSNTIPIMVKLLMRISENCTQYALSILWSVCKLSPEECSSIAVDAGLAAKLLL 408

Query: 608  VIQSGCNPGLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 486
            VIQSGCNP LKQ+SAELLKLCSLNY+ TIF+SKCKLTRTIQ
Sbjct: 409  VIQSGCNPILKQQSAELLKLCSLNYSDTIFLSKCKLTRTIQ 449


>ref|XP_002510071.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
            gi|223550772|gb|EEF52258.1| E3 ubiquitin ligase PUB14,
            putative [Ricinus communis]
          Length = 451

 Score =  654 bits (1686), Expect = 0.0
 Identities = 329/401 (82%), Positives = 362/401 (90%)
 Frame = -1

Query: 1688 EKYDLKKMIEELDLSDVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPT 1509
            EK DLKKMIEEL+  DVPSVFICPISL+PMQDPVTLCTGQTYERSNILKWF  GH+TCPT
Sbjct: 51   EKLDLKKMIEELESLDVPSVFICPISLDPMQDPVTLCTGQTYERSNILKWFCFGHYTCPT 110

Query: 1508 TMQELWDDSVTPNKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQARVQA 1329
            TMQELWD++VTPN+TL  LIYSWFSQKYL MKKRSEDVQGRA E+LETLKKVKGQARVQA
Sbjct: 111  TMQELWDNTVTPNRTLQQLIYSWFSQKYLAMKKRSEDVQGRAIEILETLKKVKGQARVQA 170

Query: 1328 LKELQKVVVNHASARKTVVDEGGVSLISSLLGPFTSHAVGSEAIGILVNLSLDSESKTNL 1149
            LKEL++VV  HA+ARKTV+D GGV+ +S+LLGPFT+HAVGSEAIGILVNL LD  SK NL
Sbjct: 171  LKELRQVVTAHATARKTVLDNGGVATVSNLLGPFTTHAVGSEAIGILVNLDLDFASKENL 230

Query: 1148 MQPAKISLMVDMLNEGSLETKISCTRLIEMLMDEKDFRSEIVSSLSLLVGLMRLVKDKRH 969
            MQPAKISLMVDMLNEGS+ETKI+CTRLIEMLM+ KDF SE VSSLSLLVGL+RLVKDKRH
Sbjct: 231  MQPAKISLMVDMLNEGSIETKINCTRLIEMLMEGKDFESENVSSLSLLVGLLRLVKDKRH 290

Query: 968  SNGTSAGLSLLRTICSHKQLRNLVVSIGAVPHLIELLPCLNPDCLEYALYILDALATLPE 789
             NG  AGL LL+ +CSH+ LRN VVSIGA+P L+ELLP LN +CLE AL+IL+ L+T+PE
Sbjct: 291  PNGVLAGLGLLKNLCSHESLRNSVVSIGAIPQLVELLPSLNNECLELALHILEVLSTIPE 350

Query: 788  GKSALKDCPKTIPVLVKLLMRVSESCTQYALSILWAVCKLAPEECASLAVEAGLAAKLLL 609
            G +ALKDC  TIP +VKLLM+VSESCTQ ALSILW VCKLAPEECA+LAVEAGLAAKLLL
Sbjct: 351  GSNALKDCALTIPNVVKLLMKVSESCTQLALSILWTVCKLAPEECAALAVEAGLAAKLLL 410

Query: 608  VIQSGCNPGLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 486
            VIQSGCNP LKQRSAELLKLCSLNYTATIFISKCKLTRTIQ
Sbjct: 411  VIQSGCNPVLKQRSAELLKLCSLNYTATIFISKCKLTRTIQ 451


Top