BLASTX nr result

ID: Coptis23_contig00008051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008051
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   142   2e-60
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              142   2e-60
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   142   3e-58
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-42
ref|XP_002516947.1| conserved hypothetical protein [Ricinus comm...    97   6e-37

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  142 bits (357), Expect(2) = 2e-60
 Identities = 73/132 (55%), Positives = 97/132 (73%)
 Frame = +3

Query: 351  KLQKNLLALSVYLSSPPNDLIASQEMASELLKVMGSEHCDPIETSETYPVISHATKSAIA 530
            K+ KNL+ L++ LSSPP+DLI +QEMA ELLKVMGSE  +P+ETSETY +I+H+T SA+A
Sbjct: 1054 KVAKNLVDLAICLSSPPDDLIVAQEMAKELLKVMGSESSNPLETSETYAIINHSTTSAVA 1113

Query: 531  STLLHLVDSIIVDVSWCITKLKTFSSFTRGAVSIDQQGDEEKSTALILEEALYLRSEGLV 710
            S++L  ++S+IVD+ W   KLKTFS  T    S+D  G    + AL LEE LY R+E LV
Sbjct: 1114 SSILEFIESVIVDMDWATAKLKTFSPVTLETASLDLNGGH--APALSLEETLYSRAEALV 1171

Query: 711  NLLSSFAHMSLK 746
             +LSSF  M++K
Sbjct: 1172 RVLSSFVLMNMK 1183



 Score =  117 bits (293), Expect(2) = 2e-60
 Identities = 54/123 (43%), Positives = 83/123 (67%)
 Frame = +2

Query: 2    LIGLSLHTPQLTGLIEDLMSMSSDENVVGNGIDAHKDNDCELISGIEDQKTKNVQLFLEK 181
            LI + L  P  T L+EDL+S+S+ E  + N  D   D++CE+ SG +DQ  K+  L +++
Sbjct: 938  LIKICLQNPHQTSLLEDLVSLSTVEYPLRNVADVGSDDECEIASGTDDQNIKSKVLLIKR 997

Query: 182  TLKPLLAELLHMSLHRESEVLSDIILMLGNKLPCNIRNYNGAWALNLCRTTALEDPKTAK 361
             ++PL +ELL +S  RE E+L DI++M+GNKLPC  RN++GAWA+ +C T+ + + K AK
Sbjct: 998  CVRPLFSELLGLSFVREVEILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAK 1057

Query: 362  KFV 370
              V
Sbjct: 1058 NLV 1060


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  142 bits (357), Expect(2) = 2e-60
 Identities = 73/132 (55%), Positives = 97/132 (73%)
 Frame = +3

Query: 351  KLQKNLLALSVYLSSPPNDLIASQEMASELLKVMGSEHCDPIETSETYPVISHATKSAIA 530
            K+ KNL+ L++ LSSPP+DLI +QEMA ELLKVMGSE  +P+ETSETY +I+H+T SA+A
Sbjct: 1022 KVAKNLVDLAICLSSPPDDLIVAQEMAKELLKVMGSESSNPLETSETYAIINHSTTSAVA 1081

Query: 531  STLLHLVDSIIVDVSWCITKLKTFSSFTRGAVSIDQQGDEEKSTALILEEALYLRSEGLV 710
            S++L  ++S+IVD+ W   KLKTFS  T    S+D  G    + AL LEE LY R+E LV
Sbjct: 1082 SSILEFIESVIVDMDWATAKLKTFSPVTLETASLDLNGGH--APALSLEETLYSRAEALV 1139

Query: 711  NLLSSFAHMSLK 746
             +LSSF  M++K
Sbjct: 1140 RVLSSFVLMNMK 1151



 Score =  117 bits (293), Expect(2) = 2e-60
 Identities = 54/123 (43%), Positives = 83/123 (67%)
 Frame = +2

Query: 2    LIGLSLHTPQLTGLIEDLMSMSSDENVVGNGIDAHKDNDCELISGIEDQKTKNVQLFLEK 181
            LI + L  P  T L+EDL+S+S+ E  + N  D   D++CE+ SG +DQ  K+  L +++
Sbjct: 906  LIKICLQNPHQTSLLEDLVSLSTVEYPLRNVADVGSDDECEIASGTDDQNIKSKVLLIKR 965

Query: 182  TLKPLLAELLHMSLHRESEVLSDIILMLGNKLPCNIRNYNGAWALNLCRTTALEDPKTAK 361
             ++PL +ELL +S  RE E+L DI++M+GNKLPC  RN++GAWA+ +C T+ + + K AK
Sbjct: 966  CVRPLFSELLGLSFVREVEILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGITNSKVAK 1025

Query: 362  KFV 370
              V
Sbjct: 1026 NLV 1028


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  142 bits (357), Expect(2) = 3e-58
 Identities = 73/132 (55%), Positives = 97/132 (73%)
 Frame = +3

Query: 351  KLQKNLLALSVYLSSPPNDLIASQEMASELLKVMGSEHCDPIETSETYPVISHATKSAIA 530
            K+ KNL+ L++ LSSPP+DLI +QEMA ELLKVMGSE  +P+ETSETY +I+H+T SA+A
Sbjct: 1075 KVAKNLVDLAICLSSPPDDLIVAQEMAKELLKVMGSESSNPLETSETYAIINHSTTSAVA 1134

Query: 531  STLLHLVDSIIVDVSWCITKLKTFSSFTRGAVSIDQQGDEEKSTALILEEALYLRSEGLV 710
            S++L  ++S+IVD+ W   KLKTFS  T    S+D  G    + AL LEE LY R+E LV
Sbjct: 1135 SSILEFIESVIVDMDWATAKLKTFSPVTLETASLDLNGGH--APALSLEETLYSRAEALV 1192

Query: 711  NLLSSFAHMSLK 746
             +LSSF  M++K
Sbjct: 1193 RVLSSFVLMNMK 1204



 Score =  110 bits (274), Expect(2) = 3e-58
 Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 11/134 (8%)
 Frame = +2

Query: 2    LIGLSLHTPQLTGLIEDLMSMSSDENVVGNGIDAHKDNDCELISGIEDQKTKNVQLFLEK 181
            LI + L  P  T L+EDL+S+S+ E  + N  D   D++CE+ SG +DQ  K+  L +++
Sbjct: 948  LIKICLQNPHQTSLLEDLVSLSTVEYPLRNVADVGSDDECEIASGTDDQNIKSKVLLIKR 1007

Query: 182  TLKPLLAELLHMSLHRE-----------SEVLSDIILMLGNKLPCNIRNYNGAWALNLCR 328
             ++PL +ELL +S  RE           S++L DI++M+GNKLPC  RN++GAWA+ +C 
Sbjct: 1008 CVRPLFSELLGLSFLREVEQSHLKRFVSSQILCDIVMMIGNKLPCKWRNFHGAWAVRICN 1067

Query: 329  TTALEDPKTAKKFV 370
            T+ + + K AK  V
Sbjct: 1068 TSGITNSKVAKNLV 1081


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score =  103 bits (258), Expect(2) = 7e-42
 Identities = 56/132 (42%), Positives = 87/132 (65%)
 Frame = +3

Query: 351  KLQKNLLALSVYLSSPPNDLIASQEMASELLKVMGSEHCDPIETSETYPVISHATKSAIA 530
            K  ++++AL++ LSSPP+DLI +Q+MA ELLKV GSE  +  E S ++ +I+ +T S+I 
Sbjct: 1067 KAARSVVALAISLSSPPSDLIVAQDMAKELLKVTGSETSNAEEVSGSHSIINQSTSSSII 1126

Query: 531  STLLHLVDSIIVDVSWCITKLKTFSSFTRGAVSIDQQGDEEKSTALILEEALYLRSEGLV 710
            S +  L+++IIVD+ W I KL  F+  ++ ++   Q  +EE  T L  E  LY R+E +V
Sbjct: 1127 SCIQKLIEAIIVDMDWAIKKLNIFTLVSQKSIHFSQ--NEEHITGLEYENNLYSRAEAVV 1184

Query: 711  NLLSSFAHMSLK 746
             +LS F  M+LK
Sbjct: 1185 KVLSCFVSMNLK 1196



 Score = 93.6 bits (231), Expect(2) = 7e-42
 Identities = 49/124 (39%), Positives = 79/124 (63%)
 Frame = +2

Query: 2    LIGLSLHTPQLTGLIEDLMSMSSDENVVGNGIDAHKDNDCELISGIEDQKTKNVQLFLEK 181
            L+ +SL  P LTGL+EDL+S+S+ E           D+  E  S I+DQ  +  +LF+ K
Sbjct: 958  LVTISLQNPHLTGLLEDLVSVSTLEY-------PELDDKYEEASRIDDQHIRIKELFVVK 1010

Query: 182  TLKPLLAELLHMSLHRESEVLSDIILMLGNKLPCNIRNYNGAWALNLCRTTALEDPKTAK 361
             LKPL +ELL  S   E E++SD++L++G KLP   RN +GAW++++C++  +++ K A+
Sbjct: 1011 VLKPLFSELLAQSYFHELEIISDMLLVIGEKLPRKQRNSHGAWSIHVCKSNVIKNSKAAR 1070

Query: 362  KFVS 373
              V+
Sbjct: 1071 SVVA 1074


>ref|XP_002516947.1| conserved hypothetical protein [Ricinus communis]
            gi|223544035|gb|EEF45561.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1357

 Score = 97.1 bits (240), Expect(2) = 6e-37
 Identities = 55/135 (40%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
 Frame = +3

Query: 351  KLQKNLLALSVYLSSPPNDLIASQEMASELLKV---MGSEHCDPIETSETYPVISHATKS 521
            K+ +++ AL++ LSSP +DLI + +M+ ELL V   +G E   P+E SE+ P+I+ +T +
Sbjct: 1016 KVARSVAALAISLSSP-DDLIVAHDMSKELLDVTGFIGPESNKPLEISESCPIINQSTST 1074

Query: 522  AIASTLLHLVDSIIVDVSWCITKLKTFSSFTRGAVSIDQQGDEEKSTALILEEALYLRSE 701
            AI+S +L L++++I D+ W I KLKTF    +  + + Q G  E +  L +E+ LYLR+E
Sbjct: 1075 AISSCILKLIEAVINDMDWTIKKLKTFFLIEQRYIHVSQSG--EHAPGLTVEDNLYLRAE 1132

Query: 702  GLVNLLSSFAHMSLK 746
             +V +LS F  M+LK
Sbjct: 1133 AVVKVLSFFVLMNLK 1147



 Score = 84.0 bits (206), Expect(2) = 6e-37
 Identities = 45/120 (37%), Positives = 72/120 (60%)
 Frame = +2

Query: 2    LIGLSLHTPQLTGLIEDLMSMSSDENVVGNGIDAHKDNDCELISGIEDQKTKNVQLFLEK 181
            LI +SL     +GL+EDL+S+S+        ++   D + E  S I+D + +   L + K
Sbjct: 908  LIAISLKNSNSSGLLEDLLSVST--------LEYELDEEFEEASRIDDHQIRIKVLLIVK 959

Query: 182  TLKPLLAELLHMSLHRESEVLSDIILMLGNKLPCNIRNYNGAWALNLCRTTALEDPKTAK 361
             L+PL AELL  S   E E+L DI+LM+G+KLP   RN +G+W +N+C++  + + K A+
Sbjct: 960  ILRPLFAELLAQSSFNEIEILCDIMLMVGDKLPSKWRNSSGSWGINVCKSHGIRNSKVAR 1019


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