BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008036
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   132   4e-29
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   122   6e-26
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   122   6e-26
ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   118   8e-25
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   117   1e-24

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  132 bits (332), Expect = 4e-29
 Identities = 80/193 (41%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
 Frame = +2

Query: 47  DCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESDQYKKLFQ 226
           DCAVCLSKFEPHDQLRLLP+CCHAFH  CIDTWL SN TCPLCRS I   E+D  K +  
Sbjct: 122 DCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADFMKAILA 181

Query: 227 ETNNNNNTSFRVQMGNVXXXXXXXXXXXXXXIGS--SFEYL---------XXXXXXXXXX 373
            TN  +  SFR+++G+V                S  SF+Y+                   
Sbjct: 182 STNAGD--SFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEVTVASTHRRGGSE 239

Query: 374 XXXXXXXXXXXXXXXXTIIPVGPGDDVAGEV--GRGWLKEYVDRLAXXXXXXXXXXXXXX 547
                            + P  PG   A EV  GR WLK+YVDRL+              
Sbjct: 240 SSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGRSWLKDYVDRLSSTASLSISSRALSF 299

Query: 548 XXXFRFFTGSSRR 586
               RFFTGSSRR
Sbjct: 300 RSSGRFFTGSSRR 312


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  122 bits (305), Expect = 6e-26
 Identities = 74/194 (38%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
 Frame = +2

Query: 47  DCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESDQYKKLFQ 226
           DCAVCLSKFEP +QLRLLPLCCHAFH  CID WL SN TCPLCRS +   ESD  K L  
Sbjct: 117 DCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLVG 176

Query: 227 ETNNNN--NTSFRVQMGNVXXXXXXXXXXXXXXIGSSFEYL-----XXXXXXXXXXXXXX 385
             NN+N    SFR+++G++                 SF+Y+                   
Sbjct: 177 GNNNSNGGENSFRLEIGSISRRQTESVEQHRSYSIGSFDYIVDDVDSEISESNFNRGSIS 236

Query: 386 XXXXXXXXXXXXTIIPVGPGD-------DVAGEVGRGWLKEYVDRLAXXXXXXXXXXXXX 544
                       T +   P         D+  +  R WLK+YVDRL+             
Sbjct: 237 AKQEDATTTTTATAVTSNPASFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFRSS 296

Query: 545 XXXXFRFFTGSSRR 586
                RFFTGSSRR
Sbjct: 297 G----RFFTGSSRR 306


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  122 bits (305), Expect = 6e-26
 Identities = 75/183 (40%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
 Frame = +2

Query: 47  DCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESDQYKKLFQ 226
           DCAVCLSKFEP DQLRLLPLCCHAFH+ CIDTWL SN TCPLCRS IH  +SD  K L  
Sbjct: 118 DCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTCPLCRSPIHASDSDLLKSLSP 177

Query: 227 ETNNNNNTSFRVQMGNVXXXXXXXXXXXXXXIGSSFEYLXXXXXXXXXXXXXXXXXXXXX 406
           +       SFR+++G++              +G SFEY+                     
Sbjct: 178 DAAPPE--SFRLEIGSISRRQTASEPRSSYSVG-SFEYVVDEDSEVTMSQTHRRSVSDKE 234

Query: 407 XXXXXTIIPVGPGDDVAGEV---GRGWLKEYVDRLAXXXXXXXXXXXXXXXXXFRFFTGS 577
                         ++A +V   GR WLK+YVDRL+                  R FTGS
Sbjct: 235 GGTHSR-----QDSNLASQVSGGGRSWLKDYVDRLSSSLSFRSSG---------RLFTGS 280

Query: 578 SRR 586
           SRR
Sbjct: 281 SRR 283


>ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
          Length = 359

 Score =  118 bits (295), Expect = 8e-25
 Identities = 71/164 (43%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
 Frame = +2

Query: 47  DCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESDQYKKLFQ 226
           DCAVCLSKF  HD LRLLPLCCHAFH  CIDTWLQSN +CPLCRSTI   +SD  K L  
Sbjct: 138 DCAVCLSKFHHHDLLRLLPLCCHAFHAECIDTWLQSNLSCPLCRSTIVADDSDLAKILRP 197

Query: 227 ETNNNNNTSFRVQMGNVXXXXXXXXXXXXXXI--GS------SFEYLXXXXXXXXXXXXX 382
            ++  ++ SFR+++GN+                 GS      SFEYL             
Sbjct: 198 PSSAGSSDSFRLELGNISRRGTDGAAEGGSVARGGSRSYSIGSFEYLIDDESEVPFSHAR 257

Query: 383 XXXXXXXXXXXXXTIIPVGPGD-DVAGEVG--RGWLKEYVDRLA 505
                           PV   +  +AGEVG  R WLKEY+DR++
Sbjct: 258 RRSVDDAKEFPAPAEAPVSHNEASLAGEVGGVRSWLKEYMDRVS 301


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  117 bits (293), Expect = 1e-24
 Identities = 76/196 (38%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
 Frame = +2

Query: 47  DCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESDQYKKLFQ 226
           DCAVCLSKFEP DQLRLLPLCCHAFH  CID WL SN TCPLCRS +   ESD  K L  
Sbjct: 55  DCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAV 114

Query: 227 ETNNN--NNTSFRVQMGNV-----XXXXXXXXXXXXXXIGSSFEYLXXXXXXXXXXXXXX 385
             +NN     SFR+++G++                   IG SF+Y+              
Sbjct: 115 VGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSIG-SFDYIVDDVDSEISESNFN 173

Query: 386 XXXXXXXXXXXXTIIPVGPGD---------DVAGEVGRGWLKEYVDRLAXXXXXXXXXXX 538
                       T   V             D+  +  R WLK+YVDRL+           
Sbjct: 174 RGKQEDATTTTATATAVTTNPTSFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFR 233

Query: 539 XXXXXXFRFFTGSSRR 586
                  RFFTGSSRR
Sbjct: 234 SSG----RFFTGSSRR 245