BLASTX nr result

ID: Coptis23_contig00008029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008029
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]                204   8e-51
ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]...   202   2e-50
ref|XP_002270383.1| PREDICTED: xyloglucan galactosyltransferase ...   202   3e-50

>ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|222847710|gb|EEE85257.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  206 bits (525), Expect = 2e-51
 Identities = 107/162 (66%), Positives = 121/162 (74%), Gaps = 9/162 (5%)
 Frame = +2

Query: 2   IRDEILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSV 181
           +RDE++RQCS S  C LLKC +G SKCH+P +VLKVM++SQFCLQAPGDSFTRRSTFDSV
Sbjct: 232 VRDELIRQCSESGRCKLLKCGKGPSKCHDPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSV 291

Query: 182 LAGCIPVFFSSHTAYTQYAWYLPQ-DKSEYSVYFPE--------EDRGAIIEEALRKIPK 334
           LAGCIPVFFS HT YTQY W+ P  D  EYSVY  E          R   IEE L KI +
Sbjct: 292 LAGCIPVFFSPHTVYTQYEWFFPAGDAREYSVYIDENALKTGNGSKRVVSIEEELFKIER 351

Query: 335 EKVEKMRSTVISLIPRLTYMHPNATTTHFQFKDAVDIALEQL 460
           EKVE+MRS VI+L+PRLTY HPNAT   FQ  DAVD+ALE L
Sbjct: 352 EKVERMRSAVINLMPRLTYAHPNATDLGFQ--DAVDVALEAL 391


>dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]
          Length = 455

 Score =  204 bits (519), Expect = 8e-51
 Identities = 100/160 (62%), Positives = 119/160 (74%)
 Frame = +2

Query: 2   IRDEILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSV 181
           IRDE+++QC+ S  C LLKCE G S+CHNP  VL VM +S+FCLQAPGDSFTRRSTFD++
Sbjct: 294 IRDELIKQCAESSHCELLKCENGGSRCHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAM 353

Query: 182 LAGCIPVFFSSHTAYTQYAWYLPQDKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRST 361
           LAGCIPVFFS HT YTQY WYLP DK  YSV F +E   A IE+ L +I + +V +MR  
Sbjct: 354 LAGCIPVFFSPHTMYTQYMWYLPDDKRSYSV-FMDEKNNAHIEQELLRISENEVVQMREI 412

Query: 362 VISLIPRLTYMHPNATTTHFQFKDAVDIALEQLSKHINSN 481
           VI LIPRLTY HPN  +T++   DAVDIALE L+K    N
Sbjct: 413 VIDLIPRLTYAHPN--STNYDLPDAVDIALEALAKQARDN 450


>ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|222873674|gb|EEF10805.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  204 bits (518), Expect = 1e-50
 Identities = 106/162 (65%), Positives = 120/162 (74%), Gaps = 9/162 (5%)
 Frame = +2

Query: 2   IRDEILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSV 181
           +RDE++RQCS S  C LLKC +G SKCH P +VLKVM++SQFCLQAPGDSFTRRSTFDSV
Sbjct: 253 VRDELIRQCSESGRCKLLKCGKGPSKCHYPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSV 312

Query: 182 LAGCIPVFFSSHTAYTQYAWYLPQ-DKSEYSVYFPE--------EDRGAIIEEALRKIPK 334
           LAGCIPVFFS HT YTQY W+ P  D  EYSVY  E          R   IEE L KI +
Sbjct: 313 LAGCIPVFFSPHTVYTQYEWFFPAGDAREYSVYIDENALKTGNGSKRVVSIEEELFKIER 372

Query: 335 EKVEKMRSTVISLIPRLTYMHPNATTTHFQFKDAVDIALEQL 460
           E+VE+MRS VI+L+PRLTY HPNAT   FQ  DAVD+ALE L
Sbjct: 373 EQVERMRSAVINLMPRLTYAHPNATDLGFQ--DAVDVALEAL 412


>ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]
           gi|12324886|gb|AAG52396.1|AC011915_10 hypothetical
           protein; 19613-17891 [Arabidopsis thaliana]
           gi|332196676|gb|AEE34797.1| Exostosin family protein
           [Arabidopsis thaliana]
          Length = 455

 Score =  202 bits (515), Expect = 2e-50
 Identities = 99/160 (61%), Positives = 118/160 (73%)
 Frame = +2

Query: 2   IRDEILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSV 181
           IRDE+++QC+ S  C LLKCE G S+CHNP  VL VM +S+FCLQAPGDSFTRRSTFD++
Sbjct: 294 IRDELIKQCAESSHCELLKCENGGSRCHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAM 353

Query: 182 LAGCIPVFFSSHTAYTQYAWYLPQDKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRST 361
           LAGCIPVFFS HT YTQY WYLP DK  YSV F +E     IE+ L +I + +V +MR  
Sbjct: 354 LAGCIPVFFSPHTMYTQYMWYLPDDKRSYSV-FMDEKNNTHIEQELLRISENEVVQMREI 412

Query: 362 VISLIPRLTYMHPNATTTHFQFKDAVDIALEQLSKHINSN 481
           VI LIPRLTY HPN  +T++   DAVDIALE L+K    N
Sbjct: 413 VIDLIPRLTYAHPN--STNYDLPDAVDIALEALAKQARDN 450


>ref|XP_002270383.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog
           [Vitis vinifera]
          Length = 511

 Score =  202 bits (514), Expect = 3e-50
 Identities = 95/159 (59%), Positives = 125/159 (78%)
 Frame = +2

Query: 2   IRDEILRQCSSSQECYLLKCERGASKCHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSV 181
           IRDE+++QC+ S  C+LLKC  GAS+CH P+ VL VMT+S+FC+QAPGDSFTRRSTFDS 
Sbjct: 347 IRDEVIKQCAESARCHLLKCGSGASQCHEPTQVLNVMTQSEFCIQAPGDSFTRRSTFDSF 406

Query: 182 LAGCIPVFFSSHTAYTQYAWYLPQDKSEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRST 361
           LAGCIPVF S HTAY+QY+W+LP D + YSV+  +E+    IE  L KIP ++++KMR+ 
Sbjct: 407 LAGCIPVFVSPHTAYSQYSWFLPSDHTTYSVFIGDENPS--IEAELLKIPNDQIQKMRNR 464

Query: 362 VISLIPRLTYMHPNATTTHFQFKDAVDIALEQLSKHINS 478
           VI+LIP LTY+HPN  ++ F F DAVD+AL +LS ++ S
Sbjct: 465 VINLIPNLTYIHPN--SSDFGFTDAVDVALGKLSDYVKS 501


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