BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008025
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   141   5e-31
ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein...   141   5e-31
ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Bra...   139   1e-30
ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-26
emb|CBI26021.3| unnamed protein product [Vitis vinifera]              125   3e-26

>ref|XP_003565630.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like
           [Brachypodium distachyon]
          Length = 520

 Score =  141 bits (355), Expect = 5e-31
 Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 32/330 (9%)
 Frame = +1

Query: 103 DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 279
           DR+S LPD +L SI+  +P K A+R++ LS+RW  LW +    +  LDF  + F ++Q++
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 280 EQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQAT 456
              V TVN+ L++  G   I+   +   P   ++ +V  WI  A+ RG  E+D+   Q  
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNLTQGR 130

Query: 457 EKYTLVEFGEYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCLSQVS 630
            +     F   + E++L   LF    SL  L      L N+P    G + L +L L+ V 
Sbjct: 131 VELG-AAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSLTHVD 189

Query: 631 ITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI-VTDAYEVDIFAPNL 807
           ITDD +   V+ C LL  L LR C+ L  +++AG N  L+ L V+   D  ++ + AP L
Sbjct: 190 ITDDAVRDTVACCRLLEFLSLRNCHLLKFVRIAGEN--LRGLEVVGCLDVRQLQVAAPAL 247

Query: 808 KSVHFHGDILYGYDFRNVSALE------------------------DVFISADGY-EHTE 912
           +S  FHGDILY + +R   +LE                        D ++S  G+  + +
Sbjct: 248 ESFAFHGDILY-FKYREDESLEFEPVEFIGKGNNTQTPSEATPLLRDAYLSHIGFGVYDD 306

Query: 913 PEHDFI--QIFSGVSHIKILTMCIAPPMHI 996
           P H+F    +   V+H KILT+C    +HI
Sbjct: 307 PLHEFAFSNLMEKVAHAKILTICSVGLLHI 336


>ref|XP_003565610.1| PREDICTED: putative F-box/LRR-repeat protein At5g54820-like
            [Brachypodium distachyon]
          Length = 522

 Score =  141 bits (355), Expect = 5e-31
 Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 35/333 (10%)
 Frame = +1

Query: 103  DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 279
            DR+S LPD +L SIL+ LP K A+R+S LS+RW  LW +    +  LDF   +F +  ++
Sbjct: 11   DRLSGLPDDVLHSILARLPFKHAVRTSALSRRWPRLWLHALAASPVLDFTDPDFVRGHSR 70

Query: 280  EQFVNTVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDL-IFCQAT 456
             QFV TVN+ L       +    + F P   ++ +V  WI  A+  G  E+D+ +  Q  
Sbjct: 71   AQFVATVNRCLSARGAAPLRALRVAFSPFGAFERDVVGWISAALGSGATEVDVDLRAQGR 130

Query: 457  EKYTLVEF-------GEY-KVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQ 606
             +   +E        G + + E++L   LF    SL  L  S   L ++P    G + L 
Sbjct: 131  RRSGGIEADAEDDGGGTFRRTEVELRGDLFCSPSSLSRLSLSRFSLRHVPPGAAGLAGLT 190

Query: 607  TLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVIVTDAYEV 786
            +L LS V +TDD L   VS CP+L  L LR C+ L ++++AG   +L+ L V+     ++
Sbjct: 191  SLSLSHVDVTDDALRDAVSGCPVLEFLSLRSCDLLSNVRIAGG--RLRGLEVVRCQVRQL 248

Query: 787  DIFAPNLKSVHFHGDILY------------GYDFRNVS--------ALEDVFISADGYEH 906
             + AP L+S  FHGD++Y            G    NV+         L D ++S   +  
Sbjct: 249  QVAAPALESFAFHGDLMYLREDDSKPLEFIGSKGNNVTPPPSEATPELRDAYLSHVDFSG 308

Query: 907  TEPEHD---FIQIFSGVSHIKILTMCIAPPMHI 996
             +   D   + +  + V+H KILT+C    +HI
Sbjct: 309  EDEVFDGFAYTEFLNKVAHAKILTICSVALLHI 341


>ref|XP_003565629.1| PREDICTED: F-box protein At4g09920-like [Brachypodium distachyon]
          Length = 496

 Score =  139 bits (351), Expect = 1e-30
 Identities = 105/326 (32%), Positives = 164/326 (50%), Gaps = 28/326 (8%)
 Frame = +1

Query: 103 DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDF-GKEFAKAQTQ 279
           DR+S LPD +L SI+  +P K A+R++ LS+RW  LW +    +  LDF  + F ++Q++
Sbjct: 11  DRLSGLPDDVLHSIIGRVPFKQAVRTNALSRRWPRLWLHALAASGVLDFTDRGFVRSQSR 70

Query: 280 EQFVNTVNQYLQLHSGN-KIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQAT 456
              V TVN+ L++  G   I+   +   P   ++ +V  WI  A+ RG  E+D+   Q  
Sbjct: 71  AHIVATVNRCLRVRGGGAPIDVLRVSLCPFGAFERDVVGWIAAALRRGAREVDVNLTQGR 130

Query: 457 EKYTLVEFGEYKVEIDLLAILF-GYDSLVHLRTSHIEL-NLPIDFTGFSSLQTLCLSQVS 630
            +     F   + E++L   LF    SL  L      L N+P    G + L +L L+ V 
Sbjct: 131 VELG-AAFVNCRTELELPGDLFCAESSLARLSLGRCSLSNVPPGAPGLAGLTSLSLTHVD 189

Query: 631 ITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI-VTDAYEVDIFAPNL 807
           ITDD +   V+ C LL  L LR C+ L  +++AG   +L+ L V+   D  ++ + AP L
Sbjct: 190 ITDDAVRDTVACCRLLEFLSLRNCHVLKFVRIAGE--KLRGLEVVGCLDVRQLQVAAPAL 247

Query: 808 KSVHFHGDILY-----GYDFRNVS---------------ALEDVFISADGY-EHTEPEHD 924
           +S  FHGDIL      G++F  V                 L D ++S  G+  + +P H+
Sbjct: 248 ESFAFHGDILCFGEDDGFEFEPVEFIGKGNTRTPSEATPELRDAYLSHIGFGVYDDPLHE 307

Query: 925 FI--QIFSGVSHIKILTMCIAPPMHI 996
           F    +   V+H KILT+C    +HI
Sbjct: 308 FAFSNLMEKVAHAKILTICSVGLLHI 333


>ref|XP_002316659.1| predicted protein [Populus trichocarpa] gi|222859724|gb|EEE97271.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  125 bits (315), Expect = 2e-26
 Identities = 87/262 (33%), Positives = 140/262 (53%), Gaps = 4/262 (1%)
 Frame = +1

Query: 115 ELPDGILESILSSLPMKVALRSSVLSKRWRNLWKYLWIHATTLDFGKEFAKAQTQEQFVN 294
           +LPD +L+ I S LP+K A++  +LS R++N W +       LDF  +FA+ ++ E F +
Sbjct: 46  DLPDDVLDMIFSFLPIKKAMQIGILSTRFKNSWNF----NRRLDFDNDFARGRSPEDFKS 101

Query: 295 TVNQYLQLHSGNKIEKFLLHFYPGEHYKANVEKWIEFAILRGVEELDLIFCQATEKYTLV 474
            VN+    H+G++I  F L F P    +  VEKWI  +I +GVEELDL F Q+   +   
Sbjct: 102 IVNKVFDRHAGSRILSFRLCFDPNRE-ELLVEKWIRKSIEKGVEELDLEFYQSGNVF--- 157

Query: 475 EFGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPIDFTGFSSLQTLCLSQVSITDDTLES 654
              E +    L + ++  +SL  L+ +  +L+LP    G   L TL L ++ IT   +++
Sbjct: 158 ---EGRWPFKLNSDVYEAESLKILKLTLCQLDLPPKLKGLHVLNTLVLRKIIITPTLIDT 214

Query: 655 IVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLSVI-VTDAYE---VDIFAPNLKSVHF 822
           +   C  L  L L +C+ +  +K+       KT  V+ V D  E   + I APNL+S H+
Sbjct: 215 LFQNCFFLETLDLAHCHRIFHLKI----FAQKTFKVLKVGDCQEILRIYIDAPNLRSFHY 270

Query: 823 HGDILYGYDFRNVSALEDVFIS 888
            G + +   F +V  L+DV +S
Sbjct: 271 CGHVCF-IKFNSVPQLKDVMLS 291


>emb|CBI26021.3| unnamed protein product [Vitis vinifera]
          Length = 487

 Score =  125 bits (314), Expect = 3e-26
 Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 22/278 (7%)
 Frame = +1

Query: 103 DRISELPDGILESILSSLPMKVALRSSVLSKRWRNLW---KYLWIHA----------TTL 243
           D + ELPD IL +I+S LP+K A+R+ +LSKRWR++W     LW  A          T++
Sbjct: 16  DWLVELPDDILSTIISLLPLKEAVRTGILSKRWRSIWTCHSELWFDAASVLGIGDCSTSM 75

Query: 244 DFGKEFAKAQTQ-EQFVNTVNQYLQLHS-GNKIEKFLLHFYPGEHYKANVEKWIEFAILR 417
              +    +Q Q  +FV  V+Q++   S G KI  F +HF  G+ + +++++WI  A+++
Sbjct: 76  SGNQPELNSQMQSSKFVERVDQFMYYRSQGRKINSFSIHFPLGKEFMSHIDQWITCAVMK 135

Query: 418 GVEELDL------IFCQATEKYTLVEFGEYKVEIDLLAILFGYDSLVHLRTSHIELNLPI 579
           GVE +DL       F    +  +   F  Y+    L ++  G  +L HLR +   L+   
Sbjct: 136 GVENIDLDLSEYFSFNLKRDDTSSTAFQIYEFPCRLFSVPGGRCTLKHLRLASCHLSALP 195

Query: 580 DFTGFSSLQTLCLSQVSITDDTLESIVSKCPLLTNLYLRYCNNLGSIKVAGPNLQLKTLS 759
                +SL T+ L +V+I+D  L+ ++S C  L  L L  CN L ++  +  NLQLK LS
Sbjct: 196 SSNTLTSLITVDLQRVNISDQQLQDLLSTCSHLEWLSLCVCNGLVNLSFSALNLQLKFLS 255

Query: 760 VIVTDAYE-VDIFAPNLKSVHFHGDILYGYDFRNVSAL 870
           +      E ++I A +L +  + G  L  + F+NV  L
Sbjct: 256 IKNCFRLETIEIHAADLVTFKYGGH-LPSFSFKNVPKL 292