BLASTX nr result
ID: Coptis23_contig00008013
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008013 (232 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote... 100 1e-19 emb|CAB10541.1| TRP-185 like protein [Arabidopsis thaliana] gi|7... 100 1e-19 ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [... 98 6e-19 ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855... 97 1e-18 >ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis thaliana] Length = 1850 Score = 100 bits (249), Expect = 1e-19 Identities = 51/76 (67%), Positives = 59/76 (77%) Frame = +3 Query: 3 GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182 GLWLMYPRTI+YY+KEL+LL+L+GSV ++DARTEVSLLAK D ELTE Sbjct: 1233 GLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPDPELTEL 1292 Query: 183 FMNTELYARVSVAVLF 230 F+NTELYARVSVA LF Sbjct: 1293 FINTELYARVSVAGLF 1308 >emb|CAB10541.1| TRP-185 like protein [Arabidopsis thaliana] gi|7268513|emb|CAB78764.1| TRP-185 like protein [Arabidopsis thaliana] Length = 1493 Score = 100 bits (249), Expect = 1e-19 Identities = 51/76 (67%), Positives = 59/76 (77%) Frame = +3 Query: 3 GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182 GLWLMYPRTI+YY+KEL+LL+L+GSV ++DARTEVSLLAK D ELTE Sbjct: 785 GLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPDPELTEL 844 Query: 183 FMNTELYARVSVAVLF 230 F+NTELYARVSVA LF Sbjct: 845 FINTELYARVSVAGLF 860 >ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1| predicted protein [Populus trichocarpa] Length = 1224 Score = 98.6 bits (244), Expect = 5e-19 Identities = 51/76 (67%), Positives = 58/76 (76%) Frame = +3 Query: 3 GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182 GLWL +P+TI+YY+KELKLLSL+GSV + DA TEVSLLAK D ELTEA Sbjct: 620 GLWLSHPKTIKYYMKELKLLSLYGSVAFDEDFEAELCDNQDASTEVSLLAKSPDPELTEA 679 Query: 183 FMNTELYARVSVAVLF 230 F+NTELYARVSVAVLF Sbjct: 680 FINTELYARVSVAVLF 695 >ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Length = 1852 Score = 98.2 bits (243), Expect = 6e-19 Identities = 50/76 (65%), Positives = 58/76 (76%) Frame = +3 Query: 3 GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182 GLWLMYPRTI+YY++EL+LL+L+GSV + DARTEVSLLAK D ELTE Sbjct: 1241 GLWLMYPRTIKYYIRELRLLTLYGSVAFDEDFEAELSDNTDARTEVSLLAKSPDPELTEL 1300 Query: 183 FMNTELYARVSVAVLF 230 F+NTELYARVSVA LF Sbjct: 1301 FINTELYARVSVAGLF 1316 >ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera] Length = 920 Score = 97.1 bits (240), Expect = 1e-18 Identities = 50/76 (65%), Positives = 57/76 (75%) Frame = +3 Query: 3 GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182 GLWL P+TI+YY+KELKLL+L+GSV +HDAR EVSLLAK D ELTE Sbjct: 462 GLWLSNPQTIKYYMKELKLLTLYGSVAFDEDFEAELAENHDARNEVSLLAKSPDPELTEI 521 Query: 183 FMNTELYARVSVAVLF 230 F+NTELYARVSVAVLF Sbjct: 522 FINTELYARVSVAVLF 537