BLASTX nr result

ID: Coptis23_contig00008013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008013
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...   100   1e-19
emb|CAB10541.1| TRP-185 like protein [Arabidopsis thaliana] gi|7...   100   1e-19
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [...    98   6e-19
ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855...    97   1e-18

>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
            thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
            methyltransferase (SpoU) family protein [Arabidopsis
            thaliana]
          Length = 1850

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = +3

Query: 3    GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182
            GLWLMYPRTI+YY+KEL+LL+L+GSV            ++DARTEVSLLAK  D ELTE 
Sbjct: 1233 GLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPDPELTEL 1292

Query: 183  FMNTELYARVSVAVLF 230
            F+NTELYARVSVA LF
Sbjct: 1293 FINTELYARVSVAGLF 1308


>emb|CAB10541.1| TRP-185 like protein [Arabidopsis thaliana]
            gi|7268513|emb|CAB78764.1| TRP-185 like protein
            [Arabidopsis thaliana]
          Length = 1493

 Score =  100 bits (249), Expect = 1e-19
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = +3

Query: 3    GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182
            GLWLMYPRTI+YY+KEL+LL+L+GSV            ++DARTEVSLLAK  D ELTE 
Sbjct: 785  GLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLAKSPDPELTEL 844

Query: 183  FMNTELYARVSVAVLF 230
            F+NTELYARVSVA LF
Sbjct: 845  FINTELYARVSVAGLF 860


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/76 (67%), Positives = 58/76 (76%)
 Frame = +3

Query: 3   GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182
           GLWL +P+TI+YY+KELKLLSL+GSV            + DA TEVSLLAK  D ELTEA
Sbjct: 620 GLWLSHPKTIKYYMKELKLLSLYGSVAFDEDFEAELCDNQDASTEVSLLAKSPDPELTEA 679

Query: 183 FMNTELYARVSVAVLF 230
           F+NTELYARVSVAVLF
Sbjct: 680 FINTELYARVSVAVLF 695


>ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA
            methyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1852

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/76 (65%), Positives = 58/76 (76%)
 Frame = +3

Query: 3    GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182
            GLWLMYPRTI+YY++EL+LL+L+GSV            + DARTEVSLLAK  D ELTE 
Sbjct: 1241 GLWLMYPRTIKYYIRELRLLTLYGSVAFDEDFEAELSDNTDARTEVSLLAKSPDPELTEL 1300

Query: 183  FMNTELYARVSVAVLF 230
            F+NTELYARVSVA LF
Sbjct: 1301 FINTELYARVSVAGLF 1316


>ref|XP_003635077.1| PREDICTED: uncharacterized protein LOC100855390 [Vitis vinifera]
          Length = 920

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/76 (65%), Positives = 57/76 (75%)
 Frame = +3

Query: 3   GLWLMYPRTIRYYVKELKLLSLHGSVXXXXXXXXXXXXSHDARTEVSLLAKGSDVELTEA 182
           GLWL  P+TI+YY+KELKLL+L+GSV            +HDAR EVSLLAK  D ELTE 
Sbjct: 462 GLWLSNPQTIKYYMKELKLLTLYGSVAFDEDFEAELAENHDARNEVSLLAKSPDPELTEI 521

Query: 183 FMNTELYARVSVAVLF 230
           F+NTELYARVSVAVLF
Sbjct: 522 FINTELYARVSVAVLF 537


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