BLASTX nr result

ID: Coptis23_contig00008012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008012
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD,...   145   4e-33
emb|CBI17197.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplas...   145   4e-33
ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD,...   144   6e-33
ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33

>ref|XP_002274874.2| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic [Vitis
           vinifera]
          Length = 720

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = -3

Query: 233 MKTTIVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 54
           +KT IVRSPFVQIPLGVTEDRL+GSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL
Sbjct: 132 IKTQIVRSPFVQIPLGVTEDRLVGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 191

Query: 53  DEGISNLLLNVLSEGVN 3
           DEGISNLLLNVL+EGVN
Sbjct: 192 DEGISNLLLNVLAEGVN 208


>emb|CBI17197.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = -3

Query: 233 MKTTIVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 54
           +KT IVRSPFVQIPLGVTEDRL+GSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL
Sbjct: 17  IKTQIVRSPFVQIPLGVTEDRLVGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 76

Query: 53  DEGISNLLLNVLSEGVN 3
           DEGISNLLLNVL+EGVN
Sbjct: 77  DEGISNLLLNVLAEGVN 93


>ref|XP_002513534.1| Magnesium-chelatase subunit chlD, chloroplast precursor, putative
           [Ricinus communis] gi|223547442|gb|EEF48937.1|
           Magnesium-chelatase subunit chlD, chloroplast precursor,
           putative [Ricinus communis]
          Length = 760

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = -3

Query: 233 MKTTIVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 54
           +KT +VRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL
Sbjct: 175 IKTEVVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 234

Query: 53  DEGISNLLLNVLSEGVN 3
           DEGISNLLLNVL+EGVN
Sbjct: 235 DEGISNLLLNVLTEGVN 251


>ref|XP_003517516.1| PREDICTED: magnesium-chelatase subunit chlD, chloroplastic-like
           [Glycine max]
          Length = 750

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = -3

Query: 233 MKTTIVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 54
           +KT I++SPFVQIPLG+TEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL
Sbjct: 162 IKTRIIKSPFVQIPLGITEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 221

Query: 53  DEGISNLLLNVLSEGVN 3
           DEGISNLLLNVLSEGVN
Sbjct: 222 DEGISNLLLNVLSEGVN 238


>ref|XP_002314091.1| predicted protein [Populus trichocarpa] gi|222850499|gb|EEE88046.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = -3

Query: 233 MKTTIVRSPFVQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 54
           +KT +VRSPF+QIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL
Sbjct: 177 IKTQVVRSPFIQIPLGVTEDRLIGSVDVEESVKTGTTVFQPGLLAEAHRGVLYVDEINLL 236

Query: 53  DEGISNLLLNVLSEGVN 3
           DEGISNLLLNVL+EGVN
Sbjct: 237 DEGISNLLLNVLTEGVN 253


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