BLASTX nr result

ID: Coptis23_contig00008009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008009
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   149   8e-49
emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]   149   8e-49
ref|XP_002298993.1| 2-oxoglutarate-dependent dioxygenase [Populu...   147   1e-45
ref|XP_002317640.1| 2-oxoglutarate-dependent dioxygenase [Populu...   144   4e-43
ref|XP_003612446.1| 1-aminocyclopropane-1-carboxylate oxidase [M...   139   8e-43

>ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 298

 Score =  149 bits (377), Expect(2) = 8e-49
 Identities = 67/105 (63%), Positives = 86/105 (81%)
 Frame = +3

Query: 3   DFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKSVVKSLFDVPVEIKKRNTDVIAGSG 182
           DFP Q  +L  AC+EWG FR++NH +P +L+S+MKSVV SL D+P+E+K+RNTDVIAGSG
Sbjct: 13  DFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNTDVIAGSG 72

Query: 183 YVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVY 317
           Y+AP+K NPLYEALGLYD+ S QAV  FC+QL+ S  QR+TI +Y
Sbjct: 73  YMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIY 117



 Score = 69.3 bits (168), Expect(2) = 8e-49
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = +2

Query: 371 RDTIMVYASALHNLTTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHE 520
           R+TI +YA A+  L  ++ +KLAE+MG+G D  KEW CQFRINKYNFT E
Sbjct: 111 RETIKIYAKAVQELAMDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPE 160


>emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]
          Length = 296

 Score =  149 bits (377), Expect(2) = 8e-49
 Identities = 67/105 (63%), Positives = 86/105 (81%)
 Frame = +3

Query: 3   DFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKSVVKSLFDVPVEIKKRNTDVIAGSG 182
           DFP Q  +L  AC+EWG FR++NH +P +L+S+MKSVV SL D+P+E+K+RNTDVIAGSG
Sbjct: 13  DFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNTDVIAGSG 72

Query: 183 YVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVY 317
           Y+AP+K NPLYEALGLYD+ S QAV  FC+QL+ S  QR+TI +Y
Sbjct: 73  YMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIY 117



 Score = 69.3 bits (168), Expect(2) = 8e-49
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = +2

Query: 371 RDTIMVYASALHNLTTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHE 520
           R+TI +YA A+  L  ++ +KLAE+MG+G D  KEW CQFRINKYNFT E
Sbjct: 111 RETIKIYAKAVQELAMDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPE 160


>ref|XP_002298993.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222846251|gb|EEE83798.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 297

 Score =  147 bits (370), Expect(2) = 1e-45
 Identities = 66/105 (62%), Positives = 87/105 (82%)
 Frame = +3

Query: 3   DFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKSVVKSLFDVPVEIKKRNTDVIAGSG 182
           +FP Q EKL  AC+EWG FR++NH + L LM+DMK VV+SL D+P ++KKRN DVI+GSG
Sbjct: 13  EFPGQYEKLRRACEEWGCFRLVNHNISLALMADMKRVVRSLLDLPFDVKKRNLDVISGSG 72

Query: 183 YVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVY 317
           Y+AP++ NPLYEALGLYD+GSSQAV+ FC+QL+ S+ QR+ I +Y
Sbjct: 73  YMAPSQVNPLYEALGLYDMGSSQAVETFCSQLDASSYQREVIEMY 117



 Score = 61.6 bits (148), Expect(2) = 1e-45
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = +2

Query: 371 RDTIMVYASALHNLTTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHE 520
           R+ I +YA A+H +  +V  KLAES+G+  D  + W CQFRINKYNFT E
Sbjct: 111 REVIEMYAKAIHGVAKDVARKLAESLGLSGDFFESWVCQFRINKYNFTPE 160


>ref|XP_002317640.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222860705|gb|EEE98252.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 297

 Score =  144 bits (364), Expect(2) = 4e-43
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = +3

Query: 3   DFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKSVVKSLFDVPVEIKKRNTDVIAGSG 182
           +FP Q EKL  AC EWG FRI+NH + L LM+DMK VV+SL D+P ++KKRN DVIAGSG
Sbjct: 13  EFPGQYEKLRRACVEWGCFRIVNHNISLALMADMKRVVRSLLDLPFDVKKRNIDVIAGSG 72

Query: 183 YVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVY 317
           Y+AP+K NPLYEALGLYD+ SSQAV+ FC+Q++ S  QR+ I +Y
Sbjct: 73  YMAPSKVNPLYEALGLYDMRSSQAVETFCSQMDASPYQREVIEMY 117



 Score = 55.5 bits (132), Expect(2) = 4e-43
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = +2

Query: 371 RDTIMVYASALHNLTTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHE 520
           R+ I +YA A+H    ++  KLAESMG+  D  + W  QFRINKY+FT E
Sbjct: 111 REVIEMYAKAIHGAAMDIARKLAESMGLNGDLFESWISQFRINKYSFTPE 160


>ref|XP_003612446.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula]
           gi|355513781|gb|AES95404.1|
           1-aminocyclopropane-1-carboxylate oxidase [Medicago
           truncatula]
          Length = 298

 Score =  139 bits (351), Expect(2) = 8e-43
 Identities = 65/102 (63%), Positives = 81/102 (79%)
 Frame = +3

Query: 12  NQAEKLVSACKEWGSFRIINHKVPLTLMSDMKSVVKSLFDVPVEIKKRNTDVIAGSGYVA 191
           ++ +KL  AC+ WG FRIINH +P TLMSDMK VV++L D+P++IKK N DVIAGSGY+A
Sbjct: 17  SECQKLREACERWGCFRIINHSIPSTLMSDMKIVVQALLDLPMDIKKNNKDVIAGSGYMA 76

Query: 192 PNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVY 317
           P+  NPLYEALGLYDLGSSQAV EFC+QL  +  QR+ +  Y
Sbjct: 77  PSAVNPLYEALGLYDLGSSQAVHEFCSQLNATPHQREIMEAY 118



 Score = 59.3 bits (142), Expect(2) = 8e-43
 Identities = 23/50 (46%), Positives = 35/50 (70%)
 Frame = +2

Query: 371 RDTIMVYASALHNLTTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHE 520
           R+ +  Y  A+H+L  ++   +AES+G+GS   ++W CQFRINKY+FT E
Sbjct: 112 REIMEAYGKAIHDLAVKIGQTMAESLGIGSADFEDWPCQFRINKYSFTQE 161


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