BLASTX nr result

ID: Coptis23_contig00007996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007996
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285706.1| PREDICTED: uncharacterized protein LOC100264...   133   2e-29
ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|2...   133   3e-29
ref|XP_002514011.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
ref|XP_003544821.1| PREDICTED: uncharacterized protein LOC100802...   120   2e-25
ref|NP_001235862.1| uncharacterized protein LOC100305727 [Glycin...   113   2e-23

>ref|XP_002285706.1| PREDICTED: uncharacterized protein LOC100264219 [Vitis vinifera]
          Length = 176

 Score =  133 bits (335), Expect = 2e-29
 Identities = 72/149 (48%), Positives = 96/149 (64%), Gaps = 3/149 (2%)
 Frame = -2

Query: 475 SAPTLECCMCGDYGLSQELFRCRICLSRSQHRYCSNLYPKAETYEVCNWCLNQDGSKLER 296
           S P+ ECCMCGDYG S ELF+C++C  RSQHRYCSNLYPKA++Y VCNWCLNQ     E+
Sbjct: 14  SQPSPECCMCGDYGFSYELFQCKVCQFRSQHRYCSNLYPKADSYRVCNWCLNQKDDTPEK 73

Query: 295 TQSSLSFTYRRNNSEGEEENKMRIKRNNGNNSSHVTSMKVQKRVTNTPLHVNSPIKKQRV 116
           TQ+S + +   ++++  EEN  RIK+    + SH    K Q+     P  V+ PIKKQ+ 
Sbjct: 74  TQNSSNSS---SSNKNNEENDGRIKKKKIGSGSHA---KAQRGSLQLP--VSGPIKKQK- 124

Query: 115 HSDQSIEGKKRVYHA---EESLRRTKSEG 38
             ++S   +KR+  +   EE L RT SEG
Sbjct: 125 SPERSPTTRKRIIASGCMEERLTRTNSEG 153


>ref|XP_002306550.1| predicted protein [Populus trichocarpa] gi|222855999|gb|EEE93546.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  133 bits (334), Expect = 3e-29
 Identities = 77/167 (46%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
 Frame = -2

Query: 502 SKEAHDHDVSAPTLECCMCGDYGLSQELFRCRICLSRSQHRYCSNLYPKAETYEVCNWCL 323
           SK       S+P  ECCMCGD GL  ELF+C++C  RSQHRYCSNLYPKAE+Y+VCNWCL
Sbjct: 4   SKGGTSSSQSSP--ECCMCGDCGLPHELFQCKVCQFRSQHRYCSNLYPKAESYQVCNWCL 61

Query: 322 NQDGSKLERTQSSLSFTYRRNNSEGEEENKMRIKRNNGNNSSHVTSMKVQKRVTNTPLHV 143
           + D +K +   SS S +  +NNSE +  N    K+ NG+N +  +    +       L +
Sbjct: 62  SHD-TKEKSQNSSNSSSSNKNNSEDDSRNN---KKKNGDNQAGPS----KNHRGTLRLQI 113

Query: 142 NSPIKKQRVHSDQSIEGKKRVY---HAEESLRRTKSEGMIKAGMLKQ 11
           NSPIKKQR   ++S   ++R+      EE LRRT+SE M   G  KQ
Sbjct: 114 NSPIKKQR-SPERSPSTRRRLITNGKLEEKLRRTRSEEMSNNGFTKQ 159


>ref|XP_002514011.1| conserved hypothetical protein [Ricinus communis]
           gi|223547097|gb|EEF48594.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score =  129 bits (325), Expect = 3e-28
 Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 6/162 (3%)
 Frame = -2

Query: 469 PTLECCMCGDYGLSQELFRCRICLSRSQHRYCSNLYPKAETYEVCNWCLNQDGSKLERTQ 290
           P+ ECCMCGD GLS ELF+C+IC  RSQHRYCSNLYPKAE+Y+VCNWCL+ D    ER+Q
Sbjct: 15  PSPECCMCGDCGLSHELFQCKICQFRSQHRYCSNLYPKAESYQVCNWCLSHDIK--ERSQ 72

Query: 289 -SSLSFTYRRNNSEGEEENKMRIKRNNGNNSSHVTSMKVQKRVTNTPLHVNSPIKKQRVH 113
            SS S +  +N+SE + +N+   K+ +GN+      +K  +R       +NSPIKKQR  
Sbjct: 73  NSSNSSSSNKNSSEDDSKNRQN-KKKSGNSEGSGGGLKTHQRGNLQLQVINSPIKKQRSP 131

Query: 112 SDQSIEGKKRVY---HAEE--SLRRTKSEGMIKAGMLKQQVF 2
                  ++R+      EE   +RRTKSE +     + + VF
Sbjct: 132 ERSPQTTRRRLISNGRLEEIKLIRRTKSEDISNNNGITKHVF 173


>ref|XP_003544821.1| PREDICTED: uncharacterized protein LOC100802817 [Glycine max]
          Length = 198

 Score =  120 bits (300), Expect = 2e-25
 Identities = 71/171 (41%), Positives = 97/171 (56%), Gaps = 21/171 (12%)
 Frame = -2

Query: 460 ECCMCGDYGLSQELFRCRICLSRSQHRYCSNLYPKAETYEVCNWCLNQ-DGSKLERTQSS 284
           ECCMCGD G S +LF+C++C  RSQHRYCSNLYPK E+   CNWCL+Q + +K + T SS
Sbjct: 15  ECCMCGDLGFSDQLFQCKVCQFRSQHRYCSNLYPKPESLGTCNWCLSQREDTKEKSTNSS 74

Query: 283 LSFTYRRNNSEGEEENKMRIKRNNGNNSSHVTSMKVQKRVTNTPLH--VNSPIKKQR-VH 113
            S +  RNN +     ++R    NGNN+S      V+K V  + LH  +  PIKK +   
Sbjct: 75  NSSSSIRNNDDERRYKRIR----NGNNNSAQNIGPVKKEVKGSVLHLQIQKPIKKPKSPE 130

Query: 112 SDQS--------------IEGKKRVY---HAEESLRRTKSEGMIKAGMLKQ 11
           S +S              +  +KR+      EE LRRT+SE + ++G  KQ
Sbjct: 131 SSRSPSASNSPPKSSLVLVSTRKRIVTNGALEERLRRTRSENITRSGTTKQ 181


>ref|NP_001235862.1| uncharacterized protein LOC100305727 [Glycine max]
           gi|255626439|gb|ACU13564.1| unknown [Glycine max]
          Length = 199

 Score =  113 bits (283), Expect = 2e-23
 Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 21/171 (12%)
 Frame = -2

Query: 460 ECCMCGDYGLSQELFRCRICLSRSQHRYCSNLYPKAETYEVCNWCLNQ-DGSKLERTQSS 284
           ECCMCGD G S +LF+C+ C  RSQHRYCSNLYPK E+   CNWCL+Q + +K   T SS
Sbjct: 15  ECCMCGDLGFSDQLFQCKACQFRSQHRYCSNLYPKPESLGTCNWCLSQREDTKERSTNSS 74

Query: 283 LSFTYRRNNSEGEEENKMRIKRNNGNNSSHVTSMKVQKRVTNTPLH--VNSPIKKQR--- 119
            S +  RNN   ++E++++  RN  + +S      V+K V  + LH  ++ PIKK +   
Sbjct: 75  NSSSSIRNN---DDESRIKRIRNGNSYNSAQNIGPVKKGVKGSVLHLQIHKPIKKPKSPE 131

Query: 118 ------------VHSDQSIEGKKRVY---HAEESLRRTKSEGMIKAGMLKQ 11
                         S   +  +KR+      EE LRRT+SE + ++G  KQ
Sbjct: 132 SSRSPSASNSPPKSSPVLVSTRKRIVTNGTLEERLRRTRSEDITRSGATKQ 182


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