BLASTX nr result

ID: Coptis23_contig00007983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007983
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38595.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog...   166   1e-38
emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]   165   2e-38
emb|CBI23882.3| unnamed protein product [Vitis vinifera]              164   5e-38
ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog...   164   5e-38

>emb|CBI38595.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  166 bits (419), Expect = 1e-38
 Identities = 89/181 (49%), Positives = 120/181 (66%)
 Frame = +2

Query: 524  NCEGSKPADILGIDYKSTLKSTLIAFADELKKSLMAKLEEFIXXXXXXXXXXXXXXEKRS 703
            N +GS PA++LGIDYKSTLK  L +FAD++ KS M+KLEE I               KR+
Sbjct: 524  NAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRN 583

Query: 704  HLTKILSRIDAVESQLSVVEKEIQEYASMCSTVAKRITEDFEQEIHKLDKRE*EADEFLK 883
             L  + S  D VE+QL  ++KE Q Y S C+T AK++ ED E E H +D  E E  + L+
Sbjct: 584  RLAALQSSSDEVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVLE 643

Query: 884  TSSMKLQDLIKKNDEEIKKCARELLMLVDSVSKYKESMESTLSNIRRDVSETAEAITNVY 1063
            TS +KLQ+ IK+N+EEI+ CA EL  LVDSVSKYKE M S +S ++ ++SETA A+++ Y
Sbjct: 644  TSKLKLQEAIKQNEEEIQMCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSY 703

Query: 1064 K 1066
            K
Sbjct: 704  K 704


>ref|XP_002279662.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  166 bits (419), Expect = 1e-38
 Identities = 89/181 (49%), Positives = 120/181 (66%)
 Frame = +2

Query: 524  NCEGSKPADILGIDYKSTLKSTLIAFADELKKSLMAKLEEFIXXXXXXXXXXXXXXEKRS 703
            N +GS PA++LGIDYKSTLK  L +FAD++ KS M+KLEE I               KR+
Sbjct: 376  NAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRN 435

Query: 704  HLTKILSRIDAVESQLSVVEKEIQEYASMCSTVAKRITEDFEQEIHKLDKRE*EADEFLK 883
             L  + S  D VE+QL  ++KE Q Y S C+T AK++ ED E E H +D  E E  + L+
Sbjct: 436  RLAALQSSSDEVEAQLIFLKKESQNYTSRCATEAKKLVEDVEIETHNVDIVEREVADVLE 495

Query: 884  TSSMKLQDLIKKNDEEIKKCARELLMLVDSVSKYKESMESTLSNIRRDVSETAEAITNVY 1063
            TS +KLQ+ IK+N+EEI+ CA EL  LVDSVSKYKE M S +S ++ ++SETA A+++ Y
Sbjct: 496  TSKLKLQEAIKQNEEEIQMCAWELYALVDSVSKYKEHMASKISEMKCNLSETAGAVSDSY 555

Query: 1064 K 1066
            K
Sbjct: 556  K 556


>emb|CAN64748.1| hypothetical protein VITISV_041326 [Vitis vinifera]
          Length = 1261

 Score =  165 bits (417), Expect = 2e-38
 Identities = 88/181 (48%), Positives = 119/181 (65%)
 Frame = +2

Query: 524  NCEGSKPADILGIDYKSTLKSTLIAFADELKKSLMAKLEEFIXXXXXXXXXXXXXXEKRS 703
            N +GS PA++LGIDYKSTLK  L +FAD++ KS M+KLEE I               KR+
Sbjct: 359  NAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRN 418

Query: 704  HLTKILSRIDAVESQLSVVEKEIQEYASMCSTVAKRITEDFEQEIHKLDKRE*EADEFLK 883
            HL  + S  D VE+QL+ ++KE Q Y S C+  AK++ ED E E H +D  E E  + L+
Sbjct: 419  HLAALQSSSDEVEAQLNFLKKETQNYTSRCAXEAKKLVEDVEIETHNVDIVEREVADVLE 478

Query: 884  TSSMKLQDLIKKNDEEIKKCARELLMLVDSVSKYKESMESTLSNIRRDVSETAEAITNVY 1063
            TS +KLQ+ IK+N+EEI+ CA EL  LVDSV KYKE M S  S ++ ++SETA A+++ Y
Sbjct: 479  TSKLKLQEAIKQNEEEIQICAWELYALVDSVXKYKEHMASKXSEMKSNLSETAGAVSDSY 538

Query: 1064 K 1066
            K
Sbjct: 539  K 539


>emb|CBI23882.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  164 bits (414), Expect = 5e-38
 Identities = 87/181 (48%), Positives = 119/181 (65%)
 Frame = +2

Query: 524  NCEGSKPADILGIDYKSTLKSTLIAFADELKKSLMAKLEEFIXXXXXXXXXXXXXXEKRS 703
            N +GS P ++LGIDYKS LK  L +FAD++ KS M+KLEE I               KR+
Sbjct: 314  NAKGSSPTEVLGIDYKSALKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRN 373

Query: 704  HLTKILSRIDAVESQLSVVEKEIQEYASMCSTVAKRITEDFEQEIHKLDKRE*EADEFLK 883
             L  + SR D VE+QL+ ++KE Q Y S C+  AK++ ED E E H +D  E E  + L+
Sbjct: 374  RLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETHNVDIVEREVADVLE 433

Query: 884  TSSMKLQDLIKKNDEEIKKCARELLMLVDSVSKYKESMESTLSNIRRDVSETAEAITNVY 1063
            TS +KLQ+ IK+N+EEI+ CA EL  LVDSVSKYKE M S +S ++ ++SETA A+++ Y
Sbjct: 434  TSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKEHMASKISEMKSNLSETAGAVSDSY 493

Query: 1064 K 1066
            K
Sbjct: 494  K 494


>ref|XP_002273942.1| PREDICTED: kinetochore protein NDC80 homolog [Vitis vinifera]
          Length = 571

 Score =  164 bits (414), Expect = 5e-38
 Identities = 87/181 (48%), Positives = 119/181 (65%)
 Frame = +2

Query: 524  NCEGSKPADILGIDYKSTLKSTLIAFADELKKSLMAKLEEFIXXXXXXXXXXXXXXEKRS 703
            N +GS P ++LGIDYKS LK  L +FAD++ KS M+KLEE I               KR+
Sbjct: 376  NAKGSSPTEVLGIDYKSALKPALDSFADDINKSSMSKLEELISLQQQSVENAAKIEAKRN 435

Query: 704  HLTKILSRIDAVESQLSVVEKEIQEYASMCSTVAKRITEDFEQEIHKLDKRE*EADEFLK 883
             L  + SR D VE+QL+ ++KE Q Y S C+  AK++ ED E E H +D  E E  + L+
Sbjct: 436  RLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKKLVEDVEIETHNVDIVEREVADVLE 495

Query: 884  TSSMKLQDLIKKNDEEIKKCARELLMLVDSVSKYKESMESTLSNIRRDVSETAEAITNVY 1063
            TS +KLQ+ IK+N+EEI+ CA EL  LVDSVSKYKE M S +S ++ ++SETA A+++ Y
Sbjct: 496  TSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKEHMASKISEMKSNLSETAGAVSDSY 555

Query: 1064 K 1066
            K
Sbjct: 556  K 556


Top