BLASTX nr result
ID: Coptis23_contig00007980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007980
(1136 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 188 2e-45
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm... 171 4e-40
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 160 7e-37
gb|ABK92768.1| unknown [Populus trichocarpa] 160 7e-37
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 156 1e-35
>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
gi|296088512|emb|CBI37503.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 188 bits (477), Expect = 2e-45
Identities = 122/348 (35%), Positives = 187/348 (53%), Gaps = 13/348 (3%)
Frame = +3
Query: 39 SGFFFQDTW-----DVPYPIKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCKSSD 203
+GFFFQ+ + D+ I Y + +Q T+ FLPE V ++ S NGL+CC+S
Sbjct: 50 AGFFFQERYQWCDEDIS-TISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVF 108
Query: 204 DSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCKET 383
S D I+VCNP K+++++ + LAF+PF P+D +NFK+ V +
Sbjct: 109 PSP--DPSIFVCNPSNKQWIRL-LETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQAQ 165
Query: 384 L-----LTILLQVYSSKTKEWSKLELRVCGDSYNCVPDGQVVFASGMLYWMTYGDVILAF 548
++YSS+ W K + +C ++N + + +F G+L+W+T GD +L+F
Sbjct: 166 TDMDDDSYFSFEIYSSQAGAWKKSK-EICQCNHNLFKN-KGIFVGGILHWLTDGDQVLSF 223
Query: 549 DVVSEEFCFVGLPLERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKWVL 722
++ +E + P I+ + + E+CIGES RLH+I+ISE G QVW ++ + W L
Sbjct: 224 NIENELSWLISAPFPTIHLT-AIPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSL 282
Query: 723 KHSISLSEMEEGNPHFLYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCNYSYQN 902
HS +L MEE N LYN R A+ + D + W++PL +KDG LL++
Sbjct: 283 VHSTTLEVMEEENSQLLYNTRDRVAQRISIDSI--PWMDPLAFKDGLLLMR--------- 331
Query: 903 EELEVCTKIYLYNFETRTMLELFSIDKLGSQLGF-LRALPYSMSLAPL 1043
V TKI LY TR M EL ++ KLG F +PYS++LAPL
Sbjct: 332 ----VSTKIILYCIGTRKMEELCNLSKLGRNSIFGPLVIPYSLNLAPL 375
>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
gi|223535221|gb|EEF36899.1| conserved hypothetical
protein [Ricinus communis]
Length = 375
Score = 171 bits (432), Expect = 4e-40
Identities = 120/343 (34%), Positives = 176/343 (51%), Gaps = 8/343 (2%)
Frame = +3
Query: 39 SGFFFQDT-----WDVPYPIKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCKSSD 203
SGFFFQ +D+ I Y VK + L V DFLP+ V L+ + NGL+CC+S
Sbjct: 56 SGFFFQQRFQWSEYDIE-TINYIPVKWEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCF 114
Query: 204 DSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCKET 383
I+VCNP+ KE+V+++W + H ALAFDP +NFKL +
Sbjct: 115 PFEL--PAIFVCNPLNKEWVKLDWTEPDKEH-SIALAFDPLLDISGNSANFKL-----DE 166
Query: 384 LLTILLQVYSSKTKEWSKLELRVCGDSYNCVPDGQVVFASGMLYWMTYGDVILAFDVVSE 563
L +YSS+T W+ L +C + N + + V+ G+L+W+T D IL FDV +E
Sbjct: 167 QLYFSFDIYSSRTGSWN-LSKDICWCNSN-LHKNKGVYIRGVLHWLTDEDQILTFDVDNE 224
Query: 564 EFCFVGLPLERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKWVLKHSIS 737
+ P+ S + CIGE LH+++ISE GF +W ++ E W+LK+S +
Sbjct: 225 LAFLISAPVPAAEFSTA-PKACIGELEGCLHYVMISEEGFHIWSLEDYFELNWLLKYSKT 283
Query: 738 LSEMEEGNPHFLYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCNYSYQNEELEV 917
L+EME+ +P FL N + + DD + W++ L +KDG L+ L V
Sbjct: 284 LAEMEQEHPKFLLNMQELVKLQMTDD--VSPWVDSLAFKDGILV-------------LRV 328
Query: 918 CTKIYLYNFETRTMLELFSIDKLG-SQLGFLRALPYSMSLAPL 1043
T +YLY+ M E+ K G S + LPYSM+L PL
Sbjct: 329 STIVYLYDIIRSKMQEVCDNSKFGTSSMYCPTVLPYSMTLVPL 371
>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 160 bits (404), Expect = 7e-37
Identities = 119/354 (33%), Positives = 180/354 (50%), Gaps = 14/354 (3%)
Frame = +3
Query: 27 KTVTSGFFFQDTW----DVPYPIKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCK 194
K SGFFFQ D I YF V+ ++ LQ V FLP+ V ++A NGL+CC+
Sbjct: 51 KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFAFLPQDVVVLALCNGLVCCR 108
Query: 195 SSDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLA--- 365
S D IYVCNP+ E+ +++W K ALAF+PF L+NFK+
Sbjct: 109 SCYPFE--DPAIYVCNPLNSEWWKLDW-KEPGKESFIALAFNPFQDISVNLTNFKVVRPR 165
Query: 366 -CVCKETLLTILLQVYSSKTKEWSKLELRVCGDSYNCVPDGQVVFASGMLYWMTYGDVIL 542
++ ++Y+S+T+ W KL VC N + + +F+ G+L+W+T GD IL
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKNEGIFSGGILHWLTDGDQIL 223
Query: 543 AFDVVSEEFCFVGLPLERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKW 716
F+V +E + PL CIGES +L++++ISE G VW+++ + W
Sbjct: 224 TFNVENELALLISTPLPA-GEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTW 282
Query: 717 VLKHSISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCN 887
LK+S +L+++E+ + LYN R+ DD W++PL +KDG L+V+
Sbjct: 283 SLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RPWMDPLAFKDGVLVVR---- 333
Query: 888 YSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR-ALPYSMSLAPLG 1046
+ IYLY+ +T M E+ K G+ LPY+MSL PLG
Sbjct: 334 ---------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPLG 378
>gb|ABK92768.1| unknown [Populus trichocarpa]
Length = 384
Score = 160 bits (404), Expect = 7e-37
Identities = 119/354 (33%), Positives = 180/354 (50%), Gaps = 14/354 (3%)
Frame = +3
Query: 27 KTVTSGFFFQDTW----DVPYPIKYFSVKNDQAILQDTVLDFLPEMVELIASSNGLLCCK 194
K SGFFFQ D I YF V+ ++ LQ V FLP+ V ++A NGL+CC+
Sbjct: 51 KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFAFLPQDVVVLALCNGLVCCR 108
Query: 195 SSDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLA--- 365
S D IYVCNP+ E+ +++W K ALAF+PF L+NFK+
Sbjct: 109 SCYPFE--DPAIYVCNPLNSEWWKLDW-KEPGKESFIALAFNPFQDISVNLTNFKVVRPR 165
Query: 366 -CVCKETLLTILLQVYSSKTKEWSKLELRVCGDSYNCVPDGQVVFASGMLYWMTYGDVIL 542
++ ++Y+S+T+ W KL VC N + + +F+ G+L+W+T GD IL
Sbjct: 166 QFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKNEGIFSGGILHWLTDGDQIL 223
Query: 543 AFDVVSEEFCFVGLPLERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--EPKW 716
F+V +E + PL CIGES +L++++ISE G VW+++ + W
Sbjct: 224 TFNVENELALLISTPLPA-GEFNTRPHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTW 282
Query: 717 VLKHSISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPTWIEPLVYKDGTLLVKLRCN 887
LK+S +L+++E+ + LYN R+ DD W++PL +KDG L+V+
Sbjct: 283 SLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RPWMDPLAFKDGVLVVR---- 333
Query: 888 YSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR-ALPYSMSLAPLG 1046
+ IYLY+ +T M E+ K G+ LPY+MSL PLG
Sbjct: 334 ---------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSPIVLPYTMSLVPLG 378
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 156 bits (394), Expect = 1e-35
Identities = 115/354 (32%), Positives = 174/354 (49%), Gaps = 19/354 (5%)
Frame = +3
Query: 39 SGFFFQDTW-DVPYPIKYFSVK--NDQAILQDTVLDFLPEMVELIASSNGLLCCKS---S 200
SGF FQ+ + P I F+ + + +Q V FLPE V ++ S NGL+CC+S +
Sbjct: 52 SGFMFQEKYRKCPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRT 111
Query: 201 DDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFDPFCYPVDELSNFKLACVCK- 377
S IYVCNP+ K++V E + ALAFDP PV+ +NFK+ + +
Sbjct: 112 QHSTTHSTTIYVCNPLFKKWVSFEVAQLDSF-SSIALAFDPILDPVNTATNFKVVRIQQL 170
Query: 378 ---ETLLTILLQVYSSKTKEWSKLELRVCGDSYNCVPDGQVV-----FASGMLYWMTYGD 533
+ + ++YSS+T W + S C DG ++ +A G+L+W+T D
Sbjct: 171 ENEQEEMYYTFEIYSSETGTWKE-------SSEVCYSDGNLLNNNGTYAKGVLHWLTDTD 223
Query: 534 VILAFDVVSEEFCFVGLPLERIYRSQGLCEVCIGESNDRLHFIVISEAGFQVWLMDS--E 707
ILAFD E V P+ + CIGES LHFI+I E G VW +D E
Sbjct: 224 QILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFE 283
Query: 708 PKWVLKHSISLSEMEEGNPHFLYNDAK-RAARLVPDDFVIPTWIEPLVYKDGTLLVKLRC 884
KW LKHS L +E+ NP+ + K R +P + +++P +KD LL++
Sbjct: 284 AKWTLKHSKQLQMIEDENPNMFFKLYKIMQRRRLPG---MEPYMDPWAFKDEVLLMR--- 337
Query: 885 NYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLG-SQLGFLRALPYSMSLAPL 1043
V + +Y Y+ ET ++E+ ++ LG + +PYS+SL PL
Sbjct: 338 ----------VFSTVYFYHIETGKVVEVCNVASLGPNPFVSPPVIPYSLSLIPL 381