BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007979
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arab...   187   4e-45
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi...   186   8e-45
dbj|BAD43393.1| putative protein [Arabidopsis thaliana]               186   1e-44
ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   183   6e-44
gb|ACU23303.1| unknown [Glycine max]                                  183   6e-44

>ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arabidopsis lyrata subsp.
           lyrata] gi|297318197|gb|EFH48619.1| hypothetical protein
           ARALYDRAFT_489706 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  187 bits (475), Expect = 4e-45
 Identities = 99/224 (44%), Positives = 150/224 (66%), Gaps = 8/224 (3%)
 Frame = -3

Query: 664 STTEHTLVENPTTES-----EQEPKTRLIAQNIPWNSTAEDIKNLFQKHGNVTNVELSMY 500
           +TT+  ++E+ ++ +     E+  KTRLIAQN+PW ST EDI++LF+K+GNV ++E+SM+
Sbjct: 67  TTTQDPVLESSSSSATEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVIDIEMSMH 126

Query: 499 NKDRNRGLAFITMASXXXXXXXXXXLGTCEIEGRSVSVAYAKVRKTK---PRVITESTPK 329
            K+RNRGL FI MAS          L +C+ EGR + V YAK +K K   PR      P 
Sbjct: 127 KKERNRGLVFIEMASPDEAATALKSLESCDYEGRRLKVDYAKTKKKKTYAPREKPSPVPT 186

Query: 328 YDLFVANLSWKVKSKDLIEFFKPMNSDVVSAEVTYQMTPTRKPTGYGFVSFRSMEKAEEA 149
           ++LFVANL+++ ++K L EFF     +VVS EV +Q  P R+ +GYGFVSF++ ++AE A
Sbjct: 187 FNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFQENP-RRSSGYGFVSFKTKKQAEAA 245

Query: 148 IRDFQGKELMGKPVRLAFSNRILKGQSKDGISLGEKSADSNSEE 17
           + +FQGK+ MG+P+RLA S + +K Q+K+G+   E+  + +  E
Sbjct: 246 LIEFQGKDFMGRPIRLAKSKQFVKLQAKEGLQPPEEEEEPSPSE 289


>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
           thaliana] gi|51968384|dbj|BAD42884.1| putative protein
           [Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
           putative protein [Arabidopsis thaliana]
           gi|51969588|dbj|BAD43486.1| putative protein
           [Arabidopsis thaliana] gi|51970774|dbj|BAD44079.1|
           putative protein [Arabidopsis thaliana]
           gi|62319325|dbj|BAD94588.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657315|gb|AEE82715.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 304

 Score =  186 bits (473), Expect = 8e-45
 Identities = 101/239 (42%), Positives = 152/239 (63%), Gaps = 9/239 (3%)
 Frame = -3

Query: 706 ITKRKTNLLVFQTPSTTEHTLVENPTTES------EQEPKTRLIAQNIPWNSTAEDIKNL 545
           I  +  NL  + + +T E  L  + ++ S      E+  KTRLIAQN+PW ST EDI++L
Sbjct: 54  IPAKSRNLTSYFSTTTQEPVLESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSL 113

Query: 544 FQKHGNVTNVELSMYNKDRNRGLAFITMASXXXXXXXXXXLGTCEIEGRSVSVAYAKVRK 365
           F+K+G+V ++E+SM+ K+RNRGL FI MAS          L +CE EGR + V YAK +K
Sbjct: 114 FEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKK 173

Query: 364 TK---PRVITESTPKYDLFVANLSWKVKSKDLIEFFKPMNSDVVSAEVTYQMTPTRKPTG 194
            K   PR      P ++LFVANL+++ ++K L EFF     +VVS EV +   P R+ +G
Sbjct: 174 KKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENP-RRSSG 232

Query: 193 YGFVSFRSMEKAEEAIRDFQGKELMGKPVRLAFSNRILKGQSKDGISLGEKSADSNSEE 17
           YGFVSF++ ++AE A+ +FQGK+ +G+P+RLA S + +K Q+K+G+   E+ A+    +
Sbjct: 233 YGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQ 291


>dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
          Length = 304

 Score =  186 bits (472), Expect = 1e-44
 Identities = 101/239 (42%), Positives = 152/239 (63%), Gaps = 9/239 (3%)
 Frame = -3

Query: 706 ITKRKTNLLVFQTPSTTEHTLVENPTTES------EQEPKTRLIAQNIPWNSTAEDIKNL 545
           I  +  NL  + + +T E  L  + ++ S      E+  KTRLIAQN+PW ST EDI++L
Sbjct: 54  IPAKSRNLTSYFSTTTQEPVLDSSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSL 113

Query: 544 FQKHGNVTNVELSMYNKDRNRGLAFITMASXXXXXXXXXXLGTCEIEGRSVSVAYAKVRK 365
           F+K+G+V ++E+SM+ K+RNRGL FI MAS          L +CE EGR + V YAK +K
Sbjct: 114 FEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKK 173

Query: 364 TK---PRVITESTPKYDLFVANLSWKVKSKDLIEFFKPMNSDVVSAEVTYQMTPTRKPTG 194
            K   PR      P ++LFVANL+++ ++K L EFF     +VVS EV +   P R+ +G
Sbjct: 174 KKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENP-RRSSG 232

Query: 193 YGFVSFRSMEKAEEAIRDFQGKELMGKPVRLAFSNRILKGQSKDGISLGEKSADSNSEE 17
           YGFVSF++ ++AE A+ +FQGK+ +G+P+RLA S + +K Q+K+G+   E+ A+    +
Sbjct: 233 YGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQ 291


>ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
           max]
          Length = 315

 Score =  183 bits (465), Expect = 6e-44
 Identities = 108/230 (46%), Positives = 140/230 (60%), Gaps = 2/230 (0%)
 Frame = -3

Query: 703 TKRKTNLLVFQTPSTTEHTLVENPTTESEQEPKTRLIAQNIPWNSTAEDIKNLFQKHGNV 524
           TK+  NL    T ++T     E P    E+  +TRL+AQN+PW ST EDI+ LF+KHG V
Sbjct: 57  TKQTLNLT--PTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKV 114

Query: 523 TNVELSMYNKDRNRGLAFITMASXXXXXXXXXXLGTCEIEGRSVSVAYA--KVRKTKPRV 350
             VELSMY K+RNRGLAF+ M S          L + E EGR + V YA  K  KT P  
Sbjct: 115 LEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPP 174

Query: 349 ITESTPKYDLFVANLSWKVKSKDLIEFFKPMNSDVVSAEVTYQMTPTRKPTGYGFVSFRS 170
           +      ++LFVANLS++  SKDL EFF      VVSAEV Y+  P R+P+GYGFVSF+S
Sbjct: 175 VKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNP-RRPSGYGFVSFKS 233

Query: 169 MEKAEEAIRDFQGKELMGKPVRLAFSNRILKGQSKDGISLGEKSADSNSE 20
            ++AE A+ +FQGK  MG+P+R+    R ++ Q  DG     KS D+ SE
Sbjct: 234 KKEAEAALAEFQGKVFMGRPIRVDRGRRFVQ-QPGDG---SAKSEDTPSE 279


>gb|ACU23303.1| unknown [Glycine max]
          Length = 315

 Score =  183 bits (465), Expect = 6e-44
 Identities = 108/230 (46%), Positives = 140/230 (60%), Gaps = 2/230 (0%)
 Frame = -3

Query: 703 TKRKTNLLVFQTPSTTEHTLVENPTTESEQEPKTRLIAQNIPWNSTAEDIKNLFQKHGNV 524
           TK+  NL    T ++T     E P    E+  +TRL+AQN+PW ST EDI+ LF+KHG V
Sbjct: 57  TKQTLNLT--PTHASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKV 114

Query: 523 TNVELSMYNKDRNRGLAFITMASXXXXXXXXXXLGTCEIEGRSVSVAYA--KVRKTKPRV 350
             VELSMY K+RNRGLAF+ M S          L + E EGR + V YA  K  KT P  
Sbjct: 115 LEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPP 174

Query: 349 ITESTPKYDLFVANLSWKVKSKDLIEFFKPMNSDVVSAEVTYQMTPTRKPTGYGFVSFRS 170
           +      ++LFVANLS++  SKDL EFF      VVSAEV Y+  P R+P+GYGFVSF+S
Sbjct: 175 VKPKVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRDNP-RRPSGYGFVSFKS 233

Query: 169 MEKAEEAIRDFQGKELMGKPVRLAFSNRILKGQSKDGISLGEKSADSNSE 20
            ++AE A+ +FQGK  MG+P+R+    R ++ Q  DG     KS D+ SE
Sbjct: 234 KKEAEAALAEFQGKVFMGRPIRVDRGRRFVQ-QPGDG---SAKSEDTPSE 279