BLASTX nr result

ID: Coptis23_contig00007973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007973
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation...   557   e-156
ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation...   556   e-156
gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1...   556   e-156
ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation...   555   e-156
ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation...   554   e-155

>ref|XP_003517705.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  557 bits (1435), Expect = e-156
 Identities = 264/326 (80%), Positives = 295/326 (90%)
 Frame = -1

Query: 1247 MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 1068
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 1067 SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 888
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELPS 120

Query: 887  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 708
            AIHVKRIA DP+EQ+G+S+L IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPAEQTGESVLLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 707  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 528
            +KESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 527  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALVFNPDG 348
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINAL FNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 347  RSFSSGGEDGYIRLHHFDPDYFNIKI 270
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
 Frame = -1

Query: 1259 ETTSMRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERL---GTYIGHNG 1089
            E T    +L+KG +  +   ++      + S G+D    +W ++ G+ L       GH  
Sbjct: 133  EQTGESVLLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKLLKESDKESGHKK 192

Query: 1088 TVWCCDVSRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDF----------GV 939
            TV     S D    +TGS D++ +LWD +  + + T+    P  +V            G 
Sbjct: 193  TVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVLGGG 252

Query: 938  GDGIAVMTTDMFMDHAPAIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIIS 759
             D  AV TTD       A    +I Q+        I  +K   G IN   F P  K+  S
Sbjct: 253  QDASAVTTTDHRAGKFEAKFYDKILQE-------EIGGVKGHFGPINALAFNPDGKSFSS 305

Query: 758  AGEDAVVRI 732
             GED  VR+
Sbjct: 306  GGEDGYVRL 314


>ref|XP_003534423.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max]
          Length = 326

 Score =  556 bits (1434), Expect = e-156
 Identities = 267/326 (81%), Positives = 294/326 (90%)
 Frame = -1

Query: 1247 MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 1068
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 1067 SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 888
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+ + 
Sbjct: 61   SRDSVRLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDRLAVITTDPFMELSS 120

Query: 887  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 708
            AIHVKRIA DP+EQSG+S+L IK P G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIADDPTEQSGESLLLIKGPLGRINRAIWGPLNSTIISAGEDAVIRIWDSETGKL 180

Query: 707  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 528
            +KESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 527  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALVFNPDG 348
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINAL FNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 347  RSFSSGGEDGYIRLHHFDPDYFNIKI 270
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>gb|AAK49947.1|AF335551_1 TGF-beta receptor-interacting protein 1 [Phaseolus vulgaris]
          Length = 326

 Score =  556 bits (1432), Expect = e-156
 Identities = 264/326 (80%), Positives = 294/326 (90%)
 Frame = -1

Query: 1247 MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 1068
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWCCDV 60

Query: 1067 SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 888
            SRDS RLITGSADQT KLW+V+ G QLFTFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSGRLITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 887  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 708
            AIHVKRIA DP+EQ+G S++ IK P+G+INRA++GPLN+TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPTEQTGDSVVLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKL 180

Query: 707  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 528
            IKESDKE+GH+KT+TSL+KS D SHFLTGS DKSARLWD R+L LIKTYVTE PVNAV +
Sbjct: 181  IKESDKESGHKKTVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAM 240

Query: 527  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALVFNPDG 348
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINAL FNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 347  RSFSSGGEDGYIRLHHFDPDYFNIKI 270
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326



 Score = 60.8 bits (146), Expect = 7e-07
 Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 13/189 (6%)
 Frame = -1

Query: 1259 ETTSMRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERL---GTYIGHNG 1089
            E T    +L+KG +  +   ++      + S G+D    +W ++ G+ +       GH  
Sbjct: 133  EQTGDSVVLIKGPQGRINRAIWGPLNRTIISAGEDAVIRIWDSETGKLIKESDKESGHKK 192

Query: 1088 TVWCCDVSRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDF----------GV 939
            TV     S D    +TGS D++ +LWD +  + + T+    P  +V            G 
Sbjct: 193  TVTSLAKSADGSHFLTGSLDKSARLWDTRTLTLIKTYVTERPVNAVAMSPLLDHVVLGGG 252

Query: 938  GDGIAVMTTDMFMDHAPAIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIIS 759
             D  AV TTD       A    +I Q+        I  +K   G IN   F P  K+  S
Sbjct: 253  QDASAVTTTDHRAGKFEAKFYDKILQE-------EIGGVKGHFGPINALAFNPDGKSFSS 305

Query: 758  AGEDAVVRI 732
             GED  VR+
Sbjct: 306  GGEDGYVRL 314


>ref|XP_003540532.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Glycine max] gi|255646294|gb|ACU23631.1| unknown
            [Glycine max]
          Length = 326

 Score =  555 bits (1430), Expect = e-156
 Identities = 265/326 (81%), Positives = 294/326 (90%)
 Frame = -1

Query: 1247 MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 1068
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VWFADNGERLGTY GHNG VW CDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWFADNGERLGTYRGHNGAVWTCDV 60

Query: 1067 SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 888
            SRDS RLITGSADQT KLWDV++G QL+TFNF +PARSVDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSARLITGSADQTAKLWDVQSGLQLYTFNFDSPARSVDFSVGDKLAVITTDPFMELPS 120

Query: 887  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 708
            AIHVKRIA DPS+Q G+S+L IK P+G+INRA++GPLN TIISAGEDAV+RIWD+ETGKL
Sbjct: 121  AIHVKRIANDPSQQIGESVLLIKGPQGRINRAIWGPLNTTIISAGEDAVIRIWDSETGKL 180

Query: 707  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 528
            ++ESDKE+GH+KT+TSL+KS D+SHFLTGS DKSARLWD RSL LIKTYVTE PVNAV +
Sbjct: 181  LQESDKESGHKKTVTSLAKSADDSHFLTGSLDKSARLWDTRSLTLIKTYVTERPVNAVTM 240

Query: 527  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALVFNPDG 348
            SPLLDHVVIGGGQDAS+VT TD RAGKFEAKFF KILQEEIGGVKGHFGPINAL FNPDG
Sbjct: 241  SPLLDHVVIGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 347  RSFSSGGEDGYIRLHHFDPDYFNIKI 270
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326


>ref|XP_004136687.1| PREDICTED: eukaryotic translation initiation factor 3 subunit I-like
            [Cucumis sativus] gi|449494685|ref|XP_004159618.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit I-like [Cucumis sativus]
          Length = 326

 Score =  554 bits (1428), Expect = e-155
 Identities = 262/326 (80%), Positives = 295/326 (90%)
 Frame = -1

Query: 1247 MRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERLGTYIGHNGTVWCCDV 1068
            MRPILMKGHERPLT+L YN +GDLLFSC KDHNP VW+ADNGERLGTY GHNG VWCCDV
Sbjct: 1    MRPILMKGHERPLTFLKYNRDGDLLFSCAKDHNPTVWYADNGERLGTYRGHNGAVWCCDV 60

Query: 1067 SRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDFGVGDGIAVMTTDMFMDHAP 888
            SRDS RLITGSADQT KLW+V+ G QLF+FNF +PAR+VDF VGD +AV+TTD FM+   
Sbjct: 61   SRDSMRLITGSADQTAKLWNVQTGQQLFSFNFDSPARAVDFSVGDKLAVITTDPFMELPS 120

Query: 887  AIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIISAGEDAVVRIWDTETGKL 708
            AIHVKRIA+DPSEQ+G+S+L +K P+G+INRAV+GPLNKTIISAGEDAVVRIWD+ETGKL
Sbjct: 121  AIHVKRIARDPSEQTGESVLLLKGPQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKL 180

Query: 707  IKESDKETGHQKTITSLSKSKDESHFLTGSHDKSARLWDIRSLALIKTYVTESPVNAVDI 528
            +KESDKE GH+KT+TSL+KS D SHF+TGS DKSA+LWD R+L LIKTYVTE PVNAV +
Sbjct: 181  LKESDKEIGHKKTVTSLTKSSDGSHFITGSLDKSAKLWDTRTLTLIKTYVTERPVNAVTM 240

Query: 527  SPLLDHVVIGGGQDASSVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALVFNPDG 348
            SPLLDHVV+GGGQDAS+VT TD RAGKFEAKF+ KILQEEIGGVKGHFGPINAL FNPDG
Sbjct: 241  SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDG 300

Query: 347  RSFSSGGEDGYIRLHHFDPDYFNIKI 270
            +SFSSGGEDGY+RLHHFDPDYFNIKI
Sbjct: 301  KSFSSGGEDGYVRLHHFDPDYFNIKI 326



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 55/189 (29%), Positives = 78/189 (41%), Gaps = 13/189 (6%)
 Frame = -1

Query: 1259 ETTSMRPILMKGHERPLTYLVYNIEGDLLFSCGKDHNPNVWFADNGERL---GTYIGHNG 1089
            E T    +L+KG +  +   V+      + S G+D    +W ++ G+ L      IGH  
Sbjct: 133  EQTGESVLLLKGPQGRINRAVWGPLNKTIISAGEDAVVRIWDSETGKLLKESDKEIGHKK 192

Query: 1088 TVWCCDVSRDSKRLITGSADQTVKLWDVKNGSQLFTFNFGAPARSVDF----------GV 939
            TV     S D    ITGS D++ KLWD +  + + T+    P  +V            G 
Sbjct: 193  TVTSLTKSSDGSHFITGSLDKSAKLWDTRTLTLIKTYVTERPVNAVTMSPLLDHVVLGGG 252

Query: 938  GDGIAVMTTDMFMDHAPAIHVKRIAQDPSEQSGKSILEIKSPRGKINRAVFGPLNKTIIS 759
             D  AV TTD       A    +I Q+        I  +K   G IN   F P  K+  S
Sbjct: 253  QDASAVTTTDHRAGKFEAKFYDKILQE-------EIGGVKGHFGPINALAFNPDGKSFSS 305

Query: 758  AGEDAVVRI 732
             GED  VR+
Sbjct: 306  GGEDGYVRL 314


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