BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007964
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30093.3| unnamed protein product [Vitis vinifera]              238   2e-60
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I...   238   2e-60
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   234   2e-59
ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|2...   234   3e-59
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   231   3e-58

>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  238 bits (607), Expect = 2e-60
 Identities = 119/209 (56%), Positives = 149/209 (71%)
 Frame = +2

Query: 95  CLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 274
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180

Query: 275 ISLPLLSDSSKKILVIFCGEEVVKLAMVRNIFNQIANSQNLNRLMLILQNKITAQARQAL 454
           IS  L SD SKKILVIFCG +VVK+  +R+I  QI N  +L++L+L+LQN IT+QA +A+
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240

Query: 455 AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDAVA 634
            +   + E FQITDLLVNI KH L P                YS+ E Q+PRML+ DA+A
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 300

Query: 635 RYYGLEKGQVVKVTSDDDVAESHATYRCV 721
           RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 301 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 329


>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Vitis vinifera]
          Length = 229

 Score =  238 bits (607), Expect = 2e-60
 Identities = 119/209 (56%), Positives = 149/209 (71%)
 Frame = +2

Query: 95  CLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEHIR 274
           CLS+F+D G +ESHRYYLARRT LEMLRDRGY +P  D+D+SLQ FRS Y Q P+ + +R
Sbjct: 20  CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79

Query: 275 ISLPLLSDSSKKILVIFCGEEVVKLAMVRNIFNQIANSQNLNRLMLILQNKITAQARQAL 454
           IS  L SD SKKILVIFCG +VVK+  +R+I  QI N  +L++L+L+LQN IT+QA +A+
Sbjct: 80  ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139

Query: 455 AICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDAVA 634
            +   + E FQITDLLVNI KH L P                YS+ E Q+PRML+ DA+A
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIA 199

Query: 635 RYYGLEKGQVVKVTSDDDVAESHATYRCV 721
           RYYGLEKGQVVKV  + ++  SH TYRCV
Sbjct: 200 RYYGLEKGQVVKVIYNGEITGSHVTYRCV 228


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  234 bits (598), Expect = 2e-59
 Identities = 119/218 (54%), Positives = 152/218 (69%), Gaps = 1/218 (0%)
 Frame = +2

Query: 71  DEKMEQG-GCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYG 247
           +E+ EQ  GCLS F+D GSVESHRYYL+RRTTLEML+DRGY +P  ++DLSL  FR  +G
Sbjct: 19  EEEAEQAKGCLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHG 78

Query: 248 QSPNLEHIRISLPLLSDSSKKILVIFCGEEVVKLAMVRNIFNQIANSQNLNRLMLILQNK 427
           Q P+ + +R+SL   ++SSK+ILVIFCG  VVK+  +RN   QI N   L  L+LI++N 
Sbjct: 79  QFPDPDRLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENH 138

Query: 428 ITAQARQALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIP 607
           IT+QA +A+ +   K E FQITDLLVNI KH L P                Y++ E Q+P
Sbjct: 139 ITSQALKAVNLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLP 198

Query: 608 RMLETDAVARYYGLEKGQVVKVTSDDDVAESHATYRCV 721
           RML+TDA+ARYYGLE+GQVVKVT   +V + H TYRCV
Sbjct: 199 RMLQTDAIARYYGLERGQVVKVTYSGEVTQMHVTYRCV 236


>ref|XP_002323257.1| predicted protein [Populus trichocarpa] gi|222867887|gb|EEF05018.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  234 bits (597), Expect = 3e-59
 Identities = 117/211 (55%), Positives = 149/211 (70%)
 Frame = +2

Query: 89  GGCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPNLEH 268
           G CLS+F+D GS ESHRYYL+RRT LEML+DRGY VP +++D+SLQ FR  YGQ+P++E 
Sbjct: 5   GRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIEL 64

Query: 269 IRISLPLLSDSSKKILVIFCGEEVVKLAMVRNIFNQIANSQNLNRLMLILQNKITAQARQ 448
           ++ S    SD SK++LVIFCG  VVK+ M+R I  QI +  +L  L+L+LQN IT QA +
Sbjct: 65  LKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITNQAMK 124

Query: 449 ALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLETDA 628
           AL + + K E FQITDLLVNI KH L P                YS+ E Q+PR+L+ DA
Sbjct: 125 ALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSIEEKQLPRLLKKDA 184

Query: 629 VARYYGLEKGQVVKVTSDDDVAESHATYRCV 721
           ++RYYGLE+GQVVKVT D D+  SH TYRCV
Sbjct: 185 ISRYYGLERGQVVKVTYDGDITGSHVTYRCV 215


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  231 bits (588), Expect = 3e-58
 Identities = 114/214 (53%), Positives = 150/214 (70%)
 Frame = +2

Query: 80  MEQGGCLSAFIDTGSVESHRYYLARRTTLEMLRDRGYDVPDADLDLSLQAFRSTYGQSPN 259
           +E G CLS++ID G+ ESHRY+L+RRT +EML+DRGY +   ++D SLQ FR T+GQ P+
Sbjct: 13  VEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPD 72

Query: 260 LEHIRISLPLLSDSSKKILVIFCGEEVVKLAMVRNIFNQIANSQNLNRLMLILQNKITAQ 439
           ++ +++S    SD SK++LV+FCG   VK+  +RNI  QIAN  +L+ L+LI+QN+IT Q
Sbjct: 73  VDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQ 132

Query: 440 ARQALAICRVKTETFQITDLLVNIMKHFLMPXXXXXXXXXXXXXXXXYSVGENQIPRMLE 619
           A +A+ +   K E FQITDLLVNI KH L P                YS+ E Q+PRML 
Sbjct: 133 AMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLR 192

Query: 620 TDAVARYYGLEKGQVVKVTSDDDVAESHATYRCV 721
           TDA+ARYYGLEKGQVVKVT D D+  +H TYRCV
Sbjct: 193 TDAIARYYGLEKGQVVKVTYDGDMTRAHITYRCV 226