BLASTX nr result

ID: Coptis23_contig00007959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007959
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273627.2| PREDICTED: diphthamide biosynthesis protein ...   388   e-106
ref|XP_002326199.1| predicted protein [Populus trichocarpa] gi|2...   367   e-100
ref|XP_002530564.1| diphteria toxin resistance protein 2, dph2, ...   359   4e-98
ref|XP_003588543.1| Diphthamide biosynthesis protein 2 containin...   355   2e-96
ref|XP_003546007.1| PREDICTED: diphthamide biosynthesis protein ...   350   4e-94

>ref|XP_002273627.2| PREDICTED: diphthamide biosynthesis protein 2-like [Vitis vinifera]
            gi|296084273|emb|CBI24661.3| unnamed protein product
            [Vitis vinifera]
          Length = 506

 Score =  388 bits (996), Expect(2) = e-106
 Identities = 203/310 (65%), Positives = 238/310 (76%), Gaps = 3/310 (0%)
 Frame = -2

Query: 1316 IGGSKPDSALHYANVIQSVMDPSEDDKAFNGQLESYGSAHGSFDKCKQIGVDVAENRYGI 1137
            + GS  +   H+A V+ SVM+PS+D    NG L S GS   +    K  G      RY I
Sbjct: 160  LSGSTSNLEFHFAEVMCSVMNPSKDCTTSNGHLGSVGSFTANEGFGKATGT-----RYSI 214

Query: 1136 GGLTWDLPEGDKMEEYLIFWIGCDNAAFTNVVLTFNSSEIVRYDPVMNHLVKDMSQQKKI 957
            GGL W+LPEG +ME+YL+ WIG DN+AF NVVLTFN  +IVRYD V N LV D+SQQ++I
Sbjct: 215  GGLAWNLPEGHRMEDYLLVWIGADNSAFANVVLTFNGCDIVRYDAVDNRLVTDLSQQRRI 274

Query: 956  LMRRYYLVEKAKDSNIIGILVGTLGVAGYRCMIHQMKELITRAGKKAYTLVMGKPNPAKL 777
            L RRYYLVEKAKDSNIIG+LVGTLGVAGY  MI QMKELI  AGKKAYTLVMG+PNPAKL
Sbjct: 275  LKRRYYLVEKAKDSNIIGLLVGTLGVAGYLHMIRQMKELIAAAGKKAYTLVMGRPNPAKL 334

Query: 776  ANFPECDIFIYVSCAQTALFDSKEFLAPVITPFEATLAFNRGSRWMGSYVLEFRDLIDSF 597
            ANFPECD+FIYVSCAQTAL DSKEFLAPVITPFEA LAFNRGS+W G+YV+EFRDLI S 
Sbjct: 335  ANFPECDVFIYVSCAQTALLDSKEFLAPVITPFEAMLAFNRGSQWTGAYVMEFRDLISSS 394

Query: 596  PLEV-NGSSEARFSFFKGGYVEDVELQ--ANGVDEEERATTLAEVTQKALQVRDKYSNSI 426
            P+EV N S EARFSF +GGYVED +L+   +  ++E+ A  LA  T+KALQVRDK+ NS+
Sbjct: 395  PVEVRNQSEEARFSFLQGGYVEDFDLKETEDAEEDEDGALALAYATEKALQVRDKHPNSL 454

Query: 425  DRGIAESGVE 396
             +G A+SG E
Sbjct: 455  IKGTAKSGGE 464



 Score = 23.9 bits (50), Expect(2) = e-106
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 280 FVVGRTGKASGY 245
           +++GR GKASGY
Sbjct: 486 YLIGRVGKASGY 497


>ref|XP_002326199.1| predicted protein [Populus trichocarpa] gi|222833392|gb|EEE71869.1|
            predicted protein [Populus trichocarpa]
          Length = 496

 Score =  367 bits (941), Expect(2) = e-100
 Identities = 189/309 (61%), Positives = 229/309 (74%), Gaps = 1/309 (0%)
 Frame = -2

Query: 1319 TIGGSKPDSALHYANVIQSVMDPSEDDKAFNGQLESYGSAHGSFDKCKQIGVDVAENRYG 1140
            T+ GSK  +  H+A V+  +++P +  K   G   S G    S     ++GV  A +R+ 
Sbjct: 154  TLSGSKTKTVFHFAEVMCPLINPPDCHKDSGGLPRSVGDGEVS----NELGV-AACSRHT 208

Query: 1139 IGGLTWDLPEGDKMEEYLIFWIGCDNAAFTNVVLTFNSSEIVRYDPVMNHLVKDMSQQKK 960
            IGGL+W+LP G KME+YL+ WIG DN+AF NVVLTFN  EIVRYD   N L  D+SQQ++
Sbjct: 209  IGGLSWELPSGQKMEDYLLLWIGSDNSAFANVVLTFNGCEIVRYDANGNFLGTDLSQQRR 268

Query: 959  ILMRRYYLVEKAKDSNIIGILVGTLGVAGYRCMIHQMKELITRAGKKAYTLVMGKPNPAK 780
            IL RRYYLVEKAKD+NI+GILVGTLGVAGY  MIHQMK+LIT AGKK YTLVMG+PNPAK
Sbjct: 269  ILKRRYYLVEKAKDANIVGILVGTLGVAGYLNMIHQMKDLITGAGKKVYTLVMGRPNPAK 328

Query: 779  LANFPECDIFIYVSCAQTALFDSKEFLAPVITPFEATLAFNRGSRWMGSYVLEFRDLIDS 600
            LANFPECD+FIYVSCAQTAL DSK+F APVITPFEA LAFNRGS W G+YV+EFRDLI S
Sbjct: 329  LANFPECDVFIYVSCAQTALLDSKDFYAPVITPFEAMLAFNRGSEWTGAYVMEFRDLITS 388

Query: 599  FPLEVNG-SSEARFSFFKGGYVEDVELQANGVDEEERATTLAEVTQKALQVRDKYSNSID 423
             P+EV   S EARFSF +G YVED +LQ    +E E    LA  T+KAL+++D+ SNS+ 
Sbjct: 389  SPVEVKSYSEEARFSFVQGRYVEDFDLQEKKEEENEGVLALANATEKALKLQDRSSNSLT 448

Query: 422  RGIAESGVE 396
            +G   SG +
Sbjct: 449  KGTVRSGAD 457



 Score = 25.8 bits (55), Expect(2) = e-100
 Identities = 9/12 (75%), Positives = 12/12 (100%)
 Frame = -3

Query: 280 FVVGRTGKASGY 245
           +++GRTGKASGY
Sbjct: 479 YLIGRTGKASGY 490


>ref|XP_002530564.1| diphteria toxin resistance protein 2, dph2, putative [Ricinus
            communis] gi|223529863|gb|EEF31794.1| diphteria toxin
            resistance protein 2, dph2, putative [Ricinus communis]
          Length = 499

 Score =  359 bits (921), Expect(2) = 4e-98
 Identities = 186/301 (61%), Positives = 226/301 (75%), Gaps = 1/301 (0%)
 Frame = -2

Query: 1295 SALHYANVIQSVMDPSEDDKAFNGQLESYGSAHGSFDKCKQIGVDVAENRYGIGGLTWDL 1116
            S LH+A+V+ S ++PS + K  +      G    + D  +  G      R+ IGGL WDL
Sbjct: 165  SELHFADVMCSAINPSNNQKKSDEPARLIGDCVATNDVGEAAGC-----RHKIGGLIWDL 219

Query: 1115 PEGDKMEEYLIFWIGCDNAAFTNVVLTFNSSEIVRYDPVMNHLVKDMSQQKKILMRRYYL 936
              G +ME+YL+ WIG  N+AF NVVLTFN  EIVRYD   + LV D+SQQ++IL RRYYL
Sbjct: 220  SRGQRMEDYLLVWIGSGNSAFANVVLTFNGCEIVRYDAKESRLVTDLSQQRRILKRRYYL 279

Query: 935  VEKAKDSNIIGILVGTLGVAGYRCMIHQMKELITRAGKKAYTLVMGKPNPAKLANFPECD 756
            VEKAKD+NI+GILVGTLGVAGY  MIHQMK+LIT AGKKAYTLVMG+PNPAKLANFPECD
Sbjct: 280  VEKAKDANIVGILVGTLGVAGYLDMIHQMKDLITSAGKKAYTLVMGRPNPAKLANFPECD 339

Query: 755  IFIYVSCAQTALFDSKEFLAPVITPFEATLAFNRGSRWMGSYVLEFRDLIDSFPLE-VNG 579
            IFIYVSCAQTAL DSKEFLAPVITPFEA +AFNRGS+W G+YV+EFRDLIDS P+E +  
Sbjct: 340  IFIYVSCAQTALLDSKEFLAPVITPFEAMIAFNRGSQWTGAYVMEFRDLIDSSPVEAMIK 399

Query: 578  SSEARFSFFKGGYVEDVELQANGVDEEERATTLAEVTQKALQVRDKYSNSIDRGIAESGV 399
             +EARFSF +G YVED +LQ N ++E+     LA  T+KALQ+ D+ S S+ +G  +SG 
Sbjct: 400  PAEARFSFIQGRYVEDFDLQEN-IEEDNEGLALANATEKALQLHDRNSTSLIKGTIKSGA 458

Query: 398  E 396
            E
Sbjct: 459  E 459



 Score = 27.3 bits (59), Expect(2) = 4e-98
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = -3

Query: 283 SFVVGRTGKASGY 245
           +F++GRTGKASGY
Sbjct: 480 AFLIGRTGKASGY 492


>ref|XP_003588543.1| Diphthamide biosynthesis protein 2 containing protein expressed
            [Medicago truncatula] gi|355477591|gb|AES58794.1|
            Diphthamide biosynthesis protein 2 containing protein
            expressed [Medicago truncatula]
          Length = 612

 Score =  355 bits (911), Expect(2) = 2e-96
 Identities = 187/304 (61%), Positives = 221/304 (72%)
 Frame = -2

Query: 1307 SKPDSALHYANVIQSVMDPSEDDKAFNGQLESYGSAHGSFDKCKQIGVDVAENRYGIGGL 1128
            S P S +H+A+V    M PS+D K  N   E      G  D     G   A   Y IGGL
Sbjct: 275  SDPKSEVHFADVPSPYMFPSKDTKKLNDLQEE---TCGCGDNSSSDGASGAA--YSIGGL 329

Query: 1127 TWDLPEGDKMEEYLIFWIGCDNAAFTNVVLTFNSSEIVRYDPVMNHLVKDMSQQKKILMR 948
            TW L EG  ME+Y +FWIG DN+AF NVVL FN+ EIVRYD   + +V D+SQQ++IL R
Sbjct: 330  TWKLLEGQSMEDYSLFWIGHDNSAFANVVLRFNACEIVRYDATKSQMVADLSQQRRILKR 389

Query: 947  RYYLVEKAKDSNIIGILVGTLGVAGYRCMIHQMKELITRAGKKAYTLVMGKPNPAKLANF 768
            RYYLVE+AKD+NI+GILVGTLGVAGY  +I+QM  LIT AGKKAYTLVMGKPNPAKLANF
Sbjct: 390  RYYLVERAKDANIVGILVGTLGVAGYLHIINQMMGLITAAGKKAYTLVMGKPNPAKLANF 449

Query: 767  PECDIFIYVSCAQTALFDSKEFLAPVITPFEATLAFNRGSRWMGSYVLEFRDLIDSFPLE 588
            PECD+F+YVSCAQTAL DSK++LAPVITPFEAT+AFNRGS+W G+YV+ F DLI+   ++
Sbjct: 450  PECDVFLYVSCAQTALLDSKDYLAPVITPFEATIAFNRGSQWTGAYVMGFGDLINLPQVQ 509

Query: 587  VNGSSEARFSFFKGGYVEDVELQANGVDEEERATTLAEVTQKALQVRDKYSNSIDRGIAE 408
            V    EARFSF KGGYVED E Q N V+EE     LA  T+KALQ+RD   NSI +G A+
Sbjct: 510  VGNQEEARFSFLKGGYVEDFENQENNVEEEREDLALANATEKALQLRDN-CNSIIKGGAK 568

Query: 407  SGVE 396
            SG E
Sbjct: 569  SGAE 572



 Score = 25.4 bits (54), Expect(2) = 2e-96
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -3

Query: 286 RSFVVGRTGKASGY 245
           +SFV+GR G+A+GY
Sbjct: 592 QSFVIGRKGRAAGY 605


>ref|XP_003546007.1| PREDICTED: diphthamide biosynthesis protein 2-like [Glycine max]
          Length = 485

 Score =  350 bits (899), Expect = 4e-94
 Identities = 187/318 (58%), Positives = 230/318 (72%), Gaps = 3/318 (0%)
 Frame = -2

Query: 1340 KEAVIKLTIGGS-KPDSALHYANVIQSVMDPSEDDKAFNGQLESYGSAHGSFDKCKQIGV 1164
            KEA+++ ++     P S +H+A+V  SVM PS+D K  N   E     +G+         
Sbjct: 141  KEALLESSMSCRFDPKSEVHFADVPSSVMFPSKDIKKINVLQEPVSDCNGA--------- 191

Query: 1163 DVAENRYGIGGLTWDLPEGDKMEEYLIFWIGCDNAAFTNVVLTFNSSEIVRYDPVMNHLV 984
              +   Y IGGLTW LPEG  M++YL+FWIG D++AF NVVLTFN+ EIVRYD   N +V
Sbjct: 192  --SGTMYSIGGLTWKLPEGQSMDDYLVFWIGHDDSAFANVVLTFNACEIVRYDANENRMV 249

Query: 983  KDMSQQKKILMRRYYLVEKAKDSNIIGILVGTLGVAGYRCMIHQMKELITRAGKKAYTLV 804
             D+ Q ++IL RRYYLVE+AKD+NI+GILVGTLGVAGY  +I+QM ELIT AGKKAYTLV
Sbjct: 250  TDLFQHRRILKRRYYLVERAKDANIVGILVGTLGVAGYLHIINQMMELITGAGKKAYTLV 309

Query: 803  MGKPNPAKLANFPECDIFIYVSCAQTALFDSKEFLAPVITPFEATLAFNRGSRWMGSYVL 624
            MG+PNPAKLANFPECD+F+YVSCAQTAL DSKE+LAPVITPFEA +AFNRGS+W G+YV+
Sbjct: 310  MGRPNPAKLANFPECDVFLYVSCAQTALLDSKEYLAPVITPFEAMIAFNRGSQWTGAYVM 369

Query: 623  EFRDLIDSFPLEVNG--SSEARFSFFKGGYVEDVELQANGVDEEERATTLAEVTQKALQV 450
            EFRDLI+   + V      EARFSF KGGYVED E Q N V+EE     L   T+KALQ+
Sbjct: 370  EFRDLINLPQMGVGNQEEEEARFSFLKGGYVEDFENQEN-VEEERETLALVNATEKALQL 428

Query: 449  RDKYSNSIDRGIAESGVE 396
            R+  SN + +G A SG E
Sbjct: 429  RNN-SNVLMKGSARSGAE 445


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