BLASTX nr result

ID: Coptis23_contig00007939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007939
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517194.1| protein binding protein, putative [Ricinus c...   116   7e-24
ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|2...   116   7e-24
ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   115   1e-23
ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
gb|ABR18468.1| unknown [Picea sitchensis]                              97   4e-18

>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
           gi|223543829|gb|EEF45357.1| protein binding protein,
           putative [Ricinus communis]
          Length = 414

 Score =  116 bits (291), Expect = 7e-24
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +1

Query: 1   ASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSG 180
           AS+RYKES++KST+G KEKLLARNNSVKELS+ VQRE+SAGIAGVARM ERLD T K +G
Sbjct: 272 ASSRYKESISKSTQGIKEKLLARNNSVKELSRGVQREMSAGIAGVARMFERLDLTPKRTG 331

Query: 181 NSSPVSGRAEGTSNVSQNGKGV 246
            SSPVSG  EGTS +S  GKG+
Sbjct: 332 ASSPVSGCREGTSELSLKGKGM 353


>ref|XP_002312516.1| predicted protein [Populus trichocarpa] gi|222852336|gb|EEE89883.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  116 bits (291), Expect = 7e-24
 Identities = 63/82 (76%), Positives = 67/82 (81%)
 Frame = +1

Query: 1   ASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSG 180
           ASARYKESL+K TRG KEKLLARNNSVKELSKEVQRE+SAGIAGVARM+ERLD TSK +G
Sbjct: 217 ASARYKESLSKGTRGMKEKLLARNNSVKELSKEVQREMSAGIAGVARMIERLDLTSKRAG 276

Query: 181 NSSPVSGRAEGTSNVSQNGKGV 246
            S   S    GTSN S  GKGV
Sbjct: 277 PSMSDSDFTRGTSNFSWKGKGV 298


>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
           gi|297737001|emb|CBI26202.3| unnamed protein product
           [Vitis vinifera]
          Length = 391

 Score =  115 bits (289), Expect = 1e-23
 Identities = 60/82 (73%), Positives = 67/82 (81%)
 Frame = +1

Query: 1   ASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSG 180
           ASARYKES++K TRGFKEKLL+RNNSVKELSK VQRE+SAGIA V RM+ERLDP  K +G
Sbjct: 267 ASARYKESISKGTRGFKEKLLSRNNSVKELSKGVQREMSAGIASVTRMIERLDPILKRTG 326

Query: 181 NSSPVSGRAEGTSNVSQNGKGV 246
            S+P S    GTSNVS  GKGV
Sbjct: 327 ASNPDSSFTGGTSNVSHKGKGV 348


>ref|XP_002314719.1| predicted protein [Populus trichocarpa] gi|222863759|gb|EEF00890.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  114 bits (285), Expect = 3e-23
 Identities = 61/82 (74%), Positives = 68/82 (82%)
 Frame = +1

Query: 1   ASARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSG 180
           ASARYK+SL+KSTRG KEKL+ARNNSVKELSKEVQRE+SAGIAGVARM+ERLD T+K +G
Sbjct: 279 ASARYKDSLSKSTRGIKEKLVARNNSVKELSKEVQREMSAGIAGVARMIERLDLTTKRTG 338

Query: 181 NSSPVSGRAEGTSNVSQNGKGV 246
            S   SG    TSN S  GKGV
Sbjct: 339 PSMSDSGFTGATSNFSWKGKGV 360


>gb|ABR18468.1| unknown [Picea sitchensis]
          Length = 423

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 50/72 (69%), Positives = 61/72 (84%)
 Frame = +1

Query: 4   SARYKESLTKSTRGFKEKLLARNNSVKELSKEVQREVSAGIAGVARMVERLDPTSKNSGN 183
           S RYKES+++STRGFKEK  ARNN+V EL +EVQREVSAGIAGVAR++ERLDP+SKN+G 
Sbjct: 280 STRYKESISRSTRGFKEKFFARNNAVTELGREVQREVSAGIAGVARIMERLDPSSKNNGA 339

Query: 184 SSPVSGRAEGTS 219
           S+  S   EG+S
Sbjct: 340 SA--SDNMEGSS 349


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