BLASTX nr result

ID: Coptis23_contig00007932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007932
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327308.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83
ref|XP_004141537.1| PREDICTED: SCY1-like protein 2-like [Cucumis...   311   1e-82
ref|XP_002273755.1| PREDICTED: SCY1-like protein 2 [Vitis vinife...   311   1e-82
ref|NP_173700.2| protein kinase-like protein with ARM repeat dom...   308   1e-81
ref|XP_002890539.1| kinase family protein [Arabidopsis lyrata su...   306   2e-81

>ref|XP_002327308.1| predicted protein [Populus trichocarpa] gi|222835678|gb|EEE74113.1|
           predicted protein [Populus trichocarpa]
          Length = 931

 Score =  313 bits (801), Expect = 3e-83
 Identities = 158/223 (70%), Positives = 179/223 (80%), Gaps = 1/223 (0%)
 Frame = +1

Query: 55  MALNMKSFTQALAKTAAVIEKXXXXXXXXXXGPKALQDYELINQIGSGGPGLVWKLYSAK 234
           M+LNMK+FTQALAKTAAVIEK          GPK LQDY+L++QIGS GPGL WKLYSAK
Sbjct: 1   MSLNMKTFTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYDLLHQIGSAGPGLAWKLYSAK 60

Query: 235 S-RSSSIPSQYPIVCVWVLDKKSVSETRARSGLSKXXXXXXXXXXXXXXXKLVRLRHPGV 411
           + R S+   QYP VCVWVLDKK++SE RAR+GL+K               +LVR+RHPGV
Sbjct: 61  AARESTRTHQYPTVCVWVLDKKALSEARARAGLTKVAEDTFLDVIRADAARLVRIRHPGV 120

Query: 412 VHVVQGLDETKNAMAMVTEPLFASVANALGLVDNIAKVPKELKGMEMGLLEVKHGMLQVA 591
           VHVVQ LDE KNAMAMVTEPLFASVANA+G ++N+ KVPKELKGMEMGLLEVKHG+LQ+A
Sbjct: 121 VHVVQALDENKNAMAMVTEPLFASVANAIGNLENVGKVPKELKGMEMGLLEVKHGLLQIA 180

Query: 592 ESLDFLHNNARLIHRAISPETVFITSSGAWKLGGFGFATSADQ 720
           ESLDFLHNNA LIHRAISPE + ITSSGAWKLGGFGFA + DQ
Sbjct: 181 ESLDFLHNNAHLIHRAISPENILITSSGAWKLGGFGFAITTDQ 223


>ref|XP_004141537.1| PREDICTED: SCY1-like protein 2-like [Cucumis sativus]
          Length = 931

 Score =  311 bits (796), Expect = 1e-82
 Identities = 158/222 (71%), Positives = 176/222 (79%)
 Frame = +1

Query: 55  MALNMKSFTQALAKTAAVIEKXXXXXXXXXXGPKALQDYELINQIGSGGPGLVWKLYSAK 234
           MALNMK+ TQALAKTAAVIEK          GPKALQDYEL++QIGS GPG+ WKLYSAK
Sbjct: 1   MALNMKTLTQALAKTAAVIEKTVHTTVQEVTGPKALQDYELLDQIGSAGPGMAWKLYSAK 60

Query: 235 SRSSSIPSQYPIVCVWVLDKKSVSETRARSGLSKXXXXXXXXXXXXXXXKLVRLRHPGVV 414
           +R SS P QYP VCVWVLDK+ +SETR R+GLSK               +LVRLRHPGVV
Sbjct: 61  ARDSSRPQQYPTVCVWVLDKRILSETRTRAGLSKSVEDSFLDLIRADAGRLVRLRHPGVV 120

Query: 415 HVVQGLDETKNAMAMVTEPLFASVANALGLVDNIAKVPKELKGMEMGLLEVKHGMLQVAE 594
           HVVQ LDE KNAMAMVTEPLFASVAN +G V+NIAKVPKEL G+EMGLLE+KHG+LQ+AE
Sbjct: 121 HVVQALDENKNAMAMVTEPLFASVANVIGNVENIAKVPKELNGLEMGLLEIKHGLLQLAE 180

Query: 595 SLDFLHNNARLIHRAISPETVFITSSGAWKLGGFGFATSADQ 720
           SL+FLH+NA LIHRAISPE V ITS+GAWKL GF FA  ADQ
Sbjct: 181 SLNFLHSNAHLIHRAISPENVLITSNGAWKLAGFCFAIPADQ 222


>ref|XP_002273755.1| PREDICTED: SCY1-like protein 2 [Vitis vinifera]
           gi|297734819|emb|CBI17053.3| unnamed protein product
           [Vitis vinifera]
          Length = 931

 Score =  311 bits (796), Expect = 1e-82
 Identities = 159/223 (71%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
 Frame = +1

Query: 55  MALNMKSFTQALAKTAAVIEKXXXXXXXXXXGPKALQDYELINQIGSGGPGLVWKLYSAK 234
           MALNMK+ TQALAKTAAVIEK          GPK LQDYEL++QIG+ GPGL WKLYS K
Sbjct: 1   MALNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGTAGPGLAWKLYSGK 60

Query: 235 SRS-SSIPSQYPIVCVWVLDKKSVSETRARSGLSKXXXXXXXXXXXXXXXKLVRLRHPGV 411
           +R  S++  QYP VCVWVLDKK++SE R R+GLS+               +LVRLRHPGV
Sbjct: 61  ARGGSAVSQQYPTVCVWVLDKKALSEARTRAGLSRAAEESFLDVIRADAGRLVRLRHPGV 120

Query: 412 VHVVQGLDETKNAMAMVTEPLFASVANALGLVDNIAKVPKELKGMEMGLLEVKHGMLQVA 591
           VHVVQ LDE KNAMAMVTEPLFASVANALG ++ I KVPKELKGMEMGLLEVKHG+LQV+
Sbjct: 121 VHVVQALDENKNAMAMVTEPLFASVANALGSLEGIGKVPKELKGMEMGLLEVKHGLLQVS 180

Query: 592 ESLDFLHNNARLIHRAISPETVFITSSGAWKLGGFGFATSADQ 720
           E+L+FLHNNARLIHRAISPETV ITSSGAWKL GFGFA S+DQ
Sbjct: 181 ETLEFLHNNARLIHRAISPETVVITSSGAWKLSGFGFAISSDQ 223


>ref|NP_173700.2| protein kinase-like protein with ARM repeat domain-containing
           protein [Arabidopsis thaliana]
           gi|332192177|gb|AEE30298.1| protein kinase-like protein
           with ARM repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 913

 Score =  308 bits (788), Expect = 1e-81
 Identities = 154/222 (69%), Positives = 176/222 (79%)
 Frame = +1

Query: 55  MALNMKSFTQALAKTAAVIEKXXXXXXXXXXGPKALQDYELINQIGSGGPGLVWKLYSAK 234
           M++NM++ TQALAKTAAVIEK          GPK LQDYEL++QIGSGGPGL WKLYSAK
Sbjct: 1   MSINMRTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSGGPGLAWKLYSAK 60

Query: 235 SRSSSIPSQYPIVCVWVLDKKSVSETRARSGLSKXXXXXXXXXXXXXXXKLVRLRHPGVV 414
           +R S+ P QYP VCVWVLDK+++SE RAR+GLSK               KLVRLRHPGVV
Sbjct: 61  ARDSTRPQQYPTVCVWVLDKRALSEARARAGLSKAAEDAFLDLIRADSGKLVRLRHPGVV 120

Query: 415 HVVQGLDETKNAMAMVTEPLFASVANALGLVDNIAKVPKELKGMEMGLLEVKHGMLQVAE 594
           HVVQ LDE KNAMAMVTEPLFASVANALG V+N+  VPK+LK MEM LLEVKHG+LQ+AE
Sbjct: 121 HVVQALDENKNAMAMVTEPLFASVANALGNVENVDNVPKDLKSMEMSLLEVKHGLLQIAE 180

Query: 595 SLDFLHNNARLIHRAISPETVFITSSGAWKLGGFGFATSADQ 720
           +L+FLHNNA LIHRA+SPE VFITS+G+WKL GFGFA S  Q
Sbjct: 181 TLNFLHNNAHLIHRAVSPENVFITSAGSWKLAGFGFAISQAQ 222


>ref|XP_002890539.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336381|gb|EFH66798.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 912

 Score =  306 bits (785), Expect = 2e-81
 Identities = 153/222 (68%), Positives = 176/222 (79%)
 Frame = +1

Query: 55  MALNMKSFTQALAKTAAVIEKXXXXXXXXXXGPKALQDYELINQIGSGGPGLVWKLYSAK 234
           M++NM++ TQALAKTAAVIEK          GPK LQDY+L++QIGSGGPGL WKLYSAK
Sbjct: 1   MSINMRTLTQALAKTAAVIEKTVQTTVQEVTGPKPLQDYDLLDQIGSGGPGLAWKLYSAK 60

Query: 235 SRSSSIPSQYPIVCVWVLDKKSVSETRARSGLSKXXXXXXXXXXXXXXXKLVRLRHPGVV 414
           +R S+ P QYP VCVWVLDK+++SE RAR+GLSK               KLVRLRHPGVV
Sbjct: 61  ARDSTRPHQYPTVCVWVLDKRALSEARARAGLSKAAEDAFLDLIRADAGKLVRLRHPGVV 120

Query: 415 HVVQGLDETKNAMAMVTEPLFASVANALGLVDNIAKVPKELKGMEMGLLEVKHGMLQVAE 594
           HVVQ LDE KNAMAMVTEPLFASVANA+G VDN+  VPK+LK MEM LLEVKHG+LQ+AE
Sbjct: 121 HVVQALDENKNAMAMVTEPLFASVANAVGNVDNVDNVPKDLKAMEMSLLEVKHGLLQIAE 180

Query: 595 SLDFLHNNARLIHRAISPETVFITSSGAWKLGGFGFATSADQ 720
           +L+FLHNNA LIHRA+SPE VFITS+G+WKL GFGFA S  Q
Sbjct: 181 TLNFLHNNAHLIHRAVSPENVFITSAGSWKLAGFGFAISEAQ 222


Top