BLASTX nr result

ID: Coptis23_contig00007909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007909
         (1180 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263...   377   e-102
ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101
ref|XP_002312151.1| predicted protein [Populus trichocarpa] gi|2...   362   8e-98
ref|XP_004138425.1| PREDICTED: uncharacterized protein LOC101204...   348   2e-93
ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254...   315   1e-83

>ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263846 [Vitis vinifera]
            gi|297736627|emb|CBI25498.3| unnamed protein product
            [Vitis vinifera]
          Length = 545

 Score =  377 bits (967), Expect = e-102
 Identities = 211/365 (57%), Positives = 242/365 (66%), Gaps = 3/365 (0%)
 Frame = +1

Query: 94   TMMKDKDDELALFLEMRKREKERNNLLL-HNSDEFETPLGSKPGSSPIFKIVQSAPIRKT 270
            ++MK+KD+ELALFLEMRKREKER++LLL  +S+EF+ PLG+KPGSSPIF I  S P RKT
Sbjct: 29   SVMKEKDEELALFLEMRKREKERSHLLLLQDSEEFDAPLGAKPGSSPIFNIAPSPPPRKT 88

Query: 271  PTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMDSQKTVMSQIGTPNARPTALKSRLANSH 450
              DDFLNS+NDKNDYDWLLTPPGTPLFPSLEM+SQKTVMS+IGTP ARPTALKSRLAN  
Sbjct: 89   VADDFLNSDNDKNDYDWLLTPPGTPLFPSLEMESQKTVMSRIGTPKARPTALKSRLANPQ 148

Query: 451  TEPTSRSNFVSRQPTLSPGLYXXXXXXXXXXXXXXXXXXXXPATPTGRPALXXXXXXXXX 630
             EP +RS+ VS+ P  SPGL                     PATPTGRP L         
Sbjct: 149  PEPAARSSLVSKHPASSPGL--NSSSAGIRRPSSSGGPGSRPATPTGRPTLTATTRPSRP 206

Query: 631  XXXXXXXXXXXXKPVAPPAXXXXXXXXXXXXXXXXLQASKP-TITTAKSTIPASKSIIXX 807
                        KP  P                   ++S P T +TA+S+ P S+  I  
Sbjct: 207  ATPTSRATLTSTKPTVP------------------ARSSTPVTRSTARSSTPTSRPSIPA 248

Query: 808  XXXXXXXXXXXXXXXXXXXVSNLSAPPGRS-SSVTRSGLSTTMKNPVPSRGSSPTVKSRP 984
                               VSNLSAPP +S SSVT+SG +T+ +NPVPSRGSSPTVKSRP
Sbjct: 249  SKPVSRAATPTRRPSTPSSVSNLSAPPIKSTSSVTKSGPATS-RNPVPSRGSSPTVKSRP 307

Query: 985  WKPSEMPGFSLDAPPNLRTSMPDRPVSASRGRPGAPSARSSSVEPGPTGRPRRQSCSPSR 1164
            WKP EMPG+SLDAPPNLRTS P+RPVSASRGRP AP ARSSSV+  P GRPRRQSCSP+R
Sbjct: 308  WKPLEMPGYSLDAPPNLRTSAPERPVSASRGRPSAPIARSSSVDAAPNGRPRRQSCSPAR 367

Query: 1165 GRAPN 1179
            GR PN
Sbjct: 368  GRPPN 372


>ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|222864202|gb|EEF01333.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  373 bits (957), Expect = e-101
 Identities = 214/400 (53%), Positives = 246/400 (61%), Gaps = 12/400 (3%)
 Frame = +1

Query: 16   MNRSFXXXXXXXXXXXXXXXXXNNL-GTMMKDKDDELALFLEMRKREKERNNLLL-HNSD 189
            MNRSF                   L  TMMK+K++ELALFLEM+KREKE+NNLLL +N++
Sbjct: 1    MNRSFRAQDSQMQMQAAVVKQRQQLRATMMKEKEEELALFLEMKKREKEQNNLLLINNTE 60

Query: 190  EFETPLGSKPGSSPIFKIVQSAPIRKTPTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMD 369
            EF+ PLGSK G+ PIF I  S P+RKT  DDFLNSENDKNDYDWLLTPPGTPLFPSLEM+
Sbjct: 61   EFDAPLGSKHGTLPIFNISSSTPVRKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEME 120

Query: 370  SQKTVMSQIGTPNARPTALKSRLANSHTEPTSRSNFVSRQPTLSPGLYXXXXXXXXXXXX 549
            SQKT+MSQIGTP ARPTALKSRLANS  EP +R N VS+Q   SPGL             
Sbjct: 121  SQKTIMSQIGTPKARPTALKSRLANSQQEPVARGNLVSKQSASSPGL--NSSGAAMRRPS 178

Query: 550  XXXXXXXXPATPTGRPALXXXXXXXXXXXXXXXXXXXXXKPVAPPA---XXXXXXXXXXX 720
                    P+TPTGRP +                     KP    A              
Sbjct: 179  SSGGPGSRPSTPTGRPTVTTGPKPSRSSTPTSRATLSSSKPTISAAKLTVSAAKSTTSTM 238

Query: 721  XXXXXLQASKPTITTAKSTIPASKSIIXXXXXXXXXXXXXXXXXXXXXVSNLSAPPGR-S 897
                  ++S P+ +TA+S+ P ++  I                       +LSA P + S
Sbjct: 239  KSTVPARSSTPSRSTARSSTPTARPSIPPSKSTSRAATPTRRPSTPTRSPSLSAAPVKSS 298

Query: 898  SSVTRS------GLSTTMKNPVPSRGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSMPDRP 1059
            SSVTRS         T  +NPV +RGSSPTVKSRPWKPSEMPGFSLDAPPNLRTS P+RP
Sbjct: 299  SSVTRSAPTVTKSAPTAARNPVMARGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSAPERP 358

Query: 1060 VSASRGRPGAPSARSSSVEPGPTGRPRRQSCSPSRGRAPN 1179
            +SA+RGRPGAPSARSSSVEP P GRPRRQSCSPSRGRAPN
Sbjct: 359  LSATRGRPGAPSARSSSVEPTPNGRPRRQSCSPSRGRAPN 398


>ref|XP_002312151.1| predicted protein [Populus trichocarpa] gi|222851971|gb|EEE89518.1|
            predicted protein [Populus trichocarpa]
          Length = 565

 Score =  362 bits (930), Expect = 8e-98
 Identities = 202/372 (54%), Positives = 237/372 (63%), Gaps = 11/372 (2%)
 Frame = +1

Query: 97   MMKDKDDELALFLEMRKREKERNNL-LLHNSDEFETPLGSKPGSSPIFKIVQSAPIRKTP 273
            MMK+K++ELALFLEM+KREKE+NNL L++N+++FE P GS+ G+SPIF I  S P RKT 
Sbjct: 29   MMKEKEEELALFLEMKKREKEQNNLFLINNTEDFEAPFGSRHGTSPIFNISSSTPARKTG 88

Query: 274  TDDFLNSENDKNDYDWLLTPPGTPLFPSLEMDSQKTVMSQIGTPNARPTALKSRLANSHT 453
             DDFLNSENDK+DYDWLLTPPGTPLFPSLE++SQKT+MSQIGTP A PTALKSRLA+   
Sbjct: 89   ADDFLNSENDKHDYDWLLTPPGTPLFPSLEVESQKTIMSQIGTPKACPTALKSRLASPQP 148

Query: 454  EPTSRSNFVSRQPTLSPGLYXXXXXXXXXXXXXXXXXXXXPATPTGRPALXXXXXXXXXX 633
            +P  R N VS+QP  SPGL                     P+TPTGRP L          
Sbjct: 149  DPVRRGNLVSKQPASSPGL--NSSGAAMRRPSSSGGPGSRPSTPTGRPTLTTGSKPSRSS 206

Query: 634  XXXXXXXXXXXKP---VAPPAXXXXXXXXXXXXXXXXLQASKPTITTAKSTIPASKSIIX 804
                       KP    A P                  ++S P+ +T  ST P ++  I 
Sbjct: 207  TPTSRATLSSSKPTVSAAKPTVSAAKSTTSTMKSTVPARSSTPSRSTRSST-PTARPSIP 265

Query: 805  XXXXXXXXXXXXXXXXXXXXVSNLSAPPGRSSS-VTRS------GLSTTMKNPVPSRGSS 963
                                  +LSAPP +SSS VT+S         T  +NPVPSRGSS
Sbjct: 266  PSKSTSRAATPTRRPSTPSSSPSLSAPPVKSSSLVTKSAPTVTKSAPTVARNPVPSRGSS 325

Query: 964  PTVKSRPWKPSEMPGFSLDAPPNLRTSMPDRPVSASRGRPGAPSARSSSVEPGPTGRPRR 1143
            PTVKSRPWKPSEMPGFSLDAPPNLRT++P+RP+SA+RGRPGAPSARSSSVEP P GRPRR
Sbjct: 326  PTVKSRPWKPSEMPGFSLDAPPNLRTTVPERPLSATRGRPGAPSARSSSVEPTPNGRPRR 385

Query: 1144 QSCSPSRGRAPN 1179
            QSCSPSRGR PN
Sbjct: 386  QSCSPSRGRGPN 397


>ref|XP_004138425.1| PREDICTED: uncharacterized protein LOC101204600 [Cucumis sativus]
          Length = 575

 Score =  348 bits (892), Expect = 2e-93
 Identities = 199/406 (49%), Positives = 232/406 (57%), Gaps = 18/406 (4%)
 Frame = +1

Query: 16   MNRSFXXXXXXXXXXXXXXXXXNNLGTMMKDKDDELALFLEMRKREKERNNLLLHNSDEF 195
            MNRSF                     ++MKDK++ELALFLEMRKREKERN+LL +N++EF
Sbjct: 1    MNRSFRALESQMQAPVKRQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEF 60

Query: 196  ETPLGSKPGSSPIFKIVQS-APIRKTPTDDFLNSENDKNDYDWLLTPPGTPLFPSLEMDS 372
            + PL +KPG+SPIF I  + AP RKT  DDFLNS+NDKNDYDWLLTPPGTPLFPSLE +S
Sbjct: 61   DAPLATKPGTSPIFNISATPAPTRKTGADDFLNSDNDKNDYDWLLTPPGTPLFPSLETES 120

Query: 373  QKTVMSQIGTPNARPTALKSRLANSHTEPTSRSNFVSRQPTLSPGLYXXXXXXXXXXXXX 552
            ++ +MS   TP  RP  LKSRLAN   EPT+RSN VS+QP  SPGL              
Sbjct: 121  ERVLMSH-ATPMGRPNVLKSRLANLQQEPTTRSNMVSKQPASSPGL--TSSSVGIRRPSS 177

Query: 553  XXXXXXXPATPTGRPALXXXXXXXXXXXXXXXXXXXXXKPV-----------------AP 681
                   PATPTGRP L                     KPV                 A 
Sbjct: 178  SGGPGSRPATPTGRPTLTTTSRPSRSSTPTSRATLPSNKPVVSSAKIGAASNKLSTASAK 237

Query: 682  PAXXXXXXXXXXXXXXXXLQASKPTITTAKSTIPASKSIIXXXXXXXXXXXXXXXXXXXX 861
            P                  ++S PT +TA+S+ P S+  I                    
Sbjct: 238  PTVTMTKPTVSSTKSSVPTRSSTPTRSTARSSTPTSRPTIPPPKPTSRASTPTRRPSTPS 297

Query: 862  XVSNLSAPPGRSSSVTRSGLSTTMKNPVPSRGSSPTVKSRPWKPSEMPGFSLDAPPNLRT 1041
              S+      +SSS       T  +N  PSRG+SPTVKSRPW PSEMPGF+LDAPPNLRT
Sbjct: 298  SASSAPVSLVKSSSSISKPSPTVSRNQAPSRGASPTVKSRPWNPSEMPGFTLDAPPNLRT 357

Query: 1042 SMPDRPVSASRGRPGAPSARSSSVEPGPTGRPRRQSCSPSRGRAPN 1179
            S+PDRP+S +RGRPGAPSARSSSVEP P GRPRRQSCSPSRGRAPN
Sbjct: 358  SLPDRPLSVTRGRPGAPSARSSSVEPVPNGRPRRQSCSPSRGRAPN 403


>ref|XP_002279742.2| PREDICTED: uncharacterized protein LOC100254532 [Vitis vinifera]
          Length = 516

 Score =  315 bits (808), Expect = 1e-83
 Identities = 185/361 (51%), Positives = 214/361 (59%), Gaps = 3/361 (0%)
 Frame = +1

Query: 97   MMKDKDDELALFLEMRKREKERNNLLLHNSDEFETPLGSKPGSSPIFKIVQSAPIRKTPT 276
            +MK+KD+EL LFLEMR+REKE+N+ LL  S +   P GSKP  SPI KIV S P+RKT  
Sbjct: 2    VMKEKDEELLLFLEMRRREKEKNDSLLLESPD--APFGSKPDVSPISKIVSSMPVRKTGP 59

Query: 277  DDFLNSENDKNDYDWLLTPPGTPLFPSLEMDSQKTVMSQIGTPNARPTALKSRLANSHTE 456
            D+FL+SEND+ DYDWLLTPPGTPLFPSLEM+SQKTVM+QI   NARP  LKSRL N   +
Sbjct: 60   DEFLDSENDRTDYDWLLTPPGTPLFPSLEMESQKTVMNQIEVSNARPATLKSRLPNLQPQ 119

Query: 457  PTSRSNFVSRQPTLSPGL-YXXXXXXXXXXXXXXXXXXXXPATPTGRPALXXXXXXXXXX 633
            P SRSN  +RQP +S GL                      PATPTGRP L          
Sbjct: 120  PASRSNDAARQPAMSSGLNSSHTGNRRPLSSGGPKSTASRPATPTGRPTLPATSKSSRPS 179

Query: 634  XXXXXXXXXXXKPVAPPAXXXXXXXXXXXXXXXXLQASKPTITTAKSTIPASKSIIXXXX 813
                       K  APP                 +++S PT +TA+S+ P ++  +    
Sbjct: 180  TPTSRATLPSTKLTAPP-----------------VRSSTPTRSTARSSTPTTRPSVTASK 222

Query: 814  XXXXXXXXXXXXXXXXXVS--NLSAPPGRSSSVTRSGLSTTMKNPVPSRGSSPTVKSRPW 987
                              S    SAPP RSSSV +SG  T    PVPSRGSSP VKSRP 
Sbjct: 223  STSRSATPSRRSSTPTPSSATRASAPPARSSSVAKSG-PTAAAPPVPSRGSSPIVKSRPQ 281

Query: 988  KPSEMPGFSLDAPPNLRTSMPDRPVSASRGRPGAPSARSSSVEPGPTGRPRRQSCSPSRG 1167
            KPSE PGFSLDAPPNL+TSMP+RP SASRGR GA S RS+S E G   R RRQSCSPSRG
Sbjct: 282  KPSEKPGFSLDAPPNLKTSMPERPASASRGRAGAASGRSTSTEAGSDARLRRQSCSPSRG 341

Query: 1168 R 1170
            R
Sbjct: 342  R 342


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