BLASTX nr result

ID: Coptis23_contig00007896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007896
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526841.1| dihydrolipoamide acetyltransferase component...   390   e-106
ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acety...   388   e-106
ref|XP_002325998.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_002327232.1| predicted protein [Populus trichocarpa] gi|2...   385   e-105
emb|CBI18178.3| unnamed protein product [Vitis vinifera]              385   e-105

>ref|XP_002526841.1| dihydrolipoamide acetyltransferase component of pyruvate
           dehydrogenase, putative [Ricinus communis]
           gi|223533845|gb|EEF35576.1| dihydrolipoamide
           acetyltransferase component of pyruvate dehydrogenase,
           putative [Ricinus communis]
          Length = 473

 Score =  390 bits (1001), Expect = e-106
 Identities = 198/227 (87%), Positives = 209/227 (92%)
 Frame = +2

Query: 2   AVNVELRSAVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXX 181
           +  VEL   VPFTTMQGAVSRNMVESL+VPTFRVGYTITTDALD+LYKKIKSKGVTM+  
Sbjct: 246 SAGVELGKVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTAL 305

Query: 182 XXXXXXXXXVKHPVVNSSCRDGSSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYTLS 361
                    VKHPVVNSSCRDG+SFTYNSSINIAVAVAIDGGLITPVLQDADKVDIY+LS
Sbjct: 306 LAKATALALVKHPVVNSSCRDGNSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYSLS 365

Query: 362 RKWKELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSLV 541
           RKWKELVDKARAKQLQPHEY+TGTFTLSNLGMFGVDRFDAILPPGTGAIMAV ASQP++V
Sbjct: 366 RKWKELVDKARAKQLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVSASQPTVV 425

Query: 542 GTKDGRIGLKSLMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 682
           GTKDGRIG+K+ MQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT
Sbjct: 426 GTKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 472


>ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex, mitochondrial-like
           isoform 1 [Vitis vinifera]
          Length = 477

 Score =  388 bits (997), Expect = e-106
 Identities = 196/227 (86%), Positives = 209/227 (92%)
 Frame = +2

Query: 2   AVNVELRSAVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXX 181
           +  +EL + VPFTTMQGAVSRNMV+SL+VPTFRVGYTITTDALD+LYKKIKSKGVTM+  
Sbjct: 250 STGIELGTVVPFTTMQGAVSRNMVDSLTVPTFRVGYTITTDALDALYKKIKSKGVTMTAL 309

Query: 182 XXXXXXXXXVKHPVVNSSCRDGSSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYTLS 361
                    VKHPVVNSSCRDG SFTYNSSINIAVAVAIDGGLITPVLQDADKVDIY+LS
Sbjct: 310 LAKATALALVKHPVVNSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYSLS 369

Query: 362 RKWKELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSLV 541
           RKWKELVDKARAKQLQPHEY+TGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGAS+P++V
Sbjct: 370 RKWKELVDKARAKQLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVV 429

Query: 542 GTKDGRIGLKSLMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 682
            TKDGRIG+KS MQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT
Sbjct: 430 ATKDGRIGMKSQMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 476


>ref|XP_002325998.1| predicted protein [Populus trichocarpa] gi|222862873|gb|EEF00380.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  387 bits (993), Expect = e-105
 Identities = 194/224 (86%), Positives = 209/224 (93%)
 Frame = +2

Query: 11  VELRSAVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXX 190
           +EL S VPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALD+LYKKIKSKGVTM+     
Sbjct: 247 IELGSVVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAK 306

Query: 191 XXXXXXVKHPVVNSSCRDGSSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYTLSRKW 370
                 VKHP++NSSCRDG+SFTYNSS+NIAVAVA+DGGLITPVLQDADKVDIY+LSRKW
Sbjct: 307 ATALALVKHPLINSSCRDGNSFTYNSSVNIAVAVAMDGGLITPVLQDADKVDIYSLSRKW 366

Query: 371 KELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSLVGTK 550
           KELVDKARAKQLQP EY+TGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQP++VGTK
Sbjct: 367 KELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPTVVGTK 426

Query: 551 DGRIGLKSLMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 682
           DGRIG+K+ MQVNVTADHRVIYGADLA+FLQTLAKIIEDPKDLT
Sbjct: 427 DGRIGMKNQMQVNVTADHRVIYGADLAAFLQTLAKIIEDPKDLT 470


>ref|XP_002327232.1| predicted protein [Populus trichocarpa] gi|222835602|gb|EEE74037.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  385 bits (990), Expect = e-105
 Identities = 194/224 (86%), Positives = 208/224 (92%)
 Frame = +2

Query: 11  VELRSAVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXX 190
           +EL S VPFTTMQGAV RNMVESLSVPTFRVGYTITTDALD+LYKK+KSKGVTM+     
Sbjct: 190 IELGSVVPFTTMQGAVCRNMVESLSVPTFRVGYTITTDALDALYKKVKSKGVTMTALLAK 249

Query: 191 XXXXXXVKHPVVNSSCRDGSSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYTLSRKW 370
                 VKHPV+NSSCRDG+SFTYNSSINIAVAVAIDGGLITPVLQDADKVDIY+LSRKW
Sbjct: 250 ATALALVKHPVINSSCRDGNSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYSLSRKW 309

Query: 371 KELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSLVGTK 550
           KELVDKARAKQLQP EY+TGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQP++VGTK
Sbjct: 310 KELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPTVVGTK 369

Query: 551 DGRIGLKSLMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 682
           DGRIG+K+ MQVNVTADHRVIYGADLA+FL+TLAKIIEDPKDLT
Sbjct: 370 DGRIGMKNQMQVNVTADHRVIYGADLAAFLRTLAKIIEDPKDLT 413


>emb|CBI18178.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  385 bits (988), Expect = e-105
 Identities = 195/222 (87%), Positives = 206/222 (92%)
 Frame = +2

Query: 17  LRSAVPFTTMQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXX 196
           L + VPFTTMQGAVSRNMV+SL+VPTFRVGYTITTDALD+LYKKIKSKGVTM+       
Sbjct: 126 LGTVVPFTTMQGAVSRNMVDSLTVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKAT 185

Query: 197 XXXXVKHPVVNSSCRDGSSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYTLSRKWKE 376
               VKHPVVNSSCRDG SFTYNSSINIAVAVAIDGGLITPVLQDADKVDIY+LSRKWKE
Sbjct: 186 ALALVKHPVVNSSCRDGKSFTYNSSINIAVAVAIDGGLITPVLQDADKVDIYSLSRKWKE 245

Query: 377 LVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASQPSLVGTKDG 556
           LVDKARAKQLQPHEY+TGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGAS+P++V TKDG
Sbjct: 246 LVDKARAKQLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVATKDG 305

Query: 557 RIGLKSLMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 682
           RIG+KS MQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT
Sbjct: 306 RIGMKSQMQVNVTADHRVIYGADLASFLQTLAKIIEDPKDLT 347


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