BLASTX nr result

ID: Coptis23_contig00007886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007886
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512899.1| Actin, putative [Ricinus communis] gi|223547...   289   2e-76
ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vi...   285   2e-75
ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|2...   285   4e-75
ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cuc...   284   6e-75
ref|XP_003553955.1| PREDICTED: actin-related protein 2-like [Gly...   280   1e-73

>ref|XP_002512899.1| Actin, putative [Ricinus communis] gi|223547910|gb|EEF49402.1|
           Actin, putative [Ricinus communis]
          Length = 387

 Score =  289 bits (739), Expect = 2e-76
 Identities = 134/140 (95%), Positives = 138/140 (98%)
 Frame = -1

Query: 420 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQELKDIVVGEACADLRHQLD 241
           VCDNGTGYVKCGFAGENFPTSVFPCVVGRP+LRYEESLME++LKD VVGEACADLRHQLD
Sbjct: 8   VCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLMEEQLKDAVVGEACADLRHQLD 67

Query: 240 ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPAECKILLTDPPLNPSKNREKMVETMFEK 61
           ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDP ECKILLTDPPLNPSKNREKMVETMFEK
Sbjct: 68  ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPTECKILLTDPPLNPSKNREKMVETMFEK 127

Query: 60  YNFSGVFIQIQAVLTLYAQG 1
           YNF+GVFIQIQAVLTLYAQG
Sbjct: 128 YNFAGVFIQIQAVLTLYAQG 147


>ref|XP_002272485.1| PREDICTED: actin-related protein 2 [Vitis vinifera]
           gi|296082315|emb|CBI21320.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  285 bits (730), Expect = 2e-75
 Identities = 131/140 (93%), Positives = 137/140 (97%)
 Frame = -1

Query: 420 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQELKDIVVGEACADLRHQLD 241
           VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQ+LKDI+VGE CA+LRHQLD
Sbjct: 8   VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQLKDIIVGEGCAELRHQLD 67

Query: 240 ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPAECKILLTDPPLNPSKNREKMVETMFEK 61
           ISYPVNNGIVQNWDDMGH+WDHAFF ELKIDP ECKILLTDPPLNPSKNRE+MVETMFEK
Sbjct: 68  ISYPVNNGIVQNWDDMGHIWDHAFFKELKIDPTECKILLTDPPLNPSKNRERMVETMFEK 127

Query: 60  YNFSGVFIQIQAVLTLYAQG 1
           YNF+GVFIQIQAVLTLYAQG
Sbjct: 128 YNFAGVFIQIQAVLTLYAQG 147


>ref|XP_002298643.1| predicted protein [Populus trichocarpa] gi|222845901|gb|EEE83448.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  285 bits (728), Expect = 4e-75
 Identities = 132/140 (94%), Positives = 137/140 (97%)
 Frame = -1

Query: 420 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQELKDIVVGEACADLRHQLD 241
           VCDNGTGYVKCGFAGENFPTSVFPCVVGRP+LRYEESLME +LKDIVVGEACA LRHQLD
Sbjct: 8   VCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLMEHQLKDIVVGEACAGLRHQLD 67

Query: 240 ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPAECKILLTDPPLNPSKNREKMVETMFEK 61
           ISYPVNNGIVQNWDDMGHVWDHAF+N+LKIDP ECKILLTDPPLNPSKNREKMVETMFEK
Sbjct: 68  ISYPVNNGIVQNWDDMGHVWDHAFYNQLKIDPMECKILLTDPPLNPSKNREKMVETMFEK 127

Query: 60  YNFSGVFIQIQAVLTLYAQG 1
           YNF+GVFIQIQAVLTLYAQG
Sbjct: 128 YNFAGVFIQIQAVLTLYAQG 147


>ref|XP_004138627.1| PREDICTED: actin-related protein 2-like [Cucumis sativus]
          Length = 389

 Score =  284 bits (726), Expect = 6e-75
 Identities = 132/140 (94%), Positives = 138/140 (98%)
 Frame = -1

Query: 420 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQELKDIVVGEACADLRHQLD 241
           VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESL+EQELKDIVVGE+CADLRHQLD
Sbjct: 8   VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLIEQELKDIVVGESCADLRHQLD 67

Query: 240 ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPAECKILLTDPPLNPSKNREKMVETMFEK 61
           I+YPV+NGIVQNWDDM HVWDHAFFNELK+DP +CKILLTDPPLNPSKNREKMVETMFEK
Sbjct: 68  ITYPVHNGIVQNWDDMCHVWDHAFFNELKVDPKQCKILLTDPPLNPSKNREKMVETMFEK 127

Query: 60  YNFSGVFIQIQAVLTLYAQG 1
           YNFSGVFIQIQAVLTLYAQG
Sbjct: 128 YNFSGVFIQIQAVLTLYAQG 147


>ref|XP_003553955.1| PREDICTED: actin-related protein 2-like [Glycine max]
          Length = 389

 Score =  280 bits (715), Expect = 1e-73
 Identities = 130/140 (92%), Positives = 135/140 (96%)
 Frame = -1

Query: 420 VCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQELKDIVVGEACADLRHQLD 241
           VCDNGTGYVKCGFAGENFPTSVFPCVVGRP+LRYEESL EQ LKDIVVGE CADLRHQLD
Sbjct: 8   VCDNGTGYVKCGFAGENFPTSVFPCVVGRPMLRYEESLTEQALKDIVVGEGCADLRHQLD 67

Query: 240 ISYPVNNGIVQNWDDMGHVWDHAFFNELKIDPAECKILLTDPPLNPSKNREKMVETMFEK 61
           ISYPVNNGIVQNWDDM HVWDHAFFNELK++P +CKILLTDPPLNPSKNREKMVETMFEK
Sbjct: 68  ISYPVNNGIVQNWDDMCHVWDHAFFNELKVNPPDCKILLTDPPLNPSKNREKMVETMFEK 127

Query: 60  YNFSGVFIQIQAVLTLYAQG 1
           YNF+GVFIQIQAVLTLYAQG
Sbjct: 128 YNFAGVFIQIQAVLTLYAQG 147


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