BLASTX nr result

ID: Coptis23_contig00007880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007880
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU52583.1| copper/zinc superoxide dismutase [Lantana camara]      114   6e-24
gb|AFN42318.1| Cu,Zn superoxide dismutase C95A [synthetic constr...   114   8e-24
gb|AFC35181.1| copper/zinc-superoxide dismutase, partial [Populu...   114   8e-24
gb|ABK93317.1| unknown [Populus trichocarpa]                          114   8e-24
ref|XP_002328388.1| predicted protein [Populus trichocarpa] gi|1...   114   8e-24

>gb|ACU52583.1| copper/zinc superoxide dismutase [Lantana camara]
          Length = 152

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = +1

Query: 1   GVAEFTIIDKQISLTGPYSIIGRAVVVHADPDDLGKGGHELSKVTGNAGGRVACGVIGLQ 180
           G A FTI+DKQI LTGP+SI+GRAVVVHADPDDLGKGGHELSK TGNAGGRVACG+IGLQ
Sbjct: 92  GKASFTIVDKQIPLTGPHSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

Query: 181 G 183
           G
Sbjct: 152 G 152


>gb|AFN42318.1| Cu,Zn superoxide dismutase C95A [synthetic construct]
          Length = 152

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = +1

Query: 1   GVAEFTIIDKQISLTGPYSIIGRAVVVHADPDDLGKGGHELSKVTGNAGGRVACGVIGLQ 180
           G A FTI+DKQI LTGP+SIIGRAVVVHADPDDLGKGGHELSK TGNAGGR+ACG+IGLQ
Sbjct: 92  GTAAFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQ 151

Query: 181 G 183
           G
Sbjct: 152 G 152


>gb|AFC35181.1| copper/zinc-superoxide dismutase, partial [Populus x canadensis]
          Length = 143

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +1

Query: 1   GVAEFTIIDKQISLTGPYSIIGRAVVVHADPDDLGKGGHELSKVTGNAGGRVACGVIGLQ 180
           G A FTIIDKQI LTGP+SIIGRAVVVH DPDDLGKGGHELSK TGNAGGRVACG+IGLQ
Sbjct: 83  GTATFTIIDKQIPLTGPHSIIGRAVVVHGDPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 142

Query: 181 G 183
           G
Sbjct: 143 G 143


>gb|ABK93317.1| unknown [Populus trichocarpa]
          Length = 152

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +1

Query: 1   GVAEFTIIDKQISLTGPYSIIGRAVVVHADPDDLGKGGHELSKVTGNAGGRVACGVIGLQ 180
           G A FTIIDKQI LTGP+SIIGRAVVVH DPDDLGKGGHELSK TGNAGGRVACG+IGLQ
Sbjct: 92  GTATFTIIDKQIPLTGPHSIIGRAVVVHGDPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

Query: 181 G 183
           G
Sbjct: 152 G 152


>ref|XP_002328388.1| predicted protein [Populus trichocarpa] gi|118482058|gb|ABK92960.1|
           unknown [Populus trichocarpa]
           gi|118484653|gb|ABK94197.1| unknown [Populus
           trichocarpa] gi|125863282|gb|ABN58428.1| Cu-Zn
           superoxide dismutase [Populus trichocarpa]
           gi|222838103|gb|EEE76468.1| predicted protein [Populus
           trichocarpa]
          Length = 152

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/61 (88%), Positives = 56/61 (91%)
 Frame = +1

Query: 1   GVAEFTIIDKQISLTGPYSIIGRAVVVHADPDDLGKGGHELSKVTGNAGGRVACGVIGLQ 180
           G A FTIIDKQI LTGP+SIIGRAVVVH DPDDLGKGGHELSK TGNAGGRVACG+IGLQ
Sbjct: 92  GTATFTIIDKQIPLTGPHSIIGRAVVVHGDPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 151

Query: 181 G 183
           G
Sbjct: 152 G 152


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