BLASTX nr result
ID: Coptis23_contig00007867
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00007867 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309781.1| predicted protein [Populus trichocarpa] gi|2... 48 1e-09 ref|XP_002533840.1| conserved hypothetical protein [Ricinus comm... 44 3e-09 ref|XP_002272151.2| PREDICTED: uncharacterized protein LOC100242... 42 1e-07 >ref|XP_002309781.1| predicted protein [Populus trichocarpa] gi|222852684|gb|EEE90231.1| predicted protein [Populus trichocarpa] Length = 380 Score = 47.8 bits (112), Expect(2) = 1e-09 Identities = 20/30 (66%), Positives = 27/30 (90%) Frame = -2 Query: 91 EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2 EDV RY SFS ML+A++LE+VLPG+KT+E+ Sbjct: 176 EDVRRYASFSKMLQAENLEKVLPGVKTVEE 205 Score = 39.7 bits (91), Expect(2) = 1e-09 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 23/88 (26%) Frame = -3 Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKG----------KCEC------ 133 + + SG RT +V + DS L+++++ W++LI +KG CE Sbjct: 77 YRSVKSGAVCRTYEKMVFGDKDSNLKQKEENWDQLIKEKGLELINVLEGISCEIHVQEPY 136 Query: 132 -------V*TIEGRCAVGDYERMLKGIL 70 TIEGRCA GDY R+ G L Sbjct: 137 FSLLKDGRKTIEGRCATGDYIRIEPGDL 164 >ref|XP_002533840.1| conserved hypothetical protein [Ricinus communis] gi|223526219|gb|EEF28542.1| conserved hypothetical protein [Ricinus communis] Length = 370 Score = 44.3 bits (103), Expect(2) = 3e-09 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = -2 Query: 91 EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2 +DV RY SF MLEA+SL +VLPG+KTIE+ Sbjct: 174 KDVRRYPSFLKMLEAESLSKVLPGVKTIEE 203 Score = 41.6 bits (96), Expect(2) = 3e-09 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 23/88 (26%) Frame = -3 Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKGK------------------- 142 + CI S +F +T + + D+ L+++++ WNKLIL+KG Sbjct: 75 YQCIISRSFCKTYDTIEFINEDNSLKQKEEQWNKLILEKGSELMNVLMATFHELHVQEPF 134 Query: 141 ----CECV*TIEGRCAVGDYERMLKGIL 70 + + TIEGRCA +Y R+ G L Sbjct: 135 FSLLKDGLKTIEGRCADDNYSRIEPGAL 162 >ref|XP_002272151.2| PREDICTED: uncharacterized protein LOC100242314 [Vitis vinifera] gi|296081341|emb|CBI17687.3| unnamed protein product [Vitis vinifera] Length = 398 Score = 42.4 bits (98), Expect(2) = 1e-07 Identities = 18/30 (60%), Positives = 24/30 (80%) Frame = -2 Query: 91 EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2 +DV RY SFS +LE++ L VLPG+KTIE+ Sbjct: 185 QDVRRYASFSQLLESEGLAEVLPGVKTIEE 214 Score = 38.5 bits (88), Expect(2) = 1e-07 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 23/88 (26%) Frame = -3 Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKGK------------------- 142 + I SG F + + DS L+++++ WNKL++DKG Sbjct: 87 YRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKGLELVNILKTIDFELHVQEPF 145 Query: 141 ----CECV*TIEGRCAVGDYERMLKGIL 70 + + IEGRCAVGDY R+ G L Sbjct: 146 FSQLKDGLKIIEGRCAVGDYNRIGSGAL 173