BLASTX nr result

ID: Coptis23_contig00007867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007867
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309781.1| predicted protein [Populus trichocarpa] gi|2...    48   1e-09
ref|XP_002533840.1| conserved hypothetical protein [Ricinus comm...    44   3e-09
ref|XP_002272151.2| PREDICTED: uncharacterized protein LOC100242...    42   1e-07

>ref|XP_002309781.1| predicted protein [Populus trichocarpa] gi|222852684|gb|EEE90231.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 47.8 bits (112), Expect(2) = 1e-09
 Identities = 20/30 (66%), Positives = 27/30 (90%)
 Frame = -2

Query: 91  EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2
           EDV RY SFS ML+A++LE+VLPG+KT+E+
Sbjct: 176 EDVRRYASFSKMLQAENLEKVLPGVKTVEE 205



 Score = 39.7 bits (91), Expect(2) = 1e-09
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 23/88 (26%)
 Frame = -3

Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKG----------KCEC------ 133
           +  + SG   RT   +V  + DS L+++++ W++LI +KG           CE       
Sbjct: 77  YRSVKSGAVCRTYEKMVFGDKDSNLKQKEENWDQLIKEKGLELINVLEGISCEIHVQEPY 136

Query: 132 -------V*TIEGRCAVGDYERMLKGIL 70
                    TIEGRCA GDY R+  G L
Sbjct: 137 FSLLKDGRKTIEGRCATGDYIRIEPGDL 164


>ref|XP_002533840.1| conserved hypothetical protein [Ricinus communis]
           gi|223526219|gb|EEF28542.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 370

 Score = 44.3 bits (103), Expect(2) = 3e-09
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -2

Query: 91  EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2
           +DV RY SF  MLEA+SL +VLPG+KTIE+
Sbjct: 174 KDVRRYPSFLKMLEAESLSKVLPGVKTIEE 203



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 23/88 (26%)
 Frame = -3

Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKGK------------------- 142
           + CI S +F +T + +     D+ L+++++ WNKLIL+KG                    
Sbjct: 75  YQCIISRSFCKTYDTIEFINEDNSLKQKEEQWNKLILEKGSELMNVLMATFHELHVQEPF 134

Query: 141 ----CECV*TIEGRCAVGDYERMLKGIL 70
                + + TIEGRCA  +Y R+  G L
Sbjct: 135 FSLLKDGLKTIEGRCADDNYSRIEPGAL 162


>ref|XP_002272151.2| PREDICTED: uncharacterized protein LOC100242314 [Vitis vinifera]
           gi|296081341|emb|CBI17687.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 42.4 bits (98), Expect(2) = 1e-07
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -2

Query: 91  EDVERYTSFSAMLEAKSLERVLPGIKTIEQ 2
           +DV RY SFS +LE++ L  VLPG+KTIE+
Sbjct: 185 QDVRRYASFSQLLESEGLAEVLPGVKTIEE 214



 Score = 38.5 bits (88), Expect(2) = 1e-07
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 23/88 (26%)
 Frame = -3

Query: 264 HHCISSGTFVRTSNVVVPFEGDSLLEERKDGWNKLILDKGK------------------- 142
           +  I SG F    + +     DS L+++++ WNKL++DKG                    
Sbjct: 87  YRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKGLELVNILKTIDFELHVQEPF 145

Query: 141 ----CECV*TIEGRCAVGDYERMLKGIL 70
                + +  IEGRCAVGDY R+  G L
Sbjct: 146 FSQLKDGLKIIEGRCAVGDYNRIGSGAL 173


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