BLASTX nr result

ID: Coptis23_contig00007854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007854
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211...   173   2e-41
ref|XP_002531404.1| conserved hypothetical protein [Ricinus comm...   170   2e-40
ref|XP_003628665.1| LSM12-like protein [Medicago truncatula] gi|...   169   5e-40
ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499...   167   2e-39
emb|CBI32087.3| unnamed protein product [Vitis vinifera]              166   3e-39

>ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211481 [Cucumis sativus]
           gi|449478540|ref|XP_004155346.1| PREDICTED:
           uncharacterized LOC101211481 [Cucumis sativus]
          Length = 181

 Score =  173 bits (439), Expect = 2e-41
 Identities = 88/129 (68%), Positives = 102/129 (79%)
 Frame = -1

Query: 602 PRRNIRLVKVNYIKEFAVLGQGEDPLNLDECFVDLKQLXXXXXXXXXXXXXXXXXIGVGV 423
           PRRNIRL+K NYIKEF+ LG GEDPL+L  C++DL  L                 IGVGV
Sbjct: 52  PRRNIRLLKANYIKEFSFLGHGEDPLDLKNCYLDLNTLRAREELAIRQAEAEAERIGVGV 111

Query: 422 TSEAQNIFDALAKTLPVRWDRTVIVVMNEVRVSSPYHPENVTGGTPAANERVKKVVDFER 243
           TSEAQ+IFDAL+KTLPVRWD+TVIVVMNEVRVSSPY PE+V+GGTPAANERVKKV+++ER
Sbjct: 112 TSEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEWER 171

Query: 242 KRLRYRGPG 216
           KRL+ RG G
Sbjct: 172 KRLQVRGGG 180


>ref|XP_002531404.1| conserved hypothetical protein [Ricinus communis]
           gi|223528997|gb|EEF30988.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 177

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/129 (65%), Positives = 101/129 (78%)
 Frame = -1

Query: 602 PRRNIRLVKVNYIKEFAVLGQGEDPLNLDECFVDLKQLXXXXXXXXXXXXXXXXXIGVGV 423
           PRRNIR +K NYIKEF+ LGQ EDPL++ +C++DL  L                 +GVGV
Sbjct: 48  PRRNIRFLKANYIKEFSFLGQAEDPLDVKKCYIDLHSLQAREELALRQAEAEAERLGVGV 107

Query: 422 TSEAQNIFDALAKTLPVRWDRTVIVVMNEVRVSSPYHPENVTGGTPAANERVKKVVDFER 243
           T+EAQNIFDAL+KTLPVRWD+TVIVVMNEVRV++PY PE V+GGTPAANERVKKV++FER
Sbjct: 108 TAEAQNIFDALSKTLPVRWDKTVIVVMNEVRVNNPYLPECVSGGTPAANERVKKVLEFER 167

Query: 242 KRLRYRGPG 216
           KRL+ RG G
Sbjct: 168 KRLQARGTG 176


>ref|XP_003628665.1| LSM12-like protein [Medicago truncatula]
           gi|355522687|gb|AET03141.1| LSM12-like protein [Medicago
           truncatula] gi|388519341|gb|AFK47732.1| unknown
           [Medicago truncatula]
          Length = 188

 Score =  169 bits (427), Expect = 5e-40
 Identities = 85/129 (65%), Positives = 99/129 (76%)
 Frame = -1

Query: 602 PRRNIRLVKVNYIKEFAVLGQGEDPLNLDECFVDLKQLXXXXXXXXXXXXXXXXXIGVGV 423
           PRRNIRL+K +YIK+F  LGQG+DPL+ + C +D+  L                 IGVGV
Sbjct: 58  PRRNIRLLKADYIKDFTFLGQGQDPLDPNHCLLDINALQSREELAIRQAEADAERIGVGV 117

Query: 422 TSEAQNIFDALAKTLPVRWDRTVIVVMNEVRVSSPYHPENVTGGTPAANERVKKVVDFER 243
           TSEAQNIFDAL+KTLPVRWD+TVIVVMNEVRVSSPYH E V GGTPAAN+RVKKV++FER
Sbjct: 118 TSEAQNIFDALSKTLPVRWDKTVIVVMNEVRVSSPYHSECVIGGTPAANDRVKKVLEFER 177

Query: 242 KRLRYRGPG 216
           KRL+ RG G
Sbjct: 178 KRLQLRGSG 186


>ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499950 [Glycine max]
          Length = 186

 Score =  167 bits (422), Expect = 2e-39
 Identities = 84/132 (63%), Positives = 100/132 (75%)
 Frame = -1

Query: 611 KLTPRRNIRLVKVNYIKEFAVLGQGEDPLNLDECFVDLKQLXXXXXXXXXXXXXXXXXIG 432
           K +PRRN+RL+K NYIK+F  LG  +DPL+ + CF+DL  L                 IG
Sbjct: 53  KPSPRRNLRLLKANYIKDFTFLGHAQDPLDPNTCFLDLTALQQREDVAVRQAEADAERIG 112

Query: 431 VGVTSEAQNIFDALAKTLPVRWDRTVIVVMNEVRVSSPYHPENVTGGTPAANERVKKVVD 252
           VGVTSEAQ+IFDAL+KTLPVRWD+TVIVVMNEVRVSSPYH E+V GGTPAAN+RVKKV++
Sbjct: 113 VGVTSEAQSIFDALSKTLPVRWDKTVIVVMNEVRVSSPYHSESVVGGTPAANDRVKKVLE 172

Query: 251 FERKRLRYRGPG 216
           FERKRL+ R  G
Sbjct: 173 FERKRLQLRSSG 184


>emb|CBI32087.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  166 bits (420), Expect = 3e-39
 Identities = 86/129 (66%), Positives = 98/129 (75%)
 Frame = -1

Query: 602 PRRNIRLVKVNYIKEFAVLGQGEDPLNLDECFVDLKQLXXXXXXXXXXXXXXXXXIGVGV 423
           PRRNIRL+K NYIKEF+ LGQ EDPL+  +C +DL  L                 IGVGV
Sbjct: 38  PRRNIRLLKANYIKEFSYLGQAEDPLDPKKCCIDLNALQAREEVAIRQAEADAERIGVGV 97

Query: 422 TSEAQNIFDALAKTLPVRWDRTVIVVMNEVRVSSPYHPENVTGGTPAANERVKKVVDFER 243
           T EAQNIFDAL+KTLPVRWD+T IVVMNEVRVSSPY PE+V+GGTPAANERVKKV++FER
Sbjct: 98  TVEAQNIFDALSKTLPVRWDKTAIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEFER 157

Query: 242 KRLRYRGPG 216
           KRL+ R  G
Sbjct: 158 KRLQARVAG 166


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