BLASTX nr result

ID: Coptis23_contig00007845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007845
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38567.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   193   1e-47
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   181   6e-44
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   181   6e-44
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/172 (55%), Positives = 132/172 (76%)
 Frame = -3

Query: 533 WSWVYEVDKKIEDQAANLEKWKERIPTCELRIKGQLDLVEELKGRLLKKKAQISSMMEKT 354
           WSWVY+VD+++++Q+A +EK K+RIPTC+ RI  QL  +EEL+  L KKK QI+ MMEKT
Sbjct: 222 WSWVYDVDRQLQEQSAKIEKLKDRIPTCQARIDRQLGKMEELRECLTKKKTQIACMMEKT 281

Query: 353 SEVRRLKEELHQNLSMATKERLELEEEHSHQKNLIEKLVKRFSSLEKQVTDIQEQDFKST 174
           +EVRR+KE+L Q LS+ATKERLELEEEH  + N I+K+V     L++QV ++ EQD K+T
Sbjct: 282 TEVRRMKEDLQQRLSLATKERLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNT 341

Query: 173 QAEECQMEEELKGLQDVVDSANIFLTKMKEEESALWENLSDARNTIESISAE 18
           QAEE +++E LKGLQD +D+ N+ L+++KEEESAL  +LS   + I  IS E
Sbjct: 342 QAEESEIKEMLKGLQDELDTTNLILSRLKEEESALSASLSIKMDEIRKISDE 393


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/172 (55%), Positives = 132/172 (76%)
 Frame = -3

Query: 533 WSWVYEVDKKIEDQAANLEKWKERIPTCELRIKGQLDLVEELKGRLLKKKAQISSMMEKT 354
           WSWVY+VD+++++Q+A +EK K+RIPTC+ RI  QL  +EEL+  L KKK QI+ MMEKT
Sbjct: 252 WSWVYDVDRQLQEQSAKIEKLKDRIPTCQARIDRQLGKMEELRECLTKKKTQIACMMEKT 311

Query: 353 SEVRRLKEELHQNLSMATKERLELEEEHSHQKNLIEKLVKRFSSLEKQVTDIQEQDFKST 174
           +EVRR+KE+L Q LS+ATKERLELEEEH  + N I+K+V     L++QV ++ EQD K+T
Sbjct: 312 TEVRRMKEDLQQRLSLATKERLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNT 371

Query: 173 QAEECQMEEELKGLQDVVDSANIFLTKMKEEESALWENLSDARNTIESISAE 18
           QAEE +++E LKGLQD +D+ N+ L+++KEEESAL  +LS   + I  IS E
Sbjct: 372 QAEESEIKEMLKGLQDELDTTNLILSRLKEEESALSASLSIKMDEIRKISDE 423


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/172 (51%), Positives = 128/172 (74%)
 Frame = -3

Query: 533 WSWVYEVDKKIEDQAANLEKWKERIPTCELRIKGQLDLVEELKGRLLKKKAQISSMMEKT 354
           WSWVY+VDK++++Q+A + K ++RIP C  +I  QL LVE+L+ R ++KK QI+SMME+T
Sbjct: 246 WSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMERT 305

Query: 353 SEVRRLKEELHQNLSMATKERLELEEEHSHQKNLIEKLVKRFSSLEKQVTDIQEQDFKST 174
           SEVRR+K+EL + L+ AT+E+L LEEEH  + N I+KL KR   LE+QV DI EQ  K+T
Sbjct: 306 SEVRRMKDELQETLTSATREKLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNT 365

Query: 173 QAEECQMEEELKGLQDVVDSANIFLTKMKEEESALWENLSDARNTIESISAE 18
           QAEE ++EE+LK L+   ++A   + ++KEEE+AL E+L   RN I+ I+ E
Sbjct: 366 QAEESEIEEKLKELESETEAAKSTVMRLKEEENALMESLYSGRNEIKKIAEE 417


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/172 (51%), Positives = 128/172 (74%)
 Frame = -3

Query: 533 WSWVYEVDKKIEDQAANLEKWKERIPTCELRIKGQLDLVEELKGRLLKKKAQISSMMEKT 354
           WSWVY+VDK++++Q+A + K ++RIP C  +I  QL LVE+L+ R ++KK QI+SMME+T
Sbjct: 246 WSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMERT 305

Query: 353 SEVRRLKEELHQNLSMATKERLELEEEHSHQKNLIEKLVKRFSSLEKQVTDIQEQDFKST 174
           SEVRR+K+EL + L+ AT+E+L LEEEH  + N I+KL KR   LE+QV DI EQ  K+T
Sbjct: 306 SEVRRMKDELQETLTSATREKLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNT 365

Query: 173 QAEECQMEEELKGLQDVVDSANIFLTKMKEEESALWENLSDARNTIESISAE 18
           QAEE ++EE+LK L+   ++A   + ++KEEE+AL E+L   RN I+ I+ E
Sbjct: 366 QAEESEIEEKLKELESETEAAKSTVMRLKEEENALMESLYSGRNEIKKIAEE 417


>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  157 bits (396), Expect = 1e-36
 Identities = 81/172 (47%), Positives = 114/172 (66%)
 Frame = -3

Query: 533 WSWVYEVDKKIEDQAANLEKWKERIPTCELRIKGQLDLVEELKGRLLKKKAQISSMMEKT 354
           WSWVY VDK++++Q   L K KERIPTC+ RI  +L  VEEL+   ++KKAQ + M+E+ 
Sbjct: 253 WSWVYSVDKELQEQMVKLGKLKERIPTCQARIDHELMKVEELRKTFIEKKAQTAHMVERA 312

Query: 353 SEVRRLKEELHQNLSMATKERLELEEEHSHQKNLIEKLVKRFSSLEKQVTDIQEQDFKST 174
            E              ATK++LELE EH+ + N I  +VKR   LE+Q  DI EQ  K+T
Sbjct: 313 KE--------------ATKKKLELENEHNRRTNQIHSMVKRVKLLEQQARDIHEQQVKNT 358

Query: 173 QAEECQMEEELKGLQDVVDSANIFLTKMKEEESALWENLSDARNTIESISAE 18
           QAEEC++EE+LK LQD++D+A+  L+++KEEES L E++S   + I  I+ E
Sbjct: 359 QAEECEIEEKLKELQDMIDAADFTLSRLKEEESTLLESVSKGMDEIRKITEE 410


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