BLASTX nr result
ID: Coptis23_contig00007842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007842
(1016 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 312 9e-83
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 312 9e-83
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 312 9e-83
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 308 2e-81
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 306 7e-81
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 312 bits (799), Expect = 9e-83
Identities = 158/288 (54%), Positives = 206/288 (71%), Gaps = 1/288 (0%)
Frame = +2
Query: 2 RCLVYDGTVNATYMEWFFKKGMEKEAMDNYQGLLDRQFQMTPATCNVLLQTLLRNGKNEE 181
RCLVYDG VN T+M+W+F KG EK AMD+Y+ LLDRQF+MTP TCN LL+ LL++ K E
Sbjct: 271 RCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVLLKHDKKAE 330
Query: 182 AATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSEALTVFRQVGKEK-AKAFQMD 358
A LF MLDNH PN QAVNS++F++MVNE +LGK +EA+ VF++VGK++ +K F MD
Sbjct: 331 AWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMD 390
Query: 359 GAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRFLIEAYFKEERIDDVLQKFQ 538
AGYNN++ R CE+G+L EAE+LF E+ KS+ D N YR IEAYF ER DD LQ F
Sbjct: 391 VAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFN 450
Query: 539 MLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGEREVKPDVSTYELVINELCRDG 718
V+S ++ F + VF L KGK E L ++GE++ KPD +TYE+VI LC++
Sbjct: 451 RFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKER 510
Query: 719 KLDLARDLLGDMVRYSPHRVVRVTPTLRNSVDEAFGKEGRTDEIERVL 862
D +RDL+G MVRY+ + VTP+LR V EAFGKEGR++EIER+L
Sbjct: 511 LFDASRDLMGQMVRYN----IGVTPSLREFVVEAFGKEGRSEEIERLL 554
Score = 58.5 bits (140), Expect = 2e-06
Identities = 50/212 (23%), Positives = 86/212 (40%)
Frame = +2
Query: 122 TPATCNVLLQTLLRNGKNEEAATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSE 301
T TCN ++ + RN + ++A LFQ + + N ++N+++N + G+V
Sbjct: 134 TVFTCNAIIAAMYRNKRFDDAIALFQFFFNQ----SNIVPNIVSYNVLINTHCDAGRVDV 189
Query: 302 ALTVFRQVGKEKAKAFQMDGAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRF 481
L ++R + F Y +L L + G + EA L +EM+ K D Y
Sbjct: 190 GLDIYRHILAN--APFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNN 247
Query: 482 LIEAYFKEERIDDVLQKFQMLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGERE 661
LI + E ++ F L E + + FTKG+ D K L +R+
Sbjct: 248 LISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQ 307
Query: 662 VKPDVSTYELVINELCRDGKLDLARDLLGDMV 757
+ T ++ L + K A L M+
Sbjct: 308 FRMTPVTCNALLEVLLKHDKKAEAWALFDQML 339
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Vitis vinifera]
Length = 627
Score = 312 bits (799), Expect = 9e-83
Identities = 158/288 (54%), Positives = 206/288 (71%), Gaps = 1/288 (0%)
Frame = +2
Query: 2 RCLVYDGTVNATYMEWFFKKGMEKEAMDNYQGLLDRQFQMTPATCNVLLQTLLRNGKNEE 181
RCLVYDG VN T+M+W+F KG EK AMD+Y+ LLDRQF+MTP TCN LL+ LL++ K E
Sbjct: 271 RCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVLLKHDKKAE 330
Query: 182 AATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSEALTVFRQVGKEK-AKAFQMD 358
A LF MLDNH PN QAVNS++F++MVNE +LGK +EA+ VF++VGK++ +K F MD
Sbjct: 331 AWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMD 390
Query: 359 GAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRFLIEAYFKEERIDDVLQKFQ 538
AGYNN++ R CE+G+L EAE+LF E+ KS+ D N YR IEAYF ER DD LQ F
Sbjct: 391 VAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFN 450
Query: 539 MLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGEREVKPDVSTYELVINELCRDG 718
V+S ++ F + VF L KGK E L ++GE++ KPD +TYE+VI LC++
Sbjct: 451 RFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKER 510
Query: 719 KLDLARDLLGDMVRYSPHRVVRVTPTLRNSVDEAFGKEGRTDEIERVL 862
D +RDL+G MVRY+ + VTP+LR V EAFGKEGR++EIER+L
Sbjct: 511 LFDASRDLMGQMVRYN----IGVTPSLREFVVEAFGKEGRSEEIERLL 554
Score = 58.5 bits (140), Expect = 2e-06
Identities = 50/212 (23%), Positives = 86/212 (40%)
Frame = +2
Query: 122 TPATCNVLLQTLLRNGKNEEAATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSE 301
T TCN ++ + RN + ++A LFQ + + N ++N+++N + G+V
Sbjct: 134 TVFTCNAIIAAMYRNKRFDDAIALFQFFFNQ----SNIVPNIVSYNVLINTHCDAGRVDV 189
Query: 302 ALTVFRQVGKEKAKAFQMDGAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRF 481
L ++R + F Y +L L + G + EA L +EM+ K D Y
Sbjct: 190 GLDIYRHILAN--APFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNN 247
Query: 482 LIEAYFKEERIDDVLQKFQMLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGERE 661
LI + E ++ F L E + + FTKG+ D K L +R+
Sbjct: 248 LISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQ 307
Query: 662 VKPDVSTYELVINELCRDGKLDLARDLLGDMV 757
+ T ++ L + K A L M+
Sbjct: 308 FRMTPVTCNALLEVLLKHDKKAEAWALFDQML 339
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 312 bits (799), Expect = 9e-83
Identities = 158/288 (54%), Positives = 206/288 (71%), Gaps = 1/288 (0%)
Frame = +2
Query: 2 RCLVYDGTVNATYMEWFFKKGMEKEAMDNYQGLLDRQFQMTPATCNVLLQTLLRNGKNEE 181
RCLVYDG VN T+M+W+F KG EK AMD+Y+ LLDRQF+MTP TCN LL+ LL++ K E
Sbjct: 271 RCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQFRMTPVTCNALLEVLLKHDKKAE 330
Query: 182 AATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSEALTVFRQVGKEK-AKAFQMD 358
A LF MLDNH PN QAVNS++F++MVNE +LGK +EA+ VF++VGK++ +K F MD
Sbjct: 331 AWALFDQMLDNHTPPNFQAVNSDSFSVMVNECVKLGKFTEAIEVFKKVGKKQGSKPFAMD 390
Query: 359 GAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRFLIEAYFKEERIDDVLQKFQ 538
AGYNN++ R CE+G+L EAE+LF E+ KS+ D N YR IEAYF ER DD LQ F
Sbjct: 391 VAGYNNIIARFCENGLLSEAEQLFGELSTKSLTPDVNIYRTFIEAYFGMERADDALQMFN 450
Query: 539 MLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGEREVKPDVSTYELVINELCRDG 718
V+S ++ F + VF L KGK E L ++GE++ KPD +TYE+VI LC++
Sbjct: 451 RFVDSGLRVIVSFANKVFDELVNKGKAGECVPVLTKMGEKDPKPDPTTYEIVIKGLCKER 510
Query: 719 KLDLARDLLGDMVRYSPHRVVRVTPTLRNSVDEAFGKEGRTDEIERVL 862
D +RDL+G MVRY+ + VTP+LR V EAFGKEGR++EIER+L
Sbjct: 511 LFDASRDLMGQMVRYN----IGVTPSLREFVVEAFGKEGRSEEIERLL 554
Score = 58.5 bits (140), Expect = 2e-06
Identities = 50/212 (23%), Positives = 86/212 (40%)
Frame = +2
Query: 122 TPATCNVLLQTLLRNGKNEEAATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSE 301
T TCN ++ + RN + ++A LFQ + + N ++N+++N + G+V
Sbjct: 134 TVFTCNAIIAAMYRNKRFDDAIALFQFFFNQ----SNIVPNIVSYNVLINTHCDAGRVDV 189
Query: 302 ALTVFRQVGKEKAKAFQMDGAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRF 481
L ++R + F Y +L L + G + EA L +EM+ K D Y
Sbjct: 190 GLDIYRHILAN--APFSPSPVTYRHLTKGLIDSGRIGEAVDLLREMLNKGHGADSLVYNN 247
Query: 482 LIEAYFKEERIDDVLQKFQMLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGERE 661
LI + E ++ F L E + + FTKG+ D K L +R+
Sbjct: 248 LISGFLNLENEAKAIELFDELKERCLVYDGVVNGTFMDWYFTKGREKCAMDSYKSLLDRQ 307
Query: 662 VKPDVSTYELVINELCRDGKLDLARDLLGDMV 757
+ T ++ L + K A L M+
Sbjct: 308 FRMTPVTCNALLEVLLKHDKKAEAWALFDQML 339
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 308 bits (788), Expect = 2e-81
Identities = 160/324 (49%), Positives = 215/324 (66%), Gaps = 1/324 (0%)
Frame = +2
Query: 2 RCLVYDGTVNATYMEWFFKKGMEKEAMDNYQGLLDRQFQMTPATCNVLLQTLLRNGKNEE 181
RCLVYDG VNAT+M+WFF +G EKEAM++Y+ LLDRQF+M PATCNVLL+ LL++ K E
Sbjct: 279 RCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTE 338
Query: 182 AATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSEALTVFRQVGKE-KAKAFQMD 358
A TLF MLDNH PN QAVNS+TFNIMVNE F+LGK +EA+ FR+VG + K++ F MD
Sbjct: 339 AWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKLGKFTEAVETFRKVGTQPKSRPFAMD 398
Query: 359 GAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRFLIEAYFKEERIDDVLQKFQ 538
AGYNN++ R CE GM+ +AE F E+ KS+ D T+R LIE+Y K E+IDD L+ F
Sbjct: 399 VAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFN 458
Query: 539 MLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGEREVKPDVSTYELVINELCRDG 718
+V+ ++ F +MVFG L GK + A L ++GER+ KPD + Y++VI LC +G
Sbjct: 459 RMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEG 518
Query: 719 KLDLARDLLGDMVRYSPHRVVRVTPTLRNSVDEAFGKEGRTDEIERVLGRSFEARQANFA 898
LD +R+LL ++RY + +TPTL V +AF K GR +EIER+L + A
Sbjct: 519 ALDTSRELLDQIMRYG----IGLTPTLEEFVKDAFVKAGRHEEIERLLNMNKWGHAAYRP 574
Query: 899 RGLSSGVQQAPFESRQGTFARGPP 970
+ Q+ + G +GPP
Sbjct: 575 PSGPPRISQSQVPPQMGRPLQGPP 598
>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10270-like
[Cucumis sativus]
Length = 559
Score = 306 bits (783), Expect = 7e-81
Identities = 160/324 (49%), Positives = 214/324 (66%), Gaps = 1/324 (0%)
Frame = +2
Query: 2 RCLVYDGTVNATYMEWFFKKGMEKEAMDNYQGLLDRQFQMTPATCNVLLQTLLRNGKNEE 181
RCLVYDG VNAT+M+WFF +G EKEAM++Y+ LLDRQF+M PATCNVLL+ LL++ K E
Sbjct: 87 RCLVYDGVVNATFMDWFFNQGKEKEAMESYKSLLDRQFKMVPATCNVLLEVLLKHEKKTE 146
Query: 182 AATLFQTMLDNHKTPNTQAVNSETFNIMVNEYFRLGKVSEALTVFRQVGKE-KAKAFQMD 358
A TLF MLDNH PN QAVNS+TFNIMVNE F+ GK +EA+ FR+VG + K++ F MD
Sbjct: 147 AWTLFDQMLDNHTPPNFQAVNSDTFNIMVNECFKHGKFAEAVETFRKVGTQPKSRPFAMD 206
Query: 359 GAGYNNLLGRLCEHGMLEEAEKLFQEMVGKSVILDYNTYRFLIEAYFKEERIDDVLQKFQ 538
AGYNN++ R CE GM+ +AE F E+ KS+ D T+R LIE+Y K E+IDD L+ F
Sbjct: 207 VAGYNNIIARFCEQGMMADAETFFAELCSKSLSPDVPTHRTLIESYLKIEQIDDALRVFN 266
Query: 539 MLVESNIKGNPRFFSMVFGGLFTKGKLHEVADFLKRLGEREVKPDVSTYELVINELCRDG 718
+V+ ++ F +MVFG L GK + A L ++GER+ KPD + Y++VI LC +G
Sbjct: 267 RMVDVGLRVVASFGNMVFGELIKNGKAADCAQILTKMGERDPKPDPTCYDVVIRGLCNEG 326
Query: 719 KLDLARDLLGDMVRYSPHRVVRVTPTLRNSVDEAFGKEGRTDEIERVLGRSFEARQANFA 898
LD +R+LL ++RY + +TPTL V EAF K GR +EIER+L + A
Sbjct: 327 ALDASRELLDQIMRYG----IGLTPTLEEFVKEAFVKAGRHEEIERLLNMNKWGHAAYRP 382
Query: 899 RGLSSGVQQAPFESRQGTFARGPP 970
+ Q+ + G +GPP
Sbjct: 383 LSGPPRISQSQVPPQMGGPLQGPP 406