BLASTX nr result

ID: Coptis23_contig00007829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007829
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001142956.1| uncharacterized protein LOC100275407 [Zea ma...   150   4e-34
dbj|BAJ94605.1| predicted protein [Hordeum vulgare subsp. vulgare]    147   3e-33
ref|XP_002466498.1| hypothetical protein SORBIDRAFT_01g008810 [S...   146   6e-33
gb|ACG47290.1| hypothetical protein [Zea mays]                        146   6e-33
ref|NP_001130861.1| uncharacterized protein LOC100191965 [Zea ma...   144   3e-32

>ref|NP_001142956.1| uncharacterized protein LOC100275407 [Zea mays]
           gi|195608620|gb|ACG26140.1| hypothetical protein [Zea
           mays] gi|195612036|gb|ACG27848.1| hypothetical protein
           [Zea mays] gi|413933143|gb|AFW67694.1| hypothetical
           protein ZEAMMB73_067092 [Zea mays]
          Length = 240

 Score =  150 bits (378), Expect = 4e-34
 Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
 Frame = -1

Query: 504 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK---TKVEVEREKENVDVWASVKRRWKE 334
           V  E ++ W+RDS++EIVR++GEAPFL+ ++S     +V V RE    + W  V+RRW  
Sbjct: 88  VGEEKVERWMRDSIAEIVRHVGEAPFLVHLFSSGEGERVTVRREPAAPESWPDVRRRWGP 147

Query: 333 G-CPIPDGVILVEQLDGDDDGSKKMEDLTGRTREWGVLIQGRGIDCPSCYILKTCRVLSS 157
           G    PDG+ILVEQ+  D  G+    +   +   WG+++Q RG++  SCY+L TCRV SS
Sbjct: 148 GGARRPDGIILVEQVASDGGGASAASEAARQV--WGLVVQARGMERASCYVLSTCRVRSS 205

Query: 156 IGFCTHFCLVRAKCFGETAELQLQNSW 76
            GFCTHFCL RA+CFG+  ELQL+N+W
Sbjct: 206 AGFCTHFCLARAQCFGDPVELQLRNAW 232


>dbj|BAJ94605.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 240

 Score =  147 bits (370), Expect = 3e-33
 Identities = 71/147 (48%), Positives = 101/147 (68%), Gaps = 4/147 (2%)
 Frame = -1

Query: 504 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSKTK--VEVEREKENVDVWASVKRRWKEG 331
           V  E ++ W+R+S++EIVR++GEAPFL+ ++S  +  V V RE  + + W  V+RRW  G
Sbjct: 90  VGEERVEGWMRESIAEIVRHVGEAPFLVHLFSDGREGVTVRRETASAEAWPDVRRRWGPG 149

Query: 330 CPI-PDGVILVEQLDGDDDGSKKMEDLTGRTRE-WGVLIQGRGIDCPSCYILKTCRVLSS 157
               PDG+ILVEQ+      +  +ED     R+ WG+++Q RG++C +CY+L TCRV S 
Sbjct: 150 GQRRPDGIILVEQV-----AAAAVEDGAEAARQVWGLVVQARGMECAACYVLDTCRVRSP 204

Query: 156 IGFCTHFCLVRAKCFGETAELQLQNSW 76
            GFCTHFCL RA+CFGE  ELQL+N+W
Sbjct: 205 AGFCTHFCLARAQCFGEPLELQLRNAW 231


>ref|XP_002466498.1| hypothetical protein SORBIDRAFT_01g008810 [Sorghum bicolor]
           gi|241920352|gb|EER93496.1| hypothetical protein
           SORBIDRAFT_01g008810 [Sorghum bicolor]
          Length = 237

 Score =  146 bits (368), Expect = 6e-33
 Identities = 71/149 (47%), Positives = 97/149 (65%), Gaps = 6/149 (4%)
 Frame = -1

Query: 504 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSKT-----KVEVEREKENVDVWASVKRRW 340
           V  E ++ W+R+S++EIVR+IGEAPFL+ ++S       +V V RE    + WA V+RRW
Sbjct: 85  VGEEKVEGWMRESIAEIVRHIGEAPFLVHLFSNDDGEGERVTVRREPAAPESWADVRRRW 144

Query: 339 KEGCPI-PDGVILVEQLDGDDDGSKKMEDLTGRTREWGVLIQGRGIDCPSCYILKTCRVL 163
             G    PDG+ILVEQ+  D   S          + WG+++Q RG++C SCY+L TCRV 
Sbjct: 145 GPGGQRKPDGIILVEQVAADGGASAS----EAARQVWGLVVQARGMECASCYVLDTCRVR 200

Query: 162 SSIGFCTHFCLVRAKCFGETAELQLQNSW 76
           S  GFCTHFCL R +CFG+  ELQL+N+W
Sbjct: 201 SPAGFCTHFCLARVQCFGDPVELQLRNAW 229


>gb|ACG47290.1| hypothetical protein [Zea mays]
          Length = 238

 Score =  146 bits (368), Expect = 6e-33
 Identities = 77/151 (50%), Positives = 99/151 (65%), Gaps = 8/151 (5%)
 Frame = -1

Query: 504 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK-----TKVEVEREKENVDVWASVKRRW 340
           V  E +D WIR+S++EIVR+IGEAPFL+ ++S        V V RE    + W  V+RRW
Sbjct: 83  VGEEKVDGWIRESIAEIVRHIGEAPFLVHLFSSGDGDGEHVTVRRETAAPESWPDVRRRW 142

Query: 339 KEGCPI-PDGVILVEQLDGD--DDGSKKMEDLTGRTREWGVLIQGRGIDCPSCYILKTCR 169
             G    PDGVILVEQ+     D G+   E      + WG+++Q RG++  SCY+L TCR
Sbjct: 143 GMGGQRRPDGVILVEQVAAVAVDGGASASE---AARQVWGLVVQARGMEHASCYVLDTCR 199

Query: 168 VLSSIGFCTHFCLVRAKCFGETAELQLQNSW 76
           VLSS GFCTHFCL RAKCFG+  ELQL+N+W
Sbjct: 200 VLSSAGFCTHFCLARAKCFGDPVELQLRNAW 230


>ref|NP_001130861.1| uncharacterized protein LOC100191965 [Zea mays]
           gi|194690292|gb|ACF79230.1| unknown [Zea mays]
           gi|414872650|tpg|DAA51207.1| TPA: hypothetical protein
           ZEAMMB73_570530 [Zea mays]
          Length = 238

 Score =  144 bits (362), Expect = 3e-32
 Identities = 76/151 (50%), Positives = 98/151 (64%), Gaps = 8/151 (5%)
 Frame = -1

Query: 504 VSVENLDEWIRDSVSEIVRNIGEAPFLMQVYSK-----TKVEVEREKENVDVWASVKRRW 340
           V  E +D WIR+S++EIVR+IGEAPFL+ ++S        V V RE    + W  V+RRW
Sbjct: 83  VGEEKVDGWIRESIAEIVRHIGEAPFLVHLFSSGDGDGEHVTVRRETAAPESWPDVRRRW 142

Query: 339 KEGCPI-PDGVILVEQLDGD--DDGSKKMEDLTGRTREWGVLIQGRGIDCPSCYILKTCR 169
             G    PDGVILVEQ+     D G+   E      + WG+++Q RG++  SCY+L TCR
Sbjct: 143 GMGGQRRPDGVILVEQVAAVAVDGGASASE---AARQVWGLVVQARGMEHASCYVLDTCR 199

Query: 168 VLSSIGFCTHFCLVRAKCFGETAELQLQNSW 76
           V SS GFCTHFCL RAKCFG+  ELQL+N+W
Sbjct: 200 VRSSAGFCTHFCLARAKCFGDPVELQLRNAW 230


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