BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007816
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-b...    66   5e-09
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifoli...    62   7e-08
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    62   9e-08
gb|ABR18782.1| class S F-box protein [Nicotiana alata]                 61   1e-07

>gb|AAR15913.1| S3 self-incompatibility locus-linked putative F-box protein S3-A113
           [Petunia integrifolia subsp. inflata]
          Length = 376

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
 Frame = -1

Query: 556 MEVLPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNNNDDHQLI 377
           M+ LP+DVV  IL+ LPV SLLRFK  CK++C++I+SS FI  HL    ++  N   +L+
Sbjct: 1   MKELPQDVVIYILVMLPVKSLLRFKCSCKTFCNIIKSSTFIYLHL----NHTTNVKDELV 56

Query: 376 ILDPS-QCDDTPCYSLRFSLLSA-TGTNYK-VPKVLDLPH-HFDNALESPTIIASCNG 215
           +L  S + DD   Y    S LS+  G ++K +   +++PH    +A     +I  CNG
Sbjct: 57  LLKRSFKTDDYNFYKSILSFLSSKEGYDFKSISPDVEIPHLTTTSACVFHQLIGPCNG 114


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
 Frame = -1

Query: 556 MEVLPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNNNDDHQLI 377
           M  LP+D++  IL +LPV SLLRFK VCK W SLI    F+  HL T ++ N+N   +L+
Sbjct: 1   MSKLPQDIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLL 60

Query: 376 ILDPSQCDDTPCYSLRFSLLSATGTNYKVPKVLDLPHHFDNALESPT----IIASCNGXX 209
           +        TP  S+ F   S  G      + L+ P   D    SPT    I+ SC+G  
Sbjct: 61  L-----STRTP-QSVDFEAAS-EGDEDNAVQELEYP---DVVRCSPTYFIGIMGSCDG-- 108

Query: 208 XXXXXXXXXXXXXXXXXXXXXXXXXXCLQPDLSKNVSLWNPALKEFR 68
                                     CL  D +K V LWNP+ ++++
Sbjct: 109 ------------------------LICLFVDYAKLV-LWNPSTRDYK 130


>gb|ABX82525.1| S-locus F-box-like protein b [Petunia integrifolia subsp. inflata]
          Length = 394

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
 Frame = -1

Query: 559 VMEVLPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNNNDDHQL 380
           +M+ LPEDV   IL   PV +LLRFK + K+W +LIESS FI  HL      NN    + 
Sbjct: 6   IMKHLPEDVAMYILSRFPVKALLRFKFISKTWSTLIESSTFINIHLNRATTTNN----EF 61

Query: 379 IILDPSQCDDTPCYSLRFSLLSATGTNYKVPKV--LDLPH-HFDNALESPTIIASCNG 215
           ++   S  ++T  +    S+LS    +  +  +  LDLP+  F        ++  CNG
Sbjct: 62  LLFSRSYREETEGFKNALSILSCGNDDDLIHTISDLDLPYLTFTQRYLFNKLVGPCNG 119


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 41/111 (36%), Positives = 56/111 (50%)
 Frame = -1

Query: 547 LPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNNNDDHQLIILD 368
           LPEDVV  IL  LPV +LL+FK VCKSW ++I S  FI++HL      +++ D  L+   
Sbjct: 42  LPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNFISKHLRNYYSKSDDSDCLLVQYC 101

Query: 367 PSQCDDTPCYSLRFSLLSATGTNYKVPKVLDLPHHFDNALESPTIIASCNG 215
            +Q  +     L   LL  T      PKVL      +    SP +   C+G
Sbjct: 102 VTQAGELESLEL---LLDET------PKVLSYASLGNMPFHSPFLCGPCDG 143


>gb|ABR18782.1| class S F-box protein [Nicotiana alata]
          Length = 382

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
 Frame = -1

Query: 559 VMEVLPEDVVFTILLWLPVASLLRFKSVCKSWCSLIESSPFITQHLATLKDNNNNDDHQL 380
           +M+ LPED+V  ++L LPV SLLR KS C ++C++I+SS FI  HL    +   N   +L
Sbjct: 5   IMKELPEDLVIYVILMLPVKSLLRLKSSCITFCNIIKSSTFINLHL----NRTTNGKDEL 60

Query: 379 IILDPSQCDDTPCYS---LRFSLLSATGTNYKVPKVLDLPHHFD-NALESPTIIASCNG 215
           I+   S   + P      L F L   T     +   +++PH  + NA     +I  CNG
Sbjct: 61  ILFKRSFKQEEPNLHKNVLSFLLSEDTFNLKPISPDVEIPHLTNTNASVFHQLIGPCNG 119