BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007814
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   524   e-146
ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   513   e-143
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor ...   509   e-142
ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141

>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
            gi|302143337|emb|CBI21898.3| unnamed protein product
            [Vitis vinifera]
          Length = 452

 Score =  524 bits (1350), Expect = e-146
 Identities = 245/308 (79%), Positives = 279/308 (90%), Gaps = 1/308 (0%)
 Frame = +3

Query: 6    IMESDDSFGSS-QPLAVYVWKNSFWGVDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWG 182
            I +SDDS  +S +PLAV+VWKN+FWGVDHQWDG+ FATAGAQVDIWDHNRS+PV+TFQWG
Sbjct: 143  ISDSDDSSDNSMKPLAVHVWKNAFWGVDHQWDGNLFATAGAQVDIWDHNRSQPVNTFQWG 202

Query: 183  NDTFTSVRFNPGEPNLLATSDRERNITLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFT 362
            ND+  +VRFNPGEP++LA S  +R++ LYDLR+SSP  +L M+TKTNSISWNPMEPMNFT
Sbjct: 203  NDSVIAVRFNPGEPDILAASASDRSLILYDLRMSSPARKLIMRTKTNSISWNPMEPMNFT 262

Query: 363  AANEDCNCYSYDARKLDEAKCVHKGHVNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 542
            AANEDCNCYSYDARKLDEAKCVHK HV+AVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH
Sbjct: 263  AANEDCNCYSYDARKLDEAKCVHKDHVSAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 322

Query: 543  SREIYHTKRMQRVFSVKFSCDGTYVLSGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDE 722
            SREIYHTKRMQRVF VKF+CD +YV+SGSDDTNLRLWKA+ASEQLGV+LPRERKKHEY E
Sbjct: 323  SREIYHTKRMQRVFCVKFTCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKHEYHE 382

Query: 723  AIKNRYKHLPEVKRIVRHKHLPKPIYNASKLSRQKIDKERRKDANRRAHSAPGSMPTETV 902
            A+KNRYKHLPEVKRIVRH+HLPKPI+ A+ L R   + ERRK+  R+AHSAPGS+ TE +
Sbjct: 383  AVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTMTEAERRKEEKRKAHSAPGSISTEPL 442

Query: 903  RKRRIIKE 926
            RKRRII+E
Sbjct: 443  RKRRIIQE 450


>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
            nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis]
          Length = 452

 Score =  513 bits (1320), Expect = e-143
 Identities = 238/308 (77%), Positives = 277/308 (89%), Gaps = 1/308 (0%)
 Frame = +3

Query: 6    IMESDD-SFGSSQPLAVYVWKNSFWGVDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWG 182
            +MESD  S  S++P A+YV KN+FWGVDHQWDG+ FAT GAQVDIW+HNRS+PV++F+WG
Sbjct: 143  MMESDGPSNRSAEPQAIYVGKNAFWGVDHQWDGELFATGGAQVDIWNHNRSQPVNSFEWG 202

Query: 183  NDTFTSVRFNPGEPNLLATSDRERNITLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFT 362
             DT  SVRFNPGEPNLLA S  +R+ITLYDLR+SSP  +L M+T+TNSI+WNPMEPMNFT
Sbjct: 203  TDTVISVRFNPGEPNLLAASASDRSITLYDLRVSSPARKLIMRTRTNSIAWNPMEPMNFT 262

Query: 363  AANEDCNCYSYDARKLDEAKCVHKGHVNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 542
            AANEDCNCYS+DARKLDEAKCVHK HV+AVMDID+SPTGREFVTGSYDRTVRIF YNGGH
Sbjct: 263  AANEDCNCYSFDARKLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRTVRIFPYNGGH 322

Query: 543  SREIYHTKRMQRVFSVKFSCDGTYVLSGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDE 722
            SREIYHTKRMQRVF VKFSCDG+Y++SGSDDTNLRLWKA+ASEQLGV+LPRERK+HEY+E
Sbjct: 323  SREIYHTKRMQRVFCVKFSCDGSYIISGSDDTNLRLWKAKASEQLGVLLPRERKRHEYNE 382

Query: 723  AIKNRYKHLPEVKRIVRHKHLPKPIYNASKLSRQKIDKERRKDANRRAHSAPGSMPTETV 902
            A+KNRYKHLPE+KRIVRH+HLPKPIY A+++ R   + E+RK+  RRAHS PGS+ TE +
Sbjct: 383  AVKNRYKHLPEIKRIVRHRHLPKPIYKAAEIRRTVTEAEKRKEDRRRAHSTPGSVVTEPL 442

Query: 903  RKRRIIKE 926
            RKRRIIKE
Sbjct: 443  RKRRIIKE 450


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  513 bits (1320), Expect = e-143
 Identities = 243/308 (78%), Positives = 277/308 (89%), Gaps = 1/308 (0%)
 Frame = +3

Query: 6    IMESDD-SFGSSQPLAVYVWKNSFWGVDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWG 182
            IM+SD+ S  SS+P AVY+ +N+FW VDHQW+GD FATAGAQVDIW+HNRS+PV++F+WG
Sbjct: 143  IMDSDNLSDCSSEPRAVYMGENAFWAVDHQWNGDLFATAGAQVDIWNHNRSQPVNSFKWG 202

Query: 183  NDTFTSVRFNPGEPNLLATSDRERNITLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFT 362
             D+  SVRFNPGEPNLL TS  +R+I LYDLR+SSP  +L M+TKTNSISWNPMEPMNFT
Sbjct: 203  TDSVISVRFNPGEPNLLVTSASDRSIILYDLRVSSPARKLIMRTKTNSISWNPMEPMNFT 262

Query: 363  AANEDCNCYSYDARKLDEAKCVHKGHVNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 542
            AANEDCNCYSYDARKL+EAKCVHK HV+AVMDID+SPTGREFVTGSYDRTVRIFQYNGGH
Sbjct: 263  AANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGH 322

Query: 543  SREIYHTKRMQRVFSVKFSCDGTYVLSGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDE 722
            SREIYHTKRMQRVF VKFSCD +YV+SGSDDTNLRLWKA+ASEQLGV+LPRE+K+HEY+E
Sbjct: 323  SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPREQKRHEYNE 382

Query: 723  AIKNRYKHLPEVKRIVRHKHLPKPIYNASKLSRQKIDKERRKDANRRAHSAPGSMPTETV 902
            A+KNRYKHLPEVKRIVRH+HLPKPIY A  L R  I+ ERRKD  R+AHSAPGS+ TE +
Sbjct: 383  ALKNRYKHLPEVKRIVRHRHLPKPIYKAGVLRRVMIEAERRKDQRRKAHSAPGSIVTEPM 442

Query: 903  RKRRIIKE 926
            RKRRIIKE
Sbjct: 443  RKRRIIKE 450


>ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Glycine max]
          Length = 452

 Score =  509 bits (1311), Expect = e-142
 Identities = 237/308 (76%), Positives = 275/308 (89%), Gaps = 1/308 (0%)
 Frame = +3

Query: 6    IMESDDSFGSS-QPLAVYVWKNSFWGVDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWG 182
            +MESDDS  S+ +P +VYVWKN+FWG DHQWDG+ FATAGAQVDIW+HNRS+P+++F+WG
Sbjct: 143  LMESDDSTKSTVEPASVYVWKNAFWGADHQWDGEHFATAGAQVDIWNHNRSQPINSFEWG 202

Query: 183  NDTFTSVRFNPGEPNLLATSDRERNITLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFT 362
            +DT  SVRFNPGEPNLLATS  +R+I LYDLR+SSPV ++ M TKTNSI WNPMEP+NFT
Sbjct: 203  SDTVISVRFNPGEPNLLATSASDRSIILYDLRMSSPVRKMIMMTKTNSICWNPMEPINFT 262

Query: 363  AANEDCNCYSYDARKLDEAKCVHKGHVNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 542
            AANED NCYSYDARKLDEAKCVH+ HV+AVMD+DYSPTGREFVTGSYDRTVRIFQYNGGH
Sbjct: 263  AANEDGNCYSYDARKLDEAKCVHRDHVSAVMDVDYSPTGREFVTGSYDRTVRIFQYNGGH 322

Query: 543  SREIYHTKRMQRVFSVKFSCDGTYVLSGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDE 722
            S+EIYHTKRMQRVF+VKFS DG+YV+SGSDDTNLRLWKA+ASEQLGV+LPRERKKHEY E
Sbjct: 323  SKEIYHTKRMQRVFAVKFSGDGSYVISGSDDTNLRLWKAKASEQLGVILPRERKKHEYHE 382

Query: 723  AIKNRYKHLPEVKRIVRHKHLPKPIYNASKLSRQKIDKERRKDANRRAHSAPGSMPTETV 902
            AIK RYKHLPEV RI RH+HLP+PI+ AS L R   D +RRK+  R+AHSAPGS+ T+ +
Sbjct: 383  AIKKRYKHLPEVNRIARHRHLPRPIFKASALMRVMADAKRRKEEKRKAHSAPGSITTQPL 442

Query: 903  RKRRIIKE 926
            R+RRIIKE
Sbjct: 443  RRRRIIKE 450


>ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|222853313|gb|EEE90860.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  508 bits (1308), Expect = e-141
 Identities = 240/308 (77%), Positives = 274/308 (88%), Gaps = 1/308 (0%)
 Frame = +3

Query: 6    IMESDDSFG-SSQPLAVYVWKNSFWGVDHQWDGDRFATAGAQVDIWDHNRSEPVSTFQWG 182
            IMES +S   SS+P AVY+ +N++W VDHQW GD FATAGAQVDIW+HNRS+PV++F+WG
Sbjct: 143  IMESGNSSDCSSEPRAVYMGENAYWAVDHQWSGDLFATAGAQVDIWNHNRSQPVNSFKWG 202

Query: 183  NDTFTSVRFNPGEPNLLATSDRERNITLYDLRLSSPVARLKMKTKTNSISWNPMEPMNFT 362
             D+  SVRFNPGEPNLLATS  +R+I LYDLR+SSP  +L M+TKTNSISWNPMEPMNFT
Sbjct: 203  TDSVISVRFNPGEPNLLATSASDRSIMLYDLRVSSPARKLIMRTKTNSISWNPMEPMNFT 262

Query: 363  AANEDCNCYSYDARKLDEAKCVHKGHVNAVMDIDYSPTGREFVTGSYDRTVRIFQYNGGH 542
            AANEDCNCYSYDARK DEAKCVHK HV+AVMDID+SPTGREFVTGSYDRTVRIFQYNGGH
Sbjct: 263  AANEDCNCYSYDARKFDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRTVRIFQYNGGH 322

Query: 543  SREIYHTKRMQRVFSVKFSCDGTYVLSGSDDTNLRLWKAQASEQLGVVLPRERKKHEYDE 722
            SREIYHTKRMQRVF VKFSCD +YV+SGSDDTNLRLWKA+ASEQLG++LPRE+++HEY+E
Sbjct: 323  SREIYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGILLPREQRRHEYNE 382

Query: 723  AIKNRYKHLPEVKRIVRHKHLPKPIYNASKLSRQKIDKERRKDANRRAHSAPGSMPTETV 902
            A+K RYKHLPEVKRIVRH+HLPKPIY A  L R  I+ ERRKD  R+AHSAPGS+ TE +
Sbjct: 383  ALKTRYKHLPEVKRIVRHRHLPKPIYKAGVLRRVMIEAERRKDHRRKAHSAPGSIVTEPM 442

Query: 903  RKRRIIKE 926
            RKRRIIKE
Sbjct: 443  RKRRIIKE 450