BLASTX nr result

ID: Coptis23_contig00007792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007792
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subuni...   186   8e-45
emb|CBI25461.3| unnamed protein product [Vitis vinifera]              186   8e-45
ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative ...   179   6e-43
ref|XP_004148181.1| PREDICTED: anaphase-promoting complex subuni...   174   2e-41
ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40

>ref|XP_002272442.2| PREDICTED: anaphase-promoting complex subunit 1-like [Vitis
           vinifera]
          Length = 1716

 Score =  186 bits (471), Expect = 8e-45
 Identities = 95/150 (63%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
 Frame = +1

Query: 163 YIRGNRIIWSSGSRVLKRYTLQSSVIMACWCNLGALSEPHLCVLQVGTLTVYDVGGEVVS 342
           +IRGNRIIWS+GSRV KR+TL SSV+ ACWC LG +SE  LCVLQ+ +LT+Y+  GEVVS
Sbjct: 71  FIRGNRIIWSTGSRVYKRFTLPSSVVKACWCRLGDMSEALLCVLQIDSLTIYNTSGEVVS 130

Query: 343 IPLPRTITSIWPLPCGLLLQKAADVNYPAFGSYSASSTSLNARDFPRLKRELGYSPQHN- 519
           IPL RT+TSIWPLP GLLLQ+A +   PA   +S+SS  L  RD  R KRE+G+SP+ N 
Sbjct: 131 IPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREIGHSPRQNF 190

Query: 520 --LHT-DHTIKGDATKLSSHLILKDPLEEP 600
             L+T D+ IKGD    SSHLILKDPLEEP
Sbjct: 191 SLLNTFDYIIKGDGASFSSHLILKDPLEEP 220


>emb|CBI25461.3| unnamed protein product [Vitis vinifera]
          Length = 1931

 Score =  186 bits (471), Expect = 8e-45
 Identities = 95/150 (63%), Positives = 114/150 (76%), Gaps = 4/150 (2%)
 Frame = +1

Query: 163 YIRGNRIIWSSGSRVLKRYTLQSSVIMACWCNLGALSEPHLCVLQVGTLTVYDVGGEVVS 342
           +IRGNRIIWS+GSRV KR+TL SSV+ ACWC LG +SE  LCVLQ+ +LT+Y+  GEVVS
Sbjct: 71  FIRGNRIIWSTGSRVYKRFTLPSSVVKACWCRLGDMSEALLCVLQIDSLTIYNTSGEVVS 130

Query: 343 IPLPRTITSIWPLPCGLLLQKAADVNYPAFGSYSASSTSLNARDFPRLKRELGYSPQHN- 519
           IPL RT+TSIWPLP GLLLQ+A +   PA   +S+SS  L  RD  R KRE+G+SP+ N 
Sbjct: 131 IPLARTVTSIWPLPFGLLLQQATEGISPAHLPFSSSSPLLGGRDITRPKREIGHSPRQNF 190

Query: 520 --LHT-DHTIKGDATKLSSHLILKDPLEEP 600
             L+T D+ IKGD    SSHLILKDPLEEP
Sbjct: 191 SLLNTFDYIIKGDGASFSSHLILKDPLEEP 220


>ref|XP_002528308.1| meiotic checkpoint regulator cut4, putative [Ricinus communis]
           gi|223532263|gb|EEF34066.1| meiotic checkpoint regulator
           cut4, putative [Ricinus communis]
          Length = 1703

 Score =  179 bits (455), Expect = 6e-43
 Identities = 90/151 (59%), Positives = 113/151 (74%), Gaps = 4/151 (2%)
 Frame = +1

Query: 163 YIRGNRIIWSSGSRVLKRYTLQSSVIMACWCNLGALSEPHLCVLQVGTLTVYDVGGEVVS 342
           +IRGNRIIWS+GSRV KR+T  S V MACWC+LG +SE  LC+LQ+ +LT+Y++ GEVVS
Sbjct: 71  FIRGNRIIWSTGSRVFKRFTSPSPVKMACWCHLGEMSEALLCILQIDSLTIYNISGEVVS 130

Query: 343 IPLPRTITSIWPLPCGLLLQKAADVNYPAFGSYSASSTSLNARDFPRLKRELGYSPQHNL 522
           IPLP TITSIWPLP GLLLQ AA+ + P   ++ +++  L ARD   L+RE+G+SPQ N+
Sbjct: 131 IPLPCTITSIWPLPFGLLLQPAAEGSSPMQSTFLSTNPLLGARDISSLRREIGHSPQQNV 190

Query: 523 ----HTDHTIKGDATKLSSHLILKDPLEEPQ 603
                 D+ IK D   LSSHLILKD LEEPQ
Sbjct: 191 TFSNAFDNVIKADTVTLSSHLILKDLLEEPQ 221


>ref|XP_004148181.1| PREDICTED: anaphase-promoting complex subunit 1-like [Cucumis
           sativus]
          Length = 1707

 Score =  174 bits (441), Expect = 2e-41
 Identities = 84/151 (55%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
 Frame = +1

Query: 163 YIRGNRIIWSSGSRVLKRYTLQSSVIMACWCNLGALSEPHLCVLQVGTLTVYDVGGEVVS 342
           +IRGNRIIWS+G+RV KR+TL S +I  CWC LG L+E  LCVLQ  +LT+Y+  GEVV+
Sbjct: 71  FIRGNRIIWSTGARVFKRFTLPSPIIKVCWCRLGDLTEALLCVLQTASLTIYNTSGEVVT 130

Query: 343 IPLPRTITSIWPLPCGLLLQKAADVNYPAFGSYSASSTSLNARDFPRLKRELGYSPQHNL 522
           IP+ RTITSIW  P GLL+++A + N P    + +SS  L  RD  R +RE G+SPQ N 
Sbjct: 131 IPISRTITSIWSFPFGLLMEQAVETNSPVHVPFLSSSPLLGIRDIARARRETGHSPQSNA 190

Query: 523 H----TDHTIKGDATKLSSHLILKDPLEEPQ 603
                 DH  KGDA+ +S+HLILKDPLE PQ
Sbjct: 191 SFSSTFDHVFKGDASSISTHLILKDPLESPQ 221


>ref|XP_002312165.1| predicted protein [Populus trichocarpa] gi|222851985|gb|EEE89532.1|
           predicted protein [Populus trichocarpa]
          Length = 1929

 Score =  172 bits (435), Expect = 1e-40
 Identities = 88/152 (57%), Positives = 108/152 (71%), Gaps = 4/152 (2%)
 Frame = +1

Query: 163 YIRGNRIIWSSGSRVLKRYTLQSSVIMACWCNLGALSEPHLCVLQVGTLTVYDVGGEVVS 342
           +IRGN+IIWS+G+RV KR+TL S VIMACWC+LG LSE  LC+L   +LT+Y++ GEVVS
Sbjct: 71  FIRGNKIIWSTGARVFKRFTLPSPVIMACWCHLGDLSEALLCILLTDSLTIYNISGEVVS 130

Query: 343 IPLPRTITSIWPLPCGLLLQKAADVNYPAFGSYSASSTSLNARDFPRLKRELGYSPQHNL 522
           IP+P TITSIWPLP GLLLQ A++ N P     S+ S      D  R KRE+ +SP HN 
Sbjct: 131 IPIPCTITSIWPLPFGLLLQSASE-NSPMQNHLSSPSPLFGVCDMSRAKREIVHSPHHNF 189

Query: 523 HT----DHTIKGDATKLSSHLILKDPLEEPQV 606
                 DH IKGD+  +SSHLILKD LEEP +
Sbjct: 190 GVLGTFDHVIKGDSAIMSSHLILKDLLEEPHL 221


Top