BLASTX nr result

ID: Coptis23_contig00007783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007783
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511353.1| conserved hypothetical protein [Ricinus comm...   109   1e-21
emb|CBI14983.3| unnamed protein product [Vitis vinifera]              100   5e-19
ref|XP_002321620.1| predicted protein [Populus trichocarpa] gi|2...   100   7e-19
ref|XP_002318681.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|XP_003567535.1| PREDICTED: uncharacterized protein LOC100841...    86   2e-14

>ref|XP_002511353.1| conserved hypothetical protein [Ricinus communis]
            gi|223550468|gb|EEF51955.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 342

 Score =  109 bits (272), Expect = 1e-21
 Identities = 61/125 (48%), Positives = 76/125 (60%)
 Frame = -1

Query: 1140 VKFIFNHINMKDPKKEYSFTVLLAHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTM 961
            VKF FN+INM++P +EY+FTV   +DTYTLL CDPH++ TKELI E+N+TNGLFKFVRTM
Sbjct: 149  VKFTFNNINMRNPYEEYTFTVRHENDTYTLLACDPHLNDTKELINELNKTNGLFKFVRTM 208

Query: 960  REKFRASASLGSQAQLFQLDXXXXXXXXXXXXXSFDGNESVGKKSRSQGQTEEFSRSPKK 781
            REKF+  ASLG   Q   L              S     SV     ++  + E  +  KK
Sbjct: 209  REKFQEVASLGILPQSTSLHQESATISVSAPVLSVSTERSVSPMKENE-HSYEVKKQSKK 267

Query: 780  GNQGR 766
             N GR
Sbjct: 268  INLGR 272


>emb|CBI14983.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  100 bits (250), Expect = 5e-19
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = -1

Query: 1140 VKFIFNHINMKDPKKEYSFTVLLAHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTM 961
            VKFIF +IN K+P +EYSFT+  A+DTYTLL C PH++  KELI E+N+TNGLFKFVR M
Sbjct: 167  VKFIFTNINSKNPSEEYSFTIRHANDTYTLLDCSPHLNDIKELIHELNRTNGLFKFVRIM 226

Query: 960  REKFRASASLGSQAQLFQL 904
            REKF+ +A  G   Q   L
Sbjct: 227  REKFQKAAEFGVLPQFTPL 245


>ref|XP_002321620.1| predicted protein [Populus trichocarpa] gi|222868616|gb|EEF05747.1|
            predicted protein [Populus trichocarpa]
          Length = 244

 Score =  100 bits (249), Expect = 7e-19
 Identities = 46/77 (59%), Positives = 60/77 (77%)
 Frame = -1

Query: 1140 VKFIFNHINMKDPKKEYSFTVLLAHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTM 961
            VKF FN+IN+K+P KEYSFT+   +D YTLL CDP ++ TK+LI E+N+TNGLFKFVR +
Sbjct: 167  VKFTFNNINLKNPYKEYSFTIRYENDMYTLLACDPQLNDTKQLIHELNKTNGLFKFVRKL 226

Query: 960  REKFRASASLGSQAQLF 910
            REKF+ +A LG    +F
Sbjct: 227  REKFQEAAPLGRVLLVF 243


>ref|XP_002318681.1| predicted protein [Populus trichocarpa] gi|222859354|gb|EEE96901.1|
            predicted protein [Populus trichocarpa]
          Length = 245

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = -1

Query: 1140 VKFIFNHINMKDPKKEYSFTVLLAHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTM 961
            VKF  N+IN+K+  +E SFT+   +D YTLL CDP ++ TK+LI E+N+TNGLFKFVR M
Sbjct: 167  VKFTLNNINLKNQDEECSFTIRHENDMYTLLGCDPQLNDTKQLIHELNKTNGLFKFVRKM 226

Query: 960  REKFRASASLG 928
            REKF  SASLG
Sbjct: 227  REKFEESASLG 237


>ref|XP_003567535.1| PREDICTED: uncharacterized protein LOC100841431 [Brachypodium
            distachyon]
          Length = 319

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
 Frame = -1

Query: 1140 VKFIFNHINMKDPKKEYSFTVLLAHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTM 961
            VKF+FN +NM+ P  EY F + +  D Y+L+ CDP +  ++EL++++N TN LFKFVR M
Sbjct: 167  VKFVFNKVNMQSPDNEYLFCMKVTKDKYSLIQCDPLLKDSEELVKDLNCTNDLFKFVRIM 226

Query: 960  REKFRASASLG-SQAQLFQLDXXXXXXXXXXXXXSFDGNESVGKKSRSQGQTEEFSRSPK 784
            R +F+A+A+ G   A  F  D                 +ES   +S S+      SRS  
Sbjct: 227  RARFQAAATKGVHPASSFCPDTSSITASSPPALSVDTTSESTSNQSHSR------SRSKN 280

Query: 783  KGNQGRAGRPPQSASPICXXXXXXXXXXXXXXXXXSGKAGRPPISASPVRRSPRF 619
            +    + GR P+SA+                          P  + S +RRSPRF
Sbjct: 281  QDMHAKRGRTPRSAA-------------------------SPLATPSSMRRSPRF 310


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