BLASTX nr result

ID: Coptis23_contig00007778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007778
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327351.1| predicted protein [Populus trichocarpa] gi|2...   115   7e-24
ref|XP_002325543.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002276580.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   108   6e-22
ref|XP_002534484.1| transcription factor, putative [Ricinus comm...   108   6e-22
emb|CAN64849.1| hypothetical protein VITISV_004128 [Vitis vinifera]   108   6e-22

>ref|XP_002327351.1| predicted protein [Populus trichocarpa] gi|222835721|gb|EEE74156.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  115 bits (288), Expect = 7e-24
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = +1

Query: 400 RFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVWMHNNKNTLRK 579
           RFRTKFTQEQKE+M+EFAE++GWRIQKHDD+ALNQFC E G+KRNVLKVWMHNNKN  R+
Sbjct: 133 RFRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGIKRNVLKVWMHNNKNAHRR 192

Query: 580 RD 585
           RD
Sbjct: 193 RD 194


>ref|XP_002325543.1| predicted protein [Populus trichocarpa] gi|222862418|gb|EEE99924.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  112 bits (281), Expect = 4e-23
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = +1

Query: 400 RFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVWMHNNKNTLRK 579
           R RTKFTQEQKE+M+EFAE++GWRIQKHDD+ALNQFC E G+KRNVLKVWMHNNKN  R+
Sbjct: 110 RLRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGVKRNVLKVWMHNNKNAHRR 169

Query: 580 RD 585
           RD
Sbjct: 170 RD 171


>ref|XP_002276580.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 275

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/86 (62%), Positives = 62/86 (72%)
 Frame = +1

Query: 328 SETPDDQMREEXXXXXXXXXXXXXRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQF 507
           SETP+   R +             RFRTKFTQEQKE+M+E AERLGWRIQK DDV L+QF
Sbjct: 168 SETPE---RGDVQIATMMTTTKNKRFRTKFTQEQKERMLELAERLGWRIQKQDDVVLSQF 224

Query: 508 CLENGLKRNVLKVWMHNNKNTLRKRD 585
           C E G+KRNVLKVWMHNNKN  R+R+
Sbjct: 225 CSELGIKRNVLKVWMHNNKNAHRRRE 250


>ref|XP_002534484.1| transcription factor, putative [Ricinus communis]
           gi|223525213|gb|EEF27897.1| transcription factor,
           putative [Ricinus communis]
          Length = 245

 Score =  108 bits (271), Expect = 6e-22
 Identities = 48/62 (77%), Positives = 57/62 (91%)
 Frame = +1

Query: 400 RFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQFCLENGLKRNVLKVWMHNNKNTLRK 579
           RFRTKFTQEQK++M+EFAE++GWRI K+DD+ALNQFC E G+KRNVLKVWMHNNKN  R+
Sbjct: 163 RFRTKFTQEQKDRMLEFAEKIGWRINKNDDMALNQFCDEVGVKRNVLKVWMHNNKNAHRR 222

Query: 580 RD 585
           RD
Sbjct: 223 RD 224


>emb|CAN64849.1| hypothetical protein VITISV_004128 [Vitis vinifera]
          Length = 243

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/86 (62%), Positives = 62/86 (72%)
 Frame = +1

Query: 328 SETPDDQMREEXXXXXXXXXXXXXRFRTKFTQEQKEKMMEFAERLGWRIQKHDDVALNQF 507
           SETP+   R +             RFRTKFTQEQKE+M+E AERLGWRIQK DDV L+QF
Sbjct: 136 SETPE---RGDVQIATMMTTTKNKRFRTKFTQEQKERMLELAERLGWRIQKQDDVVLSQF 192

Query: 508 CLENGLKRNVLKVWMHNNKNTLRKRD 585
           C E G+KRNVLKVWMHNNKN  R+R+
Sbjct: 193 CSELGIKRNVLKVWMHNNKNAHRRRE 218


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