BLASTX nr result

ID: Coptis23_contig00007776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007776
         (2295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...   791   0.0  
emb|CBI33855.3| unnamed protein product [Vitis vinifera]              791   0.0  
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...   782   0.0  
ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...   778   0.0  
ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp....   718   0.0  

>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score =  791 bits (2044), Expect = 0.0
 Identities = 365/538 (67%), Positives = 442/538 (82%), Gaps = 4/538 (0%)
 Frame = +1

Query: 445  SRLEEQFRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRIFEIYIH 624
            SRLE+   V  +EP+LSE++LRIN QLQEDELLAM++IYG+N+ IL  + GL+ F+I++H
Sbjct: 342  SRLEKLV-VGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVH 400

Query: 625  IETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKS 804
            IE   ELT++AKL SS+G              ++ S++F Y F V++LPPI+L CLLPK+
Sbjct: 401  IEALGELTVTAKLNSSSGRT----------TESDGSDDFSYSFNVQYLPPIVLTCLLPKA 450

Query: 805  YPSHQPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINK 984
            YPSH PPYFTI++QWLDS  IS LC MLDSLW +QPGQEV+YQWVEWL SS LSYLG +K
Sbjct: 451  YPSHLPPYFTISVQWLDSISISKLCSMLDSLWKEQPGQEVLYQWVEWLHSSCLSYLGFDK 510

Query: 985  ELVLGPLYMPHSGDRRAVSKSVSPEVDIPSMMNYNDDKCHEVFRQNLHECCICFGEHAGT 1164
            E+VLGP  M +S DRRA+S SVS +VDIPSM +YND+K HE F +N HECCICF E+AGT
Sbjct: 511  EIVLGPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCICFTEYAGT 570

Query: 1165 EFIRLPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERW 1344
            EFI+LPC+HF+CWKCM+ YS +HVKEGT ++LLCP+ KC  MVPP LLK LLGDE +E W
Sbjct: 571  EFIKLPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLLGDEEFEHW 630

Query: 1345 ESLLLQKTLASMSDVVYCPRCETACLEDEDHHGQCSKCLYSFCSLCGDRRHVGTTCMSPE 1524
            ESL+LQKTL SMSD+ YCPRCET C+EDED H QCSKC +SFC+LC DRRHVG  CM+PE
Sbjct: 631  ESLMLQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHVGLECMTPE 690

Query: 1525 LKLLLLQARQGSFQLKEDQRRKEQEIINDILSVREIFRDAKQCPSCKMAISRTEGCNKMV 1704
            +KL +LQ RQ S QLK++QR+KE+E+IN++LSV+EI RDAKQCPSCKMAISRTEGCNKMV
Sbjct: 691  VKLHILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKMV 750

Query: 1705 CENCGKFFCYRCNKAIDGYEHFRQDGCELFPREEIQ----QWEERMNGRQLVGQIQAELY 1872
            C NCG++FCYRCN+AIDGYEHFR   CELFP+E IQ     WE R+N RQ+VGQIQAEL+
Sbjct: 751  CNNCGQYFCYRCNQAIDGYEHFRDSACELFPQEMIQNWEWDWEARLNQRQVVGQIQAELF 810

Query: 1873 AAHGHSCPLCGQMNAKVGNNNHIFCWSCQNHYCYLCQKKVKRSSQHYGPKGCKQHTVG 2046
            A  GHSCP+C Q+N KVGNNNHIFCWSCQ+HYCYLC++ V+RSSQH+GPKGCKQHTVG
Sbjct: 811  ADRGHSCPICRQINVKVGNNNHIFCWSCQSHYCYLCKEIVRRSSQHFGPKGCKQHTVG 868


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  791 bits (2044), Expect = 0.0
 Identities = 365/538 (67%), Positives = 442/538 (82%), Gaps = 4/538 (0%)
 Frame = +1

Query: 445  SRLEEQFRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRIFEIYIH 624
            SRLE+   V  +EP+LSE++LRIN QLQEDELLAM++IYG+N+ IL  + GL+ F+I++H
Sbjct: 136  SRLEKLV-VGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIHVH 194

Query: 625  IETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKS 804
            IE   ELT++AKL SS+G              ++ S++F Y F V++LPPI+L CLLPK+
Sbjct: 195  IEALGELTVTAKLNSSSGRT----------TESDGSDDFSYSFNVQYLPPIVLTCLLPKA 244

Query: 805  YPSHQPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINK 984
            YPSH PPYFTI++QWLDS  IS LC MLDSLW +QPGQEV+YQWVEWL SS LSYLG +K
Sbjct: 245  YPSHLPPYFTISVQWLDSISISKLCSMLDSLWKEQPGQEVLYQWVEWLHSSCLSYLGFDK 304

Query: 985  ELVLGPLYMPHSGDRRAVSKSVSPEVDIPSMMNYNDDKCHEVFRQNLHECCICFGEHAGT 1164
            E+VLGP  M +S DRRA+S SVS +VDIPSM +YND+K HE F +N HECCICF E+AGT
Sbjct: 305  EIVLGPYNMGNSEDRRAISGSVSLDVDIPSMKSYNDEKRHENFSKNFHECCICFTEYAGT 364

Query: 1165 EFIRLPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERW 1344
            EFI+LPC+HF+CWKCM+ YS +HVKEGT ++LLCP+ KC  MVPP LLK LLGDE +E W
Sbjct: 365  EFIKLPCQHFFCWKCMKTYSEMHVKEGTGSQLLCPETKCRAMVPPVLLKRLLGDEEFEHW 424

Query: 1345 ESLLLQKTLASMSDVVYCPRCETACLEDEDHHGQCSKCLYSFCSLCGDRRHVGTTCMSPE 1524
            ESL+LQKTL SMSD+ YCPRCET C+EDED H QCSKC +SFC+LC DRRHVG  CM+PE
Sbjct: 425  ESLMLQKTLESMSDMTYCPRCETICIEDEDQHAQCSKCFFSFCTLCRDRRHVGLECMTPE 484

Query: 1525 LKLLLLQARQGSFQLKEDQRRKEQEIINDILSVREIFRDAKQCPSCKMAISRTEGCNKMV 1704
            +KL +LQ RQ S QLK++QR+KE+E+IN++LSV+EI RDAKQCPSCKMAISRTEGCNKMV
Sbjct: 485  VKLHILQGRQHSSQLKDEQRKKEREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKMV 544

Query: 1705 CENCGKFFCYRCNKAIDGYEHFRQDGCELFPREEIQ----QWEERMNGRQLVGQIQAELY 1872
            C NCG++FCYRCN+AIDGYEHFR   CELFP+E IQ     WE R+N RQ+VGQIQAEL+
Sbjct: 545  CNNCGQYFCYRCNQAIDGYEHFRDSACELFPQEMIQNWEWDWEARLNQRQVVGQIQAELF 604

Query: 1873 AAHGHSCPLCGQMNAKVGNNNHIFCWSCQNHYCYLCQKKVKRSSQHYGPKGCKQHTVG 2046
            A  GHSCP+C Q+N KVGNNNHIFCWSCQ+HYCYLC++ V+RSSQH+GPKGCKQHTVG
Sbjct: 605  ADRGHSCPICRQINVKVGNNNHIFCWSCQSHYCYLCKEIVRRSSQHFGPKGCKQHTVG 662


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
            gi|449525814|ref|XP_004169911.1| PREDICTED: E3
            ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score =  782 bits (2019), Expect = 0.0
 Identities = 364/534 (68%), Positives = 438/534 (82%)
 Frame = +1

Query: 445  SRLEEQFRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRIFEIYIH 624
            SRLE   R SE EP+LSEEQL IN+QLQEDELLA+E+IYGEN+ IL E  G R F+I+IH
Sbjct: 116  SRLEMLQRSSE-EPELSEEQLSINNQLQEDELLALESIYGENVYILDEYKGQRRFQIFIH 174

Query: 625  IETPDELTISAKLLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKS 804
            IE P ++TI+AKL   N ++ L +KS +S       +EF   F V++L PI+L CLLPK 
Sbjct: 175  IENPGDITITAKL---NSSSSLEIKSPNS-------DEFSCSFDVKYLNPIVLTCLLPKV 224

Query: 805  YPSHQPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINK 984
            YPSH PPY+TI+I+WLDS RIS LC +LD +W++Q GQEV+YQWVEWLQ SSL+YL  +K
Sbjct: 225  YPSHLPPYYTISIRWLDSARISRLCSVLDGIWSEQVGQEVVYQWVEWLQMSSLAYLQSDK 284

Query: 985  ELVLGPLYMPHSGDRRAVSKSVSPEVDIPSMMNYNDDKCHEVFRQNLHECCICFGEHAGT 1164
            E++LGP    HSGD RAVS  VSPEVD+P+++NY++ +  E F  NL ECCIC  ++AG 
Sbjct: 285  EIMLGPYDKGHSGDTRAVSGIVSPEVDVPAIINYDNQRRDEDFCMNLQECCICLSQYAGA 344

Query: 1165 EFIRLPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERW 1344
            +F+RLPCKH++CWKCME YSS+HVKEGT++KL CPDAKC  MVPPGLLK LLGDE +ERW
Sbjct: 345  KFVRLPCKHYFCWKCMETYSSMHVKEGTVSKLNCPDAKCDVMVPPGLLKQLLGDEEFERW 404

Query: 1345 ESLLLQKTLASMSDVVYCPRCETACLEDEDHHGQCSKCLYSFCSLCGDRRHVGTTCMSPE 1524
            ES++L KTL SMSDVVYCPRCET CLED DH  QCSKC +SFC+LC +RRHVG  CM+PE
Sbjct: 405  ESMMLTKTLESMSDVVYCPRCETPCLEDVDHDAQCSKCYFSFCTLCSERRHVGIECMTPE 464

Query: 1525 LKLLLLQARQGSFQLKEDQRRKEQEIINDILSVREIFRDAKQCPSCKMAISRTEGCNKMV 1704
            +KL LL+ RQ S QL  +QRRKE+E+IN+++SV+EI RDAKQCPSCKMAISRTEGCNKMV
Sbjct: 465  MKLRLLEERQNSSQLGSEQRRKEREMINELISVKEILRDAKQCPSCKMAISRTEGCNKMV 524

Query: 1705 CENCGKFFCYRCNKAIDGYEHFRQDGCELFPREEIQQWEERMNGRQLVGQIQAELYAAHG 1884
            C NCG++FCYRC+KAIDGY+HFR+  CELFP+E IQQWEERMN RQ++GQIQAEL+  +G
Sbjct: 525  CNNCGQYFCYRCSKAIDGYDHFREGSCELFPQEAIQQWEERMNARQVLGQIQAELFPENG 584

Query: 1885 HSCPLCGQMNAKVGNNNHIFCWSCQNHYCYLCQKKVKRSSQHYGPKGCKQHTVG 2046
            H CP CGQ+NAKVGNNNHI CWSCQ HYCYLC+K VKRSSQHYGPKGCKQHTVG
Sbjct: 585  HPCPNCGQLNAKVGNNNHIRCWSCQIHYCYLCRKVVKRSSQHYGPKGCKQHTVG 638


>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
            predicted protein [Populus trichocarpa]
          Length = 642

 Score =  778 bits (2009), Expect = 0.0
 Identities = 359/535 (67%), Positives = 434/535 (81%), Gaps = 1/535 (0%)
 Frame = +1

Query: 445  SRLEEQFRVSEQEPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRIFEIYIH 624
            +RLEE F +  +EP+LSEEQLRINDQLQEDELLAME+IYG+N  IL  + GLR F+I+IH
Sbjct: 124  TRLEEFF-LGVEEPELSEEQLRINDQLQEDELLAMESIYGDNTFILERQRGLRSFQIHIH 182

Query: 625  IETPDELTISAKLLS-SNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPK 801
            IE P E T++AKL S  + N K G            S+EF Y F+V++LPPI+L CLLPK
Sbjct: 183  IEVPAEFTVTAKLYSLGDCNGKSGS-----------SDEFSYSFEVQYLPPIVLTCLLPK 231

Query: 802  SYPSHQPPYFTIAIQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGIN 981
            SYPSH PPYFTI++QWLDS  IS+LC MLDS+WT+QPG EVIYQW +WLQ+ SLS+LGI+
Sbjct: 232  SYPSHLPPYFTISVQWLDSTSISHLCSMLDSIWTEQPGLEVIYQWADWLQNYSLSFLGID 291

Query: 982  KELVLGPLYMPHSGDRRAVSKSVSPEVDIPSMMNYNDDKCHEVFRQNLHECCICFGEHAG 1161
            K+++LGP    H  DRRA+S SVS EVD+PS+ +YN ++CHE F +NLHECCIC  +   
Sbjct: 292  KDIILGPCVTKHKKDRRAISGSVSLEVDVPSLRSYNAEQCHENFCKNLHECCICCDD--- 348

Query: 1162 TEFIRLPCKHFYCWKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYER 1341
             +FIRLPC+HF+C KCM+ YS IHV EGT+NKL CPDAKCG MVPPGLLK LLGDE YER
Sbjct: 349  -DFIRLPCQHFFCPKCMKRYSDIHVAEGTVNKLQCPDAKCGVMVPPGLLKRLLGDEEYER 407

Query: 1342 WESLLLQKTLASMSDVVYCPRCETACLEDEDHHGQCSKCLYSFCSLCGDRRHVGTTCMSP 1521
            WESL+LQKTL SMSDV YCPRCET C+EDE+ H QCSKCLYSFC+LC +RRH+G  CM+P
Sbjct: 408  WESLMLQKTLESMSDVSYCPRCETPCIEDEEQHAQCSKCLYSFCTLCRERRHLGEVCMTP 467

Query: 1522 ELKLLLLQARQGSFQLKEDQRRKEQEIINDILSVREIFRDAKQCPSCKMAISRTEGCNKM 1701
            E+KL +L+ RQ S  LK+ Q+ +E+E+IN++LSV+EI RDAKQCPSCKMAISRTEGCNKM
Sbjct: 468  EMKLQVLEERQNSSHLKDGQKHREREMINELLSVKEILRDAKQCPSCKMAISRTEGCNKM 527

Query: 1702 VCENCGKFFCYRCNKAIDGYEHFRQDGCELFPREEIQQWEERMNGRQLVGQIQAELYAAH 1881
            VC+NC +FFCYRCNK IDGY+HF+   CELFP+EEIQQWEERMN R++V ++ AEL+  H
Sbjct: 528  VCKNCEQFFCYRCNKGIDGYDHFKDGQCELFPQEEIQQWEERMNPRRVVAEVHAELFPDH 587

Query: 1882 GHSCPLCGQMNAKVGNNNHIFCWSCQNHYCYLCQKKVKRSSQHYGPKGCKQHTVG 2046
             ++CP CGQ N KVGNNNHI CWSCQ HYCYLC+K V+R SQH+GPKGCKQHTVG
Sbjct: 588  VNACPNCGQFNVKVGNNNHILCWSCQMHYCYLCRKIVRRGSQHFGPKGCKQHTVG 642


>ref|XP_002893719.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339561|gb|EFH69978.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 682

 Score =  718 bits (1854), Expect = 0.0
 Identities = 323/528 (61%), Positives = 413/528 (78%), Gaps = 6/528 (1%)
 Frame = +1

Query: 481  EPDLSEEQLRINDQLQEDELLAMEAIYGENLSILREEGGLRIFEIYIHIETPDELTISAK 660
            EP+L+EEQL++NDQLQEDELLA+  IYG N+ I      +R F++++++E   E  ISAK
Sbjct: 168  EPELTEEQLKMNDQLQEDELLALGYIYGGNMFIFDRHKDMRYFQVHVNVEATSEYNISAK 227

Query: 661  LLSSNGNAKLGMKSSSSLVTAECSNEFVYHFKVEHLPPIILRCLLPKSYPSHQPPYFTIA 840
            L       KL   SS        S +F+Y FK +HLPPI+L CLLP +YPSH PPYF I+
Sbjct: 228  L-------KLQADSSKE------SEDFLYSFKAQHLPPIVLTCLLPNAYPSHLPPYFLIS 274

Query: 841  IQWLDSQRISNLCIMLDSLWTDQPGQEVIYQWVEWLQSSSLSYLGINKELVLGPLYMPHS 1020
            +QW++  +IS+LC MLDS+W +QPGQEV+Y W +WLQ+SS+S+LG +KE+ LGP  +  S
Sbjct: 275  VQWMNPDKISSLCSMLDSIWMEQPGQEVLYLWTDWLQNSSISHLGFDKEIFLGPYGVTCS 334

Query: 1021 GDRRAVSKSVSPEVDIPSMMNYNDDKCHEVFRQNLHECCICFGEHAGTEFIRLPCKHFYC 1200
             D+RAVS S SP+ DIP + +Y+D+K HE F Q+LHECCICF E AG +F++LPC+HF+C
Sbjct: 335  RDKRAVSGSRSPDSDIPYIRSYDDEKRHESFLQSLHECCICFTESAGIDFVKLPCQHFFC 394

Query: 1201 WKCMEAYSSIHVKEGTINKLLCPDAKCGGMVPPGLLKHLLGDENYERWESLLLQKTLASM 1380
             KCM+ Y+ IHV EGT+NKL+CPD+KCG +VPPG+LK LLG+E YERWE+L+LQKTL SM
Sbjct: 395  LKCMKTYTDIHVSEGTVNKLMCPDSKCGEIVPPGILKRLLGEEAYERWETLMLQKTLESM 454

Query: 1381 SDVVYCPRCETACLEDEDHHGQCSKCLYSFCSLCGDRRHVGTTCMSPELKLLLLQARQGS 1560
            +DV YCPRCET C+EDE+    C KC +SFC+LC ++RHVG  CMSPEL+L +LQ RQGS
Sbjct: 455  TDVAYCPRCETPCIEDEEQLALCFKCYFSFCTLCKEKRHVGVACMSPELRLQILQERQGS 514

Query: 1561 FQLKEDQRRKEQEIINDILSVREIFRDAKQCPSCKMAISRTEGCNKMVCENCGKFFCYRC 1740
             +L E+QRRKE+E+IN+I+SV+ I + AKQCPSCK+AISRT GCNKMVC NCG++FCYRC
Sbjct: 515  SRLGEEQRRKEKEMINEIMSVKVIMKSAKQCPSCKIAISRTGGCNKMVCNNCGQYFCYRC 574

Query: 1741 NKAIDGYEHFRQDGCELFPREEIQQWEERMNGRQLVGQIQAELYAAH------GHSCPLC 1902
            NKAI GYEHFR+  C+LFP+E IQ+W ERMN RQ++GQIQA+L+A H      G  CP C
Sbjct: 575  NKAITGYEHFREGTCDLFPQEAIQEWNERMNERQVIGQIQAQLFAQHGQFPQRGQLCPNC 634

Query: 1903 GQMNAKVGNNNHIFCWSCQNHYCYLCQKKVKRSSQHYGPKGCKQHTVG 2046
             Q NAK GNNNH+FCW+CQ H+CYLC+K VK+S+QHYGPKGCKQHT G
Sbjct: 635  RQFNAKAGNNNHLFCWACQAHFCYLCKKVVKKSAQHYGPKGCKQHTDG 682


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