BLASTX nr result

ID: Coptis23_contig00007745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007745
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE65727.1| hypothetical protein OsJ_21368 [Oryza sativa Japo...    63   3e-08
gb|EEC68447.1| hypothetical protein OsI_36657 [Oryza sativa Indi...    63   3e-08
dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana]            61   8e-08
ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana] ...    59   5e-07
dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidop...    59   5e-07

>gb|EEE65727.1| hypothetical protein OsJ_21368 [Oryza sativa Japonica Group]
          Length = 1038

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/100 (33%), Positives = 56/100 (56%)
 Frame = -1

Query: 307 FEDLGEYNHVRKNGPWLVQGLVIVLRKWEGTEDLAINPALDFVKFWVQIYGIPADRMNEE 128
           F + G+Y  V + GPWL +G  I++ +++G  + ++ P LD V  WV++Y +P   MN+ 
Sbjct: 142 FSNEGDYLFVLQGGPWLHRGDAILVAEFDGLTNPSMVP-LDTVPIWVRVYDLPLVMMNKA 200

Query: 127 NVEKVGQSLGKVKHIDLTCSAEFRVPVARVRVKLDVKERL 8
             +  G  +GKV+ +D+      R    R+RV L V + L
Sbjct: 201 RGDLYGSKIGKVREVDVDAFGSNRHDFFRIRVDLPVNKPL 240


>gb|EEC68447.1| hypothetical protein OsI_36657 [Oryza sativa Indica Group]
          Length = 332

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/100 (34%), Positives = 54/100 (54%)
 Frame = -1

Query: 307 FEDLGEYNHVRKNGPWLVQGLVIVLRKWEGTEDLAINPALDFVKFWVQIYGIPADRMNEE 128
           F   G+YN V + GPWL +G  +++ K++G    ++ P L+FV  WV+IY +P   M + 
Sbjct: 156 FSSEGDYNFVLQGGPWLHRGDALLVAKFDGLTSPSMVP-LEFVPIWVRIYDLPLVLMTKR 214

Query: 127 NVEKVGQSLGKVKHIDLTCSAEFRVPVARVRVKLDVKERL 8
             E  G  LG V+ +D+      +    R+ V L VK+ L
Sbjct: 215 RGELYGSKLGHVREVDVGEDGRNKHDFFRILVDLSVKKPL 254


>dbj|BAF01072.1| hypothetical protein [Arabidopsis thaliana]
          Length = 224

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/91 (30%), Positives = 49/91 (53%)
 Frame = -1

Query: 280 VRKNGPWLVQGLVIVLRKWEGTEDLAINPALDFVKFWVQIYGIPADRMNEENVEKVGQSL 101
           V + GPW     +++L++W  T      P ++F+ FW+QI GIP   +  E +  VG++L
Sbjct: 52  VMRRGPWAFNDRMLILQRWFPTNQ----PLINFIPFWIQIRGIPYHYLTREVIAHVGRAL 107

Query: 100 GKVKHIDLTCSAEFRVPVARVRVKLDVKERL 8
           G +  +D       RV   RV+V  ++++ L
Sbjct: 108 GNLMEVDFGLETAARVDYVRVQVNWNIEDPL 138


>ref|NP_189728.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332644154|gb|AEE77675.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 336

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%)
 Frame = -1

Query: 280 VRKNGPWLVQGLVIVLRKWEGTEDLAINPALDFVKFWVQIYGIPADRMNEENVEKVGQSL 101
           V + GPW     +I+L++WE        P   F+ FWVQI GIP   +N   VE +G++L
Sbjct: 186 VLRRGPWAFNDWMILLQRWEPQI-----PLFPFIPFWVQIRGIPFQFLNRGVVEHIGRAL 240

Query: 100 GKVKHIDLTCSAEFRVPVARVRVKLDVKERL 8
           G+V   D       R+  ARV +  D+   L
Sbjct: 241 GQVLDTDFNVEVVARMDFARVLLHWDITHPL 271


>dbj|BAA97081.1| Ta11 non-LTR retroelement protein-like [Arabidopsis thaliana]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/91 (35%), Positives = 46/91 (50%)
 Frame = -1

Query: 280 VRKNGPWLVQGLVIVLRKWEGTEDLAINPALDFVKFWVQIYGIPADRMNEENVEKVGQSL 101
           V + GPW     +I+L++WE        P   F+ FWVQI GIP   +N   VE +G++L
Sbjct: 91  VLRRGPWAFNDWMILLQRWEPQI-----PLFPFIPFWVQIRGIPFQFLNRGVVEHIGRAL 145

Query: 100 GKVKHIDLTCSAEFRVPVARVRVKLDVKERL 8
           G+V   D       R+  ARV +  D+   L
Sbjct: 146 GQVLDTDFNVEVVARMDFARVLLHWDITHPL 176


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