BLASTX nr result

ID: Coptis23_contig00007717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007717
         (2090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/...   749   0.0  
emb|CBI29762.3| unnamed protein product [Vitis vinifera]              749   0.0  
gb|ABK95478.1| unknown [Populus trichocarpa]                          705   0.0  
ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ri...   701   0.0  
ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|2...   698   0.0  

>ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/phosphomethylpyrimidine
            kinase 2-like [Vitis vinifera]
          Length = 681

 Score =  749 bits (1934), Expect = 0.0
 Identities = 377/496 (76%), Positives = 428/496 (86%)
 Frame = -3

Query: 1950 KVAHVLSVAXXXXXXXXXXXXXIKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVY 1771
            K+ HVL+VA             +KACA+ GVYCSTVITAVTAQNT+GVQGV+ VPEDFV 
Sbjct: 186  KIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTVGVQGVNIVPEDFVA 245

Query: 1770 EQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPSI 1591
            EQLKSVLSDMHVDVVKTGMLP+IG+VK+L HSLKEFPVQALVVDPVMVSTSG +LA PSI
Sbjct: 246  EQLKSVLSDMHVDVVKTGMLPTIGIVKVLHHSLKEFPVQALVVDPVMVSTSGDVLAGPSI 305

Query: 1590 LMAFREELLPMADIVTPNLKEASALLGGMKLETVADMCSAAKSIHDLGPRYVLVKGGDLP 1411
            L AFREELLPMADIVTPNLKEASALLGG++LETV+DMC+AAK IHD+GPR VLVKGGDLP
Sbjct: 306  LAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVLVKGGDLP 365

Query: 1410 APLDAVDIFFDGDHCHELRALRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQVAKRFV 1231
            + LDAVDIFFDGD  +ELR+ RI+T NTHGTGCTLASCIAAELAKGS +L AV+ AK ++
Sbjct: 366  SSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAVKAAKHYI 425

Query: 1230 ETALDYSKDIVIGSGPQGPFDHLFKLKHSTYNSSRRRGFNPNDLLLYAITDSGMNKKWAR 1051
            ETALDYSKDI IG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSGMNKKW R
Sbjct: 426  ETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSGMNKKWGR 485

Query: 1050 SIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDIALACD 871
            SI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+D+ALACD
Sbjct: 486  SITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRIDVALACD 545

Query: 870  ADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPTSTKAN 691
            ADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+PT+TKAN
Sbjct: 546  ADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVYPTNTKAN 605

Query: 690  NLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRESVSSE 511
            N+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFDRE V +E
Sbjct: 606  NITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFDRECVLTE 665

Query: 510  TRKLHSVLMDVLSVAK 463
            T+KLH  L    ++ K
Sbjct: 666  TQKLHGDLTQAAAMVK 681


>emb|CBI29762.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  749 bits (1934), Expect = 0.0
 Identities = 377/496 (76%), Positives = 428/496 (86%)
 Frame = -3

Query: 1950 KVAHVLSVAXXXXXXXXXXXXXIKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVY 1771
            K+ HVL+VA             +KACA+ GVYCSTVITAVTAQNT+GVQGV+ VPEDFV 
Sbjct: 2    KIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTVGVQGVNIVPEDFVA 61

Query: 1770 EQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPSI 1591
            EQLKSVLSDMHVDVVKTGMLP+IG+VK+L HSLKEFPVQALVVDPVMVSTSG +LA PSI
Sbjct: 62   EQLKSVLSDMHVDVVKTGMLPTIGIVKVLHHSLKEFPVQALVVDPVMVSTSGDVLAGPSI 121

Query: 1590 LMAFREELLPMADIVTPNLKEASALLGGMKLETVADMCSAAKSIHDLGPRYVLVKGGDLP 1411
            L AFREELLPMADIVTPNLKEASALLGG++LETV+DMC+AAK IHD+GPR VLVKGGDLP
Sbjct: 122  LAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVLVKGGDLP 181

Query: 1410 APLDAVDIFFDGDHCHELRALRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQVAKRFV 1231
            + LDAVDIFFDGD  +ELR+ RI+T NTHGTGCTLASCIAAELAKGS +L AV+ AK ++
Sbjct: 182  SSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAVKAAKHYI 241

Query: 1230 ETALDYSKDIVIGSGPQGPFDHLFKLKHSTYNSSRRRGFNPNDLLLYAITDSGMNKKWAR 1051
            ETALDYSKDI IG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSGMNKKW R
Sbjct: 242  ETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSGMNKKWGR 301

Query: 1050 SIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDIALACD 871
            SI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+D+ALACD
Sbjct: 302  SITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRIDVALACD 361

Query: 870  ADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPTSTKAN 691
            ADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+PT+TKAN
Sbjct: 362  ADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVYPTNTKAN 421

Query: 690  NLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRESVSSE 511
            N+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFDRE V +E
Sbjct: 422  NITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFDRECVLTE 481

Query: 510  TRKLHSVLMDVLSVAK 463
            T+KLH  L    ++ K
Sbjct: 482  TQKLHGDLTQAAAMVK 497


>gb|ABK95478.1| unknown [Populus trichocarpa]
          Length = 531

 Score =  705 bits (1820), Expect = 0.0
 Identities = 362/521 (69%), Positives = 431/521 (82%)
 Frame = -3

Query: 2034 LSHPFSFNFQSTVNLRTSWVKVTAMANHKVAHVLSVAXXXXXXXXXXXXXIKACASLGVY 1855
            LS+ FSF +Q  + + +   +    A+  + HVLSVA             +KACA+ GVY
Sbjct: 8    LSNSFSF-YQKRIVMSSRMQEKNGGAS--IPHVLSVAGSDSGAGAGIQADLKACAARGVY 64

Query: 1854 CSTVITAVTAQNTLGVQGVHGVPEDFVYEQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHS 1675
            CSTVIT+VTAQNT+GVQ VH VPEDFV +QLKSVLSDM VDVVKTGMLPS+GVVK+L  S
Sbjct: 65   CSTVITSVTAQNTVGVQAVHAVPEDFVAQQLKSVLSDMQVDVVKTGMLPSVGVVKVLLQS 124

Query: 1674 LKEFPVQALVVDPVMVSTSGHILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLE 1495
            L E  V+ALVVDPVMVSTSG +LA PSIL  FREELLP+A+IVTPN+KEASALLGG++LE
Sbjct: 125  LTELSVRALVVDPVMVSTSGDVLAGPSILSTFREELLPIANIVTPNIKEASALLGGIRLE 184

Query: 1494 TVADMCSAAKSIHDLGPRYVLVKGGDLPAPLDAVDIFFDGDHCHELRALRIQTHNTHGTG 1315
            TVADM +AA+ +H LGPR VLVKGGDLP  LDAVDIFF+G+H +ELR+ RI+T NTHGTG
Sbjct: 185  TVADMRNAAELLHALGPRNVLVKGGDLPDSLDAVDIFFNGEHFYELRSSRIKTRNTHGTG 244

Query: 1314 CTLASCIAAELAKGSLMLPAVQVAKRFVETALDYSKDIVIGSGPQGPFDHLFKLKHSTYN 1135
            CTLASCIAAELAKGS ML AV+VAKR+VETAL+YSKDI+IG+G QGPFDHL +LK  +++
Sbjct: 245  CTLASCIAAELAKGSPMLTAVRVAKRYVETALEYSKDILIGNGIQGPFDHLLRLKSGSHS 304

Query: 1134 SSRRRGFNPNDLLLYAITDSGMNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRL 955
              R+  FNP+DL LYA+TDSGMNKKW RS++DAV A+I+GGATI+QLR+KDA T++F+  
Sbjct: 305  FRRKDAFNPSDLFLYAVTDSGMNKKWGRSVVDAVAAAIQGGATIVQLRDKDAGTKDFLET 364

Query: 954  AEACLEICHSHGVALLINDRVDIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKT 775
            A++CL +C SHGV LLINDRVD+ALA DADGVH+GQSDMP  VARTLLGP KIIGVSCKT
Sbjct: 365  AKSCLAVCRSHGVPLLINDRVDVALASDADGVHVGQSDMPATVARTLLGPEKIIGVSCKT 424

Query: 774  PEQALQAWADGADYIGCGGVFPTSTKANNLTVGLSGLKTVCSASKVPVVAIGGIGLANAH 595
             EQA QAW  GADYIGCGGV+ T+TKANN T+GL GLKTVCSASK+PVVAIGGI  +NA 
Sbjct: 425  IEQAQQAWIGGADYIGCGGVYSTNTKANNPTIGLDGLKTVCSASKLPVVAIGGINASNAG 484

Query: 594  SVMEIGEPNLHGVAVVSALFDRESVSSETRKLHSVLMDVLS 472
            +VME+G PNL GVAVVSALFDRE+V +ET+KLH++LM+  S
Sbjct: 485  TVMEMGVPNLKGVAVVSALFDRENVLAETKKLHALLMEASS 525


>ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ricinus communis]
            gi|223529770|gb|EEF31708.1| phosphomethylpyrimidine
            kinase, putative [Ricinus communis]
          Length = 546

 Score =  701 bits (1810), Expect = 0.0
 Identities = 360/498 (72%), Positives = 406/498 (81%)
 Frame = -3

Query: 1965 AMANHKVAHVLSVAXXXXXXXXXXXXXIKACASLGVYCSTVITAVTAQNTLGVQGVHGVP 1786
            A AN K+ HVLSVA             +KACA+ GVYCSTVITAVTAQNT GVQGV  V 
Sbjct: 42   AAANKKIPHVLSVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVDIVR 101

Query: 1785 EDFVYEQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHIL 1606
             DFV EQLKSVLSDM VDVVKTGMLPSIG+VK+L  +L+EFPV+ALVVDPVMVSTSG +L
Sbjct: 102  NDFVAEQLKSVLSDMQVDVVKTGMLPSIGIVKILHQNLREFPVRALVVDPVMVSTSGDVL 161

Query: 1605 ADPSILMAFREELLPMADIVTPNLKEASALLGGMKLETVADMCSAAKSIHDLGPRYVLVK 1426
            A PSI+  FREELLPMA+IVTPN+KEASALLGGM LET+ADM SAAK +H LGP+ VLVK
Sbjct: 162  AGPSIVSCFREELLPMANIVTPNIKEASALLGGMPLETLADMRSAAKLLHALGPQNVLVK 221

Query: 1425 GGDLPAPLDAVDIFFDGDHCHELRALRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQV 1246
            GGDLP  LDAVDIFFDG+  HELR+ RI+T NTHGTGCTLASCIAAELAKGS ML AV+V
Sbjct: 222  GGDLPDSLDAVDIFFDGEDYHELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLSAVKV 281

Query: 1245 AKRFVETALDYSKDIVIGSGPQGPFDHLFKLKHSTYNSSRRRGFNPNDLLLYAITDSGMN 1066
            AK ++ETAL+YSKDI IG+G QGPFDHL +LK S  NS R+  FNPN+L LYA+ DS MN
Sbjct: 282  AKCYIETALEYSKDIFIGNGRQGPFDHLLRLKSSVQNSGRQGTFNPNNLFLYAVPDSRMN 341

Query: 1065 KKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDI 886
            K W R ++DA + +IEGGATI+QLREK+ ETR+F+  A+ACLEIC SHGV LLINDRVD+
Sbjct: 342  KMWGRPMVDATREAIEGGATIVQLREKNTETRDFINTAKACLEICRSHGVPLLINDRVDV 401

Query: 885  ALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPT 706
            ALACDADGVH+GQSD+P R AR LLGP KIIGVSCKTPEQA QAW DGADYIGCGGV+PT
Sbjct: 402  ALACDADGVHVGQSDIPARTARILLGPDKIIGVSCKTPEQAQQAWIDGADYIGCGGVYPT 461

Query: 705  STKANNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRE 526
            +TKANN TVG  GLK VC ASK+PVVAIGGI   NA SVME G  NL GVAVVSALFD+E
Sbjct: 462  TTKANNSTVGFDGLKAVCLASKLPVVAIGGINATNAVSVMESGVANLKGVAVVSALFDKE 521

Query: 525  SVSSETRKLHSVLMDVLS 472
            SV   TR LH++L +  S
Sbjct: 522  SVLDATRNLHAILTEAAS 539


>ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|222841488|gb|EEE79035.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  698 bits (1802), Expect = 0.0
 Identities = 355/492 (72%), Positives = 415/492 (84%)
 Frame = -3

Query: 1947 VAHVLSVAXXXXXXXXXXXXXIKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVYE 1768
            V HVLSVA             +KAC++ GVYCSTVIT+VTAQNT+GVQ VH VPEDFV +
Sbjct: 10   VPHVLSVAGSDSGAGAGIQADLKACSARGVYCSTVITSVTAQNTVGVQAVHAVPEDFVAQ 69

Query: 1767 QLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPSIL 1588
            QLKSVLSDM VDVVKTGMLPS+GVVK+L  SL E  V+ALVVDPVMVSTSG +LA PSIL
Sbjct: 70   QLKSVLSDMQVDVVKTGMLPSVGVVKVLLQSLTELSVRALVVDPVMVSTSGDVLAGPSIL 129

Query: 1587 MAFREELLPMADIVTPNLKEASALLGGMKLETVADMCSAAKSIHDLGPRYVLVKGGDLPA 1408
              FREELLPMA+IVTPN+KEASALLGG++LETVADM +AA+ +H LGPR VLVKGGDLP 
Sbjct: 130  STFREELLPMANIVTPNIKEASALLGGIRLETVADMRNAAELLHALGPRNVLVKGGDLPD 189

Query: 1407 PLDAVDIFFDGDHCHELRALRIQTHNTHGTGCTLASCIAAELAKGSLMLPAVQVAKRFVE 1228
             LDAVDIFF+G+H +ELR+ RI+T NTHGTGCTLASCIAAELAKGS ML AV+VAKR+VE
Sbjct: 190  SLDAVDIFFNGEHFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLTAVRVAKRYVE 249

Query: 1227 TALDYSKDIVIGSGPQGPFDHLFKLKHSTYNSSRRRGFNPNDLLLYAITDSGMNKKWARS 1048
            TAL+YSKDI+IG+G QGPFDHL +LK  +++  R+  FNP+DL LYA+TDSGMNKKW RS
Sbjct: 250  TALEYSKDILIGNGIQGPFDHLLRLKSGSHSFHRKDAFNPSDLFLYAVTDSGMNKKWGRS 309

Query: 1047 IIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRVDIALACDA 868
             +DAV A+I+GGATI+QLR+KDA T++F+  A++CL +C SHGV LLIND VD+ALA DA
Sbjct: 310  TVDAVAAAIQGGATIVQLRDKDAGTKDFLETAKSCLAVCRSHGVPLLINDCVDVALASDA 369

Query: 867  DGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVFPTSTKANN 688
            DGVH+GQSDMP  VARTLLGP KIIGVSCKT EQA QAW  GADYIGCGGV+ T+TKANN
Sbjct: 370  DGVHVGQSDMPATVARTLLGPEKIIGVSCKTIEQAQQAWIGGADYIGCGGVYSTNTKANN 429

Query: 687  LTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFDRESVSSET 508
             T+GL GLKTVCSASK+PVVAIGGI  +NA +VME+G PNL GVAVVSALFDRE+V +ET
Sbjct: 430  PTIGLDGLKTVCSASKLPVVAIGGINDSNAGTVMEMGVPNLKGVAVVSALFDRENVLAET 489

Query: 507  RKLHSVLMDVLS 472
            +KLH++LM+  S
Sbjct: 490  KKLHALLMEASS 501


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