BLASTX nr result

ID: Coptis23_contig00007714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007714
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001142100.1| malate dehydrogenase2 [Zea mays] gi|19470711...   358   1e-96
ref|XP_002441555.1| hypothetical protein SORBIDRAFT_09g029240 [S...   356   4e-96
ref|XP_002456051.1| hypothetical protein SORBIDRAFT_03g029570 [S...   356   5e-96
ref|NP_001056389.1| Os05g0574400 [Oryza sativa Japonica Group] g...   356   5e-96
ref|XP_003569456.1| PREDICTED: malate dehydrogenase 1, mitochond...   355   6e-96

>ref|NP_001142100.1| malate dehydrogenase2 [Zea mays] gi|194707114|gb|ACF87641.1|
           unknown [Zea mays] gi|413946626|gb|AFW79275.1| malate
           dehydrogenase2 [Zea mays]
          Length = 340

 Score =  358 bits (918), Expect = 1e-96
 Identities = 183/221 (82%), Positives = 196/221 (88%)
 Frame = -2

Query: 920 NINAGIVKGLCIAIAKYCPNAVINMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 741
           NINAGIVKGLC AIAK+CPNA++NMISNPVNSTVPIAAEVFKKAGTYD+KKLFGVTTLDV
Sbjct: 117 NINAGIVKGLCTAIAKHCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDV 176

Query: 740 VRAKTFYXXXXXXXXXXXXXXXXGGHAGITILPLFSQATPKGSNLSDEEITALTKRTQDG 561
           VRAKTFY                GGHAGITILPLFSQATP  ++LS E+I ALTKRTQDG
Sbjct: 177 VRAKTFYAGKAGVPVTGVNVPVVGGHAGITILPLFSQATPASNSLSQEDIEALTKRTQDG 236

Query: 560 GTEVVNAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSYVQSTITDLPFFASKVR 381
           GTEVV AKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECS+VQST+T+LPFFASKVR
Sbjct: 237 GTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSFVQSTVTELPFFASKVR 296

Query: 380 LGKNGVEEVLGLGNLTDFEKQGLENLKSELKSSIDKGIEFA 258
           LGKNGVEEVLGLG L +FEK+GLENLK ELKSSIDKGI+FA
Sbjct: 297 LGKNGVEEVLGLGELNEFEKKGLENLKGELKSSIDKGIKFA 337


>ref|XP_002441555.1| hypothetical protein SORBIDRAFT_09g029240 [Sorghum bicolor]
           gi|241946840|gb|EES19985.1| hypothetical protein
           SORBIDRAFT_09g029240 [Sorghum bicolor]
          Length = 340

 Score =  356 bits (914), Expect = 4e-96
 Identities = 181/221 (81%), Positives = 195/221 (88%)
 Frame = -2

Query: 920 NINAGIVKGLCIAIAKYCPNAVINMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 741
           NINAGIVKGLC AIAK+CPNA++NMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV
Sbjct: 117 NINAGIVKGLCTAIAKHCPNALVNMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 176

Query: 740 VRAKTFYXXXXXXXXXXXXXXXXGGHAGITILPLFSQATPKGSNLSDEEITALTKRTQDG 561
           VRAKTFY                GGHAGITILPLFSQATP  ++LS E+I ALTKRTQDG
Sbjct: 177 VRAKTFYAGKAGVPVTEVNVPVVGGHAGITILPLFSQATPASNSLSQEDIEALTKRTQDG 236

Query: 560 GTEVVNAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSYVQSTITDLPFFASKVR 381
           GTEVV AKAGKGSATLSMAYAGAVFADACLKGLNGVPD+VECS+VQST+T+LPFFASKVR
Sbjct: 237 GTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDVVECSFVQSTVTELPFFASKVR 296

Query: 380 LGKNGVEEVLGLGNLTDFEKQGLENLKSELKSSIDKGIEFA 258
           LGKNGVEEVLGLG L DFEK+GLENLK EL SSI+KG++FA
Sbjct: 297 LGKNGVEEVLGLGELNDFEKKGLENLKGELMSSIEKGVKFA 337


>ref|XP_002456051.1| hypothetical protein SORBIDRAFT_03g029570 [Sorghum bicolor]
           gi|241928026|gb|EES01171.1| hypothetical protein
           SORBIDRAFT_03g029570 [Sorghum bicolor]
          Length = 340

 Score =  356 bits (913), Expect = 5e-96
 Identities = 183/223 (82%), Positives = 198/223 (88%)
 Frame = -2

Query: 920 NINAGIVKGLCIAIAKYCPNAVINMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 741
           NINAGIVK L  AIAKYCPNA++NMISNPVNSTVPIAAEVFKKAGTYD+KKLFGVTTLDV
Sbjct: 117 NINAGIVKNLSAAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDV 176

Query: 740 VRAKTFYXXXXXXXXXXXXXXXXGGHAGITILPLFSQATPKGSNLSDEEITALTKRTQDG 561
           VRAKTFY                GGHAGITILPLFSQATP  ++LSDE+I ALTKRTQDG
Sbjct: 177 VRAKTFYAGKANLPVTDVNVPVVGGHAGITILPLFSQATPATNSLSDEDIKALTKRTQDG 236

Query: 560 GTEVVNAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSYVQSTITDLPFFASKVR 381
           GTEVV AKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECS+VQST+T+LPFFASKVR
Sbjct: 237 GTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSFVQSTVTELPFFASKVR 296

Query: 380 LGKNGVEEVLGLGNLTDFEKQGLENLKSELKSSIDKGIEFASK 252
           LGKNGVEEVLGLG L+DFEK+GLE LKSELKSSI+KGI+FA++
Sbjct: 297 LGKNGVEEVLGLGELSDFEKEGLEKLKSELKSSIEKGIKFANE 339


>ref|NP_001056389.1| Os05g0574400 [Oryza sativa Japonica Group]
           gi|50080249|gb|AAT69584.1| putative malate dehydrogenase
           [Oryza sativa Japonica Group] gi|52353548|gb|AAU44114.1|
           putative malate dehydrogenase [Oryza sativa Japonica
           Group] gi|113579940|dbj|BAF18303.1| Os05g0574400 [Oryza
           sativa Japonica Group] gi|125553415|gb|EAY99124.1|
           hypothetical protein OsI_21084 [Oryza sativa Indica
           Group] gi|222632646|gb|EEE64778.1| hypothetical protein
           OsJ_19634 [Oryza sativa Japonica Group]
          Length = 340

 Score =  356 bits (913), Expect = 5e-96
 Identities = 181/221 (81%), Positives = 196/221 (88%)
 Frame = -2

Query: 920 NINAGIVKGLCIAIAKYCPNAVINMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 741
           NINAGIVKGLC AI+KYCPNA++NMISNPVNSTVPIAAEVFKKAGTYD+KKLFGVTTLDV
Sbjct: 117 NINAGIVKGLCTAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDV 176

Query: 740 VRAKTFYXXXXXXXXXXXXXXXXGGHAGITILPLFSQATPKGSNLSDEEITALTKRTQDG 561
           VRAKTFY                GGHAGITILPLFSQATP  + LS E+I ALTKRTQDG
Sbjct: 177 VRAKTFYAGKANVPVTEVNVPVVGGHAGITILPLFSQATPASNALSHEDIKALTKRTQDG 236

Query: 560 GTEVVNAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSYVQSTITDLPFFASKVR 381
           GTEVV AKAGKGSATLSMAYAGAVFADACLKGLNGVPD+VECS+VQST+T+LPFFASKVR
Sbjct: 237 GTEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDVVECSFVQSTVTELPFFASKVR 296

Query: 380 LGKNGVEEVLGLGNLTDFEKQGLENLKSELKSSIDKGIEFA 258
           LGKNGVEEVLGLG L++FEK+GLENLK ELKSSI+KGI+FA
Sbjct: 297 LGKNGVEEVLGLGQLSEFEKEGLENLKGELKSSIEKGIKFA 337


>ref|XP_003569456.1| PREDICTED: malate dehydrogenase 1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 340

 Score =  355 bits (912), Expect = 6e-96
 Identities = 184/222 (82%), Positives = 195/222 (87%)
 Frame = -2

Query: 920 NINAGIVKGLCIAIAKYCPNAVINMISNPVNSTVPIAAEVFKKAGTYDKKKLFGVTTLDV 741
           NINAGIVK LC AIAKYCPNA+INMISNPVNSTVPIAAEVFKKAGTYD+K+LFGVTTLDV
Sbjct: 117 NINAGIVKNLCTAIAKYCPNALINMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDV 176

Query: 740 VRAKTFYXXXXXXXXXXXXXXXXGGHAGITILPLFSQATPKGSNLSDEEITALTKRTQDG 561
           VRAKTFY                GGHAGITILPLFSQATP  + LS EEI ALTKRTQDG
Sbjct: 177 VRAKTFYAGKANVPVTGVNVPVVGGHAGITILPLFSQATPASNALSAEEIKALTKRTQDG 236

Query: 560 GTEVVNAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSYVQSTITDLPFFASKVR 381
           GTEVV AKAGKGSATLSMAYAGAVF DACLKGLNGVPDIVECSYVQSTIT+LPFFASKVR
Sbjct: 237 GTEVVEAKAGKGSATLSMAYAGAVFGDACLKGLNGVPDIVECSYVQSTITELPFFASKVR 296

Query: 380 LGKNGVEEVLGLGNLTDFEKQGLENLKSELKSSIDKGIEFAS 255
           LGKNGVEEVLGLG L+DFEK+GLE+LK ELKSSI+KGI+FA+
Sbjct: 297 LGKNGVEEVLGLGQLSDFEKEGLESLKGELKSSIEKGIKFAN 338


Top