BLASTX nr result

ID: Coptis23_contig00007710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007710
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35803.3| unnamed protein product [Vitis vinifera]              379   e-103
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...   377   e-102
ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|2...   365   1e-98
ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816...   337   3e-90
ref|XP_002516200.1| DNA binding protein, putative [Ricinus commu...   337   3e-90

>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  379 bits (974), Expect = e-103
 Identities = 190/293 (64%), Positives = 222/293 (75%)
 Frame = -1

Query: 881 MLNAQVSQKNTCSLLAVLCGKSTDLNQKQNFVKEDGTRYPFPELVSSGRLEVQTLRNPTT 702
           ML+ Q    +TC LLAV CGK+++  Q+      D  RYPFP+ VSSGRLEVQTL +P+ 
Sbjct: 1   MLHTQGISNHTCGLLAVTCGKTSECKQEHE-TSNDRPRYPFPDFVSSGRLEVQTLTSPSP 59

Query: 701 DEFQQVLESTRPNIIYLQGQQLPNDEEVGSLVWNGIHLSTAEAICGLFGSTLPDVVYLEL 522
           DEF++V ES +PN +Y QG+QL NDE VGSLVW G+ LS+AE ICGLFGS LP  VYLE+
Sbjct: 60  DEFRRVFESVQPNFVYFQGEQLQNDE-VGSLVWGGVELSSAEDICGLFGSKLPTTVYLEI 118

Query: 521 PNGEKLAEALCHKGVPYVIYWKNAFSCYSACHFRQTLLSVIQSSCTHTWDAFQLAHASFT 342
           PNGEKLAEAL  KG+PYVIYWKNAFSCY+ACHFR  L SV+QSS THTWDAFQLA+ASF 
Sbjct: 119 PNGEKLAEALHSKGIPYVIYWKNAFSCYAACHFRNALFSVVQSSSTHTWDAFQLAYASFR 178

Query: 341 LYCVQNNDILPDNCQKASRNLGPVLLGNPPKDSVYPVEKVVNGEIEDDQELSGTQPAIQI 162
           LYCV+NN +LP N  K S  LGP LLG+P    V P E       ED++   GT PAI+I
Sbjct: 179 LYCVRNNHVLPANSHKVSGKLGPRLLGDPATIDVPPPEVDAG---EDEEGSLGTLPAIKI 235

Query: 161 HDDDVSLKFLVCGVPSTLDACLFGSLEDGLNALLKIEIRGSKLNTRVSAPPPP 3
           +DDDV ++FLVCG P  LD+CLF SLEDGLNALL IEIRGSKL+ RVSAPPPP
Sbjct: 236 YDDDVGIRFLVCGEPCMLDSCLFESLEDGLNALLSIEIRGSKLHNRVSAPPPP 288


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
           vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
           product [Vitis vinifera]
          Length = 739

 Score =  377 bits (969), Expect = e-102
 Identities = 189/293 (64%), Positives = 221/293 (75%)
 Frame = -1

Query: 881 MLNAQVSQKNTCSLLAVLCGKSTDLNQKQNFVKEDGTRYPFPELVSSGRLEVQTLRNPTT 702
           M + Q + +N C+LLAV+CGK      +Q         YPFPELVSSGRLEVQ L+NP+ 
Sbjct: 1   MFHVQAASRNHCALLAVVCGKIPVSEDQQQHP------YPFPELVSSGRLEVQILKNPSI 54

Query: 701 DEFQQVLESTRPNIIYLQGQQLPNDEEVGSLVWNGIHLSTAEAICGLFGSTLPDVVYLEL 522
            EFQ+ LES  PN +YLQG+QLP  EE+GSL W G+ LS+AEA+  LFG TLP  VYLE 
Sbjct: 55  HEFQRSLESLEPNFLYLQGEQLPGSEEIGSLTWGGVDLSSAEALVELFGPTLPTTVYLET 114

Query: 521 PNGEKLAEALCHKGVPYVIYWKNAFSCYSACHFRQTLLSVIQSSCTHTWDAFQLAHASFT 342
           PNGEKLA+AL  KGV YVIYWKNAFSCY+ACHFRQ L SV+QSSC+HTWDAFQLAHASF 
Sbjct: 115 PNGEKLAKALHSKGVSYVIYWKNAFSCYAACHFRQALFSVVQSSCSHTWDAFQLAHASFR 174

Query: 341 LYCVQNNDILPDNCQKASRNLGPVLLGNPPKDSVYPVEKVVNGEIEDDQELSGTQPAIQI 162
           LYCVQNN + P N QK S  LGP LLG+PPK +V P       E+++++ L  T P I+I
Sbjct: 175 LYCVQNNTV-PSNNQKVSGKLGPCLLGDPPKINVVP------PEVDEEESLPATLPVIKI 227

Query: 161 HDDDVSLKFLVCGVPSTLDACLFGSLEDGLNALLKIEIRGSKLNTRVSAPPPP 3
           +D DVS++FLVCG PS LDACL GSLEDGLNALL IEIRGSKL+ RVSAPPPP
Sbjct: 228 YDADVSMRFLVCGAPSALDACLLGSLEDGLNALLCIEIRGSKLHNRVSAPPPP 280


>ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|222865564|gb|EEF02695.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  365 bits (937), Expect = 1e-98
 Identities = 185/293 (63%), Positives = 222/293 (75%)
 Frame = -1

Query: 881 MLNAQVSQKNTCSLLAVLCGKSTDLNQKQNFVKEDGTRYPFPELVSSGRLEVQTLRNPTT 702
           M +AQ   +N C+LLAVLCGKS    +++  + +D  RYP PEL S+GRLEVQ L NP+T
Sbjct: 1   MFHAQGPLRNHCTLLAVLCGKS---GEQKLPLSDDKPRYPLPELESTGRLEVQVLNNPST 57

Query: 701 DEFQQVLESTRPNIIYLQGQQLPNDEEVGSLVWNGIHLSTAEAICGLFGSTLPDVVYLEL 522
           DEF+QVL+S  P+I+Y QG+Q+ + EE+GSL W  + LST E++CGLFGSTLP  VYLE+
Sbjct: 58  DEFRQVLQSLEPSIVYFQGEQVEDREEIGSLRWADVGLSTPESLCGLFGSTLPPTVYLEM 117

Query: 521 PNGEKLAEALCHKGVPYVIYWKNAFSCYSACHFRQTLLSVIQSSCTHTWDAFQLAHASFT 342
           PNGEKLAEAL  KGVPYVIYWK+AFSCY+A HFRQ LLSV+QSSC+HT DAFQLAHASF 
Sbjct: 118 PNGEKLAEALHSKGVPYVIYWKSAFSCYAASHFRQALLSVVQSSCSHTCDAFQLAHASFR 177

Query: 341 LYCVQNNDILPDNCQKASRNLGPVLLGNPPKDSVYPVEKVVNGEIEDDQELSGTQPAIQI 162
           LYCVQNN+    N QK     GP LLG+PPK  +   E    GE    +  SG  PAI+I
Sbjct: 178 LYCVQNNNTPASNSQKVGGKPGPRLLGDPPKFDISLPEADDQGE----EGSSGALPAIKI 233

Query: 161 HDDDVSLKFLVCGVPSTLDACLFGSLEDGLNALLKIEIRGSKLNTRVSAPPPP 3
           +DDDV+++FLVCG+  TLDAC  GSLEDGLNALL IEIRGSKL+ R SAPPPP
Sbjct: 234 YDDDVTMRFLVCGLTGTLDACALGSLEDGLNALLNIEIRGSKLHNRTSAPPPP 286


>ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816540 [Glycine max]
          Length = 782

 Score =  337 bits (864), Expect = 3e-90
 Identities = 173/291 (59%), Positives = 214/291 (73%)
 Frame = -1

Query: 875 NAQVSQKNTCSLLAVLCGKSTDLNQKQNFVKEDGTRYPFPELVSSGRLEVQTLRNPTTDE 696
           ++Q + K+TC+LLAV C  S+     ++ +      YPFPELVS+GRLEVQTL +P  ++
Sbjct: 5   HSQGTPKHTCTLLAVTCRTSS----AEHKLSHAQRTYPFPELVSAGRLEVQTLCSPEKEQ 60

Query: 695 FQQVLESTRPNIIYLQGQQLPNDEEVGSLVWNGIHLSTAEAICGLFGSTLPDVVYLELPN 516
           F++VLES +PN +YL+G QL N E VGSLVW G+ LST E I  LFGSTLP  VYLE+PN
Sbjct: 61  FRKVLESFQPNFVYLRGDQLENGE-VGSLVWQGVELSTCEDITELFGSTLPTAVYLEIPN 119

Query: 515 GEKLAEALCHKGVPYVIYWKNAFSCYSACHFRQTLLSVIQSSCTHTWDAFQLAHASFTLY 336
           GE  AEAL  KG+PYVI+WKN FSCY+ACHFRQ  LSV+QSS THTWDAF LA ASF LY
Sbjct: 120 GESFAEALHLKGIPYVIFWKNTFSCYAACHFRQAFLSVVQSSSTHTWDAFHLARASFELY 179

Query: 335 CVQNNDILPDNCQKASRNLGPVLLGNPPKDSVYPVEKVVNGEIEDDQELSGTQPAIQIHD 156
           CVQNN +LP +   AS  +GP LLG+  K +V P E     E +DD+  SG+ PAI+IH+
Sbjct: 180 CVQNNQVLPSDSDDASSEMGPHLLGDCLKINVDPPE---IDEEDDDESSSGSLPAIKIHE 236

Query: 155 DDVSLKFLVCGVPSTLDACLFGSLEDGLNALLKIEIRGSKLNTRVSAPPPP 3
           D+V+L+FL+CG PST+D  L  SLEDGL ALL IEIRG KL+ + SAPPPP
Sbjct: 237 DEVNLRFLICGAPSTVDESLLRSLEDGLRALLTIEIRGCKLHGKFSAPPPP 287


>ref|XP_002516200.1| DNA binding protein, putative [Ricinus communis]
           gi|223544686|gb|EEF46202.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 749

 Score =  337 bits (864), Expect = 3e-90
 Identities = 165/250 (66%), Positives = 199/250 (79%)
 Frame = -1

Query: 752 LVSSGRLEVQTLRNPTTDEFQQVLESTRPNIIYLQGQQLPNDEEVGSLVWNGIHLSTAEA 573
           L SSGRLEVQ L +P+TDEF++VL+S+ PNI+YLQG+ + + EE+GSL W G  LST +A
Sbjct: 43  LXSSGRLEVQILSSPSTDEFRRVLQSSEPNIVYLQGEIIEDSEEIGSLRWAGADLSTPDA 102

Query: 572 ICGLFGSTLPDVVYLELPNGEKLAEALCHKGVPYVIYWKNAFSCYSACHFRQTLLSVIQS 393
           +C LFGSTLP  VYLE+PNGEKLAEAL  KGVPYVIYWK+ FSCY+A HFRQ LLSV+QS
Sbjct: 103 LCELFGSTLPPTVYLEIPNGEKLAEALHFKGVPYVIYWKSTFSCYAAAHFRQALLSVVQS 162

Query: 392 SCTHTWDAFQLAHASFTLYCVQNNDILPDNCQKASRNLGPVLLGNPPKDSVYPVEKVVNG 213
           SC+HT DAFQLAHASF+LYCV+NN  L  N QK     GP LLG PPK  +     +   
Sbjct: 163 SCSHTCDAFQLAHASFSLYCVRNNTGLSSNNQKVGGKPGPRLLGEPPKIDI----TLPEA 218

Query: 212 EIEDDQELSGTQPAIQIHDDDVSLKFLVCGVPSTLDACLFGSLEDGLNALLKIEIRGSKL 33
           +++D++  SGT PAI+I+DDDV+++FLVC +PSTLDACL GSLEDGLNALL IEIRGSKL
Sbjct: 219 DVQDEESSSGTLPAIKIYDDDVTMRFLVCELPSTLDACLLGSLEDGLNALLNIEIRGSKL 278

Query: 32  NTRVSAPPPP 3
           + R SAPPPP
Sbjct: 279 HNRTSAPPPP 288


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