BLASTX nr result

ID: Coptis23_contig00007691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007691
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11402.2|ATPD_SPIOL RecName: Full=ATP synthase delta chain, c...   106   2e-21
gb|AAA34024.1| ATP synthase delta subunit precursor [Spinacia ol...   106   2e-21
sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, c...   102   3e-20
ref|XP_002325568.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002872455.1| hypothetical protein ARALYDRAFT_489817 [Arab...   100   1e-19

>sp|P11402.2|ATPD_SPIOL RecName: Full=ATP synthase delta chain, chloroplastic; AltName:
           Full=F-ATPase delta chain; Flags: Precursor
           gi|21240|emb|CAA43634.1| unnamed protein product
           [Spinacia oleracea]
          Length = 257

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -2

Query: 281 IAKGVQKLTGAINVRIKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEELASQLEFPDI 102
           IAKGVQK+TGA NVRIKTVIDPSLVAGFTIRYG+ GSKL+DMSVKKQLEE+A+QLE  D+
Sbjct: 194 IAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLEMDDV 253

Query: 101 SLAV 90
           +LAV
Sbjct: 254 TLAV 257


>gb|AAA34024.1| ATP synthase delta subunit precursor [Spinacia oleracea]
           gi|226262|prf||1503275A ATP synthase delta
          Length = 257

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/64 (82%), Positives = 60/64 (93%)
 Frame = -2

Query: 281 IAKGVQKLTGAINVRIKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEELASQLEFPDI 102
           IAKGVQK+TGA NVRIKTVIDPSLVAGFTIRYG+ GSKL+DMSVKKQLEE+A+QLE  D+
Sbjct: 194 IAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLEMDDV 253

Query: 101 SLAV 90
           +LAV
Sbjct: 254 TLAV 257


>sp|P32980.1|ATPD_TOBAC RecName: Full=ATP synthase delta chain, chloroplastic; AltName:
           Full=F-ATPase delta chain; Flags: Precursor
           gi|19787|emb|CAA45153.1| chloroplast ATP synthase (delta
           subunit) [Nicotiana tabacum]
          Length = 248

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/64 (82%), Positives = 59/64 (92%)
 Frame = -2

Query: 281 IAKGVQKLTGAINVRIKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEELASQLEFPDI 102
           IAKGVQ+LTG+ NVRIKTVID SLVAGFTIRYG+SGSKLIDMSVKKQLE++A+QLE  DI
Sbjct: 185 IAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLEIGDI 244

Query: 101 SLAV 90
            LAV
Sbjct: 245 QLAV 248


>ref|XP_002325568.1| predicted protein [Populus trichocarpa] gi|222862443|gb|EEE99949.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/63 (82%), Positives = 57/63 (90%)
 Frame = -2

Query: 281 IAKGVQKLTGAINVRIKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEELASQLEFPDI 102
           IAK VQKLTGA NVRIKTVIDPSLVAGFT+RYGSSGSK+IDMSVKKQLEE+ +QL+  DI
Sbjct: 189 IAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGSSGSKMIDMSVKKQLEEITAQLDLSDI 248

Query: 101 SLA 93
            LA
Sbjct: 249 ELA 251


>ref|XP_002872455.1| hypothetical protein ARALYDRAFT_489817 [Arabidopsis lyrata subsp.
           lyrata] gi|297318292|gb|EFH48714.1| hypothetical protein
           ARALYDRAFT_489817 [Arabidopsis lyrata subsp. lyrata]
          Length = 233

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -2

Query: 281 IAKGVQKLTGAINVRIKTVIDPSLVAGFTIRYGSSGSKLIDMSVKKQLEELASQLEFPDI 102
           IAK VQKLTGA NVR+KTVIDPSLVAGFTIRYG SGSKLIDMSVKKQLE++A QLE  +I
Sbjct: 170 IAKQVQKLTGAKNVRVKTVIDPSLVAGFTIRYGDSGSKLIDMSVKKQLEDIAQQLELGEI 229

Query: 101 SLA 93
            LA
Sbjct: 230 QLA 232


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