BLASTX nr result

ID: Coptis23_contig00007675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007675
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322623.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|XP_002308884.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
ref|XP_004162636.1| PREDICTED: ferredoxin-dependent glutamate sy...   241   3e-62
ref|XP_004136778.1| PREDICTED: ferredoxin-dependent glutamate sy...   241   3e-62
emb|CBI30117.3| unnamed protein product [Vitis vinifera]              241   5e-62

>ref|XP_002322623.1| predicted protein [Populus trichocarpa] gi|222867253|gb|EEF04384.1|
            predicted protein [Populus trichocarpa]
          Length = 1491

 Score =  242 bits (618), Expect = 2e-62
 Identities = 116/124 (93%), Positives = 121/124 (97%)
 Frame = +1

Query: 1    DYVGKGMAGGELVVTPVETTGFVPEEATIVGNTCLYGATGGQVFIRGKAGERFAVRNSLA 180
            DYVGKGMAGGELVVTPVE TGFVPE+A IVGNTCLYGATGGQVF+RGKAGERFAVRNSLA
Sbjct: 1299 DYVGKGMAGGELVVTPVENTGFVPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLA 1358

Query: 181  QAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 360
            QAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYILDEDDTL+PKVNKEIVK+Q
Sbjct: 1359 QAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDDTLMPKVNKEIVKVQ 1418

Query: 361  RVNA 372
            RV A
Sbjct: 1419 RVTA 1422


>ref|XP_002308884.1| predicted protein [Populus trichocarpa] gi|222854860|gb|EEE92407.1|
            predicted protein [Populus trichocarpa]
          Length = 1628

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/124 (92%), Positives = 122/124 (98%)
 Frame = +1

Query: 1    DYVGKGMAGGELVVTPVETTGFVPEEATIVGNTCLYGATGGQVFIRGKAGERFAVRNSLA 180
            DYVGKGMAGGELVVTPVE TGFVPE+ATIVGNTCLYGATGGQVF+RGKAGERFAVRNSLA
Sbjct: 1436 DYVGKGMAGGELVVTPVENTGFVPEDATIVGNTCLYGATGGQVFVRGKAGERFAVRNSLA 1495

Query: 181  QAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 360
            +AVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAY+LDEDDTL+PKVNKEIVK+Q
Sbjct: 1496 EAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYMLDEDDTLMPKVNKEIVKVQ 1555

Query: 361  RVNA 372
            RV A
Sbjct: 1556 RVTA 1559


>ref|XP_004162636.1| PREDICTED: ferredoxin-dependent glutamate synthase 1,
            chloroplastic-like [Cucumis sativus]
          Length = 856

 Score =  241 bits (616), Expect = 3e-62
 Identities = 116/124 (93%), Positives = 120/124 (96%)
 Frame = +1

Query: 1    DYVGKGMAGGELVVTPVETTGFVPEEATIVGNTCLYGATGGQVFIRGKAGERFAVRNSLA 180
            DYVGKGMAGGELVVTP E TGFVPE+A IVGNTCLYGATGGQ+F+RGKAGERFAVRNSLA
Sbjct: 665  DYVGKGMAGGELVVTPTEITGFVPEDAAIVGNTCLYGATGGQIFVRGKAGERFAVRNSLA 724

Query: 181  QAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 360
            QAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ
Sbjct: 725  QAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 784

Query: 361  RVNA 372
            RV A
Sbjct: 785  RVTA 788


>ref|XP_004136778.1| PREDICTED: ferredoxin-dependent glutamate synthase 1,
            chloroplastic-like [Cucumis sativus]
          Length = 1632

 Score =  241 bits (616), Expect = 3e-62
 Identities = 116/124 (93%), Positives = 120/124 (96%)
 Frame = +1

Query: 1    DYVGKGMAGGELVVTPVETTGFVPEEATIVGNTCLYGATGGQVFIRGKAGERFAVRNSLA 180
            DYVGKGMAGGELVVTP E TGFVPE+A IVGNTCLYGATGGQ+F+RGKAGERFAVRNSLA
Sbjct: 1441 DYVGKGMAGGELVVTPTEITGFVPEDAAIVGNTCLYGATGGQIFVRGKAGERFAVRNSLA 1500

Query: 181  QAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 360
            QAVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ
Sbjct: 1501 QAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 1560

Query: 361  RVNA 372
            RV A
Sbjct: 1561 RVTA 1564


>emb|CBI30117.3| unnamed protein product [Vitis vinifera]
          Length = 1656

 Score =  241 bits (615), Expect = 5e-62
 Identities = 115/124 (92%), Positives = 121/124 (97%)
 Frame = +1

Query: 1    DYVGKGMAGGELVVTPVETTGFVPEEATIVGNTCLYGATGGQVFIRGKAGERFAVRNSLA 180
            DYVGKGMAGGELVVTPVE TGF+PE+ATIVGNTCLYGATGGQ+F+RGK GERFAVRNSLA
Sbjct: 1465 DYVGKGMAGGELVVTPVEDTGFLPEDATIVGNTCLYGATGGQIFVRGKGGERFAVRNSLA 1524

Query: 181  QAVVEGTGDHCCEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 360
            +AVVEGTGDHCCEYMTGGCVV+LGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ
Sbjct: 1525 EAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDDTLIPKVNKEIVKIQ 1584

Query: 361  RVNA 372
            RV A
Sbjct: 1585 RVTA 1588


Top