BLASTX nr result

ID: Coptis23_contig00007669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007669
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...    95   1e-43
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...    85   1e-38
ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago ...    76   4e-33
emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]    78   1e-32
ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205...    69   2e-28

>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
           gi|223530105|gb|EEF32019.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 912

 Score = 95.1 bits (235), Expect(4) = 1e-43
 Identities = 40/69 (57%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   LGSFLNCKFSLLCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRPCSCGNCLLR 182
           LGSF NC+FSL CYGPPLP   GS+A ++SK   S YAWELPS+L + G  C CG+CL++
Sbjct: 412 LGSFWNCEFSLFCYGPPLPGQQGSIASEISKISKSAYAWELPSDLLLSGEECQCGSCLVK 471

Query: 183 EDLSSEALP 209
           E+   +ALP
Sbjct: 472 EEFLKDALP 480



 Score = 66.2 bits (160), Expect(4) = 1e-43
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
 Frame = +1

Query: 322 GKLELQKYFASWVSMCWKL*RLSERSSH-----VDDSLLSLFFDQPYRFPKRFRYLRIDS 486
           GKLE Q+Y ASW      L R SE++        +D+LL    ++ Y+FP++F+YL+++ 
Sbjct: 524 GKLESQRYHASW-----DLVRKSEQAHRDPLLCSEDNLLFSLGEEEYKFPRKFKYLKLEY 578

Query: 487 LLGYMNGDLPKVLISKMKNSSLVHSERPPLCTQDSYDLVSDILKAAGVDHVGFCPTIEDL 666
           L  Y+NG+L +VL   +  +     E+    + D ++++ + LK  G       P I  +
Sbjct: 579 LFAYINGNLSQVLDLNLIKTCKGPREKESF-SMDFHEILCEKLKMCGFSQFRTSPAISVV 637

Query: 667 LNGISWAMNMHEIA 708
            N I    ++HE+A
Sbjct: 638 FNNIDLPTSIHEVA 651



 Score = 50.1 bits (118), Expect(4) = 1e-43
 Identities = 23/53 (43%), Positives = 37/53 (69%)
 Frame = +3

Query: 723 SGLNVDLLQLAFTFYSELTGVLVEHRKIPFETLDIPTLPKLLRFFSKKPTSRS 881
           + L ++ LQLAF+ YSE   VL++ +K+  + L +P +P+L  FF +KP+SRS
Sbjct: 657 ASLPMEFLQLAFSSYSEFLEVLLDQKKVALDFLVVPDIPQLPPFFFRKPSSRS 709



 Score = 32.7 bits (73), Expect(4) = 1e-43
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +2

Query: 215 KKERVLGFSIVGGDVSDPQTESDGCSGFMLIKPVYMGSL 331
           KK+ VLGF I+  D+S    ESD   GF LI+ +  G L
Sbjct: 488 KKDIVLGFGILSKDLSSLLFESDEFGGFTLIRLMSSGKL 526


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
           predicted protein [Populus trichocarpa]
          Length = 906

 Score = 85.1 bits (209), Expect(4) = 1e-38
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   LGSFLNCKFSLLCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRPCSCGNCLLR 182
           LGSF NC+FSL CYGP  P   GS AL++SKF + LYAW+ PS L + G  C  G+CL+R
Sbjct: 416 LGSFWNCEFSLFCYGPSFPPRKGSFALEISKFSSCLYAWDHPSGLMLSGDDCQRGDCLVR 475

Query: 183 EDLSSEALPK 212
           E    EALP+
Sbjct: 476 EQFWKEALPE 485



 Score = 64.3 bits (155), Expect(4) = 1e-38
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
 Frame = +1

Query: 322 GKLELQKYFASWVSMCWKL*RLSERSS--HVDDSLLSLFFDQPYRFPKRFRYLRIDSLLG 495
           GKLE Q+Y ASW  +  K   +++R    H +D+LL    D+ Y+ P++F+Y  ++ L  
Sbjct: 528 GKLESQRYCASWELV--KNIEVAQRDPMLHSEDNLLYFMGDEEYKVPRKFKYFELNYLHA 585

Query: 496 YMNGDLPKVLISKMKNSSLVHSERPPLCTQDSYDLVSDILKAAGVDHVGFCPTIEDLLNG 675
           ++NG+L +VL S M        E+  L + + ++++   LK  G       P I    N 
Sbjct: 586 HLNGNLSQVLDSNMAKPCECPHEK-ELFSLEFHEVLCKKLKICGFGQFRTSPAITVTFND 644

Query: 676 ISWAMNMHEIASSRM 720
           I+   ++HE+A  RM
Sbjct: 645 INLPTSIHEVALRRM 659



 Score = 46.2 bits (108), Expect(4) = 1e-38
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = +3

Query: 729 LNVDLLQLAFTFYSELTGVLVEHRKIPFETLDIPTLPKLLRFFSKKPTSRS 881
           L ++ LQLAF+ YSEL  VL++ +++  E   +P LP+L  FF +KP++ S
Sbjct: 663 LPMEFLQLAFSSYSELHEVLLDQKRVALEFSVVPELPQLPPFFLRKPSNHS 713



 Score = 32.0 bits (71), Expect(4) = 1e-38
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 215 KKERVLGFSIVGGDVSDPQTESDGCSGFMLIKPVYMGSL 331
           KK+ VLGF ++  D+S    E D   GF+LI+ +  G L
Sbjct: 492 KKDIVLGFGVLSNDLSSLLFEPDEFGGFVLIRLMSSGKL 530


>ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago truncatula]
           gi|355489812|gb|AES71015.1| hypothetical protein
           MTR_3g069120 [Medicago truncatula]
          Length = 884

 Score = 76.3 bits (186), Expect(4) = 4e-33
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = +3

Query: 3   LGSFLNCKFSLLCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRPCSCGNCLLR 182
           LGSF N +F++ CYGP      GS+   +SK   +  AWELPSE+++  R C CGNCL R
Sbjct: 407 LGSFWNSEFNIFCYGPA-SFRKGSITSTLSKINTTFCAWELPSEINLSSRGCHCGNCLFR 465

Query: 183 EDLSSEALPK 212
           E+LS +ALP+
Sbjct: 466 EELSKDALPE 475



 Score = 60.5 bits (145), Expect(4) = 4e-33
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 322 GKLELQKYFASWVSMCWKL*RLSERSSHVDDSLLSLFFDQPYRFPK-RFRYLRIDSLLGY 498
           GK ELQ+Y AS  +M   L    E    ++  LL     + Y++    FRYL+++ L  Y
Sbjct: 518 GKFELQRYHASQ-AMARSLEDCHEADLCLESHLLCPLSVKEYKYKSSEFRYLKLNYLYAY 576

Query: 499 MNGDLPKVLISKMKNSSLVHSERPPLCTQDSYDLVSDILKAAGVDHVGFCPTIEDLLNGI 678
            NG+L ++L +K++ +     E  P C+ + ++L+   L A G+ H    P I  +   +
Sbjct: 577 ANGNLGQILTTKLEKTYSDDQEEAPFCS-EVHELLCKKLNACGLGHSRSSPAISSIFKDV 635

Query: 679 SWAMNMHEIASSRM 720
           +   + HE+A  ++
Sbjct: 636 TLPASFHEVALRKL 649



 Score = 40.8 bits (94), Expect(4) = 4e-33
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = +3

Query: 729 LNVDLLQLAFTFYSELTGVLVEHRK-IPFETLDIPTLPKLLRFFSKKPTSRS 881
           L ++LLQLAF  YSE   V+  ++  +P E   +P LP+L  FF +KP+  S
Sbjct: 653 LPLELLQLAFLSYSECREVIAHNQNMVPLEFSAVPDLPQLPPFFLRKPSPHS 704



 Score = 31.2 bits (69), Expect(4) = 4e-33
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 212 VKKERVLGFSIVGGDVSDPQTESDGCSGFMLIKPVYMG 325
           +KKE VLGF I+  D++    E D   GF L++ +  G
Sbjct: 481 LKKEMVLGFGILSNDLASLLCEPDEHGGFTLVRVMSSG 518


>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score = 78.2 bits (191), Expect(4) = 1e-32
 Identities = 34/69 (49%), Positives = 42/69 (60%)
 Frame = +3

Query: 3   LGSFLNCKFSLLCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRPCSCGNCLLR 182
           +GSF  C+  + CYG       GS A ++SK C S YAWELPSELS+LG  C CG CL R
Sbjct: 364 MGSFWKCECRMFCYGSSFQDPKGSTAYEISKLCKSYYAWELPSELSLLGNECFCGTCLSR 423

Query: 183 EDLSSEALP 209
           ++     LP
Sbjct: 424 KEFLKGTLP 432



 Score = 51.2 bits (121), Expect(4) = 1e-32
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
 Frame = +1

Query: 322 GKLELQKYFASWVSMCWKL*RLSERSSHVDDSLLSLFFDQPYRFPKRFRYLRIDSLLGYM 501
           GKLE Q+Y+ASW  +       +   S   D + S+  D  Y + K+F+Y ++  L  Y 
Sbjct: 476 GKLESQRYYASWDLVKKSEIAHNNSLSDFKDYMYSM-GDLEYEYIKKFKYFKLAYLYEYF 534

Query: 502 -NGDLPKVLISKMKNSSLVHSERPPLCTQDSYDLVSDILKAAGVDHVGFCPTIEDLLNGI 678
            N DL K+LI  MK       + P     D  DL+ + LKA G        ++ D+   I
Sbjct: 535 WNADLAKLLIWNMKKPCGGPLQEPSF-NVDFRDLILEKLKACGFSR---SSSVSDVFRDI 590

Query: 679 SWAMNMHEIASSRM 720
           S   ++HE+   R+
Sbjct: 591 SIPTSIHEVTWRRL 604



 Score = 48.5 bits (114), Expect(4) = 1e-32
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +3

Query: 723 SGLNVDLLQLAFTFYSELTGVLVEHRKIPFETLDIPTLPKLLRFFSKKPTSRS 881
           SGL V LLQ AF+ YSE   VLV+ +++  E L +P  P+L  FF ++P+ RS
Sbjct: 606 SGLPVGLLQWAFSSYSEFLEVLVDKKQVSLEFLIVPDSPQLPPFFLRRPSCRS 658



 Score = 29.3 bits (64), Expect(4) = 1e-32
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 215 KKERVLGFSIVGGDVSDPQTESDGCSGFMLIKPVYMGSL 331
           KK+ V+GF I+  D+S    E D   GF LI+ +  G L
Sbjct: 440 KKDIVVGFGILDKDLSALLYEPDSFGGFTLIRLMSSGKL 478


>ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205354 [Cucumis sativus]
          Length = 907

 Score = 68.6 bits (166), Expect(4) = 2e-28
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = +3

Query: 3   LGSFLNCKFSLLCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRPCSCGNCLLR 182
           LGSF + +F++ CYGP  P  D S++ + SK+  S YAWE PS L + GR C C +CL +
Sbjct: 413 LGSFWSSEFNIFCYGPSPPGLDQSISSRSSKYFQSFYAWERPSNLILSGRECPCSSCLTK 472

Query: 183 EDLSSEAL 206
           ++   +A+
Sbjct: 473 QESLKDAI 480



 Score = 61.6 bits (148), Expect(4) = 2e-28
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
 Frame = +1

Query: 322 GKLELQKYFASWVSMCWKL*RLSERSSHVDDSLL-SLFFDQPYRFPKRFRYLRIDSLLGY 498
           G LE Q Y ASW S+  K+  + + S +++D LL     D  YRF +R+ Y   D L+GY
Sbjct: 525 GVLEAQTYQASWNSLK-KIDVVHKESLNLNDYLLYGWLVDDKYRFTRRYMYFNFDYLMGY 583

Query: 499 MNGDLPKVLISKMKNSSLVHSERPPLCTQ----DSYDLVSDILKAAGVDHVGFCPTIEDL 666
           +N  L +V+ S M+        +  LC Q    + ++++ + +KA G D +   P +  +
Sbjct: 584 LNDKLDEVVDSFMRKYC-----KDSLCEQSLSLEVHEVLCEKIKACGFDRLRSTPALAVV 638

Query: 667 LNGISWAMNMHEIASSRM*AA 729
            N IS   ++ EIA  ++ A+
Sbjct: 639 FNDISLPSSIQEIAFRKLWAS 659



 Score = 33.5 bits (75), Expect(4) = 2e-28
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 723 SGLNVDLLQLAFTFYSELTGVLVEHRKIPFETLDIPTLPKLLRFFSKKPTSRS 881
           + L ++LL  +F+ YSE    L     + FE L +P+L +L  F  + P+SRS
Sbjct: 658 ASLPMELLHFSFSSYSEF---LDNKNTVSFEFLSVPSLHQLPPFMLRDPSSRS 707



 Score = 29.3 bits (64), Expect(4) = 2e-28
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 215 KKERVLGFSIVGGDVSDPQTESDGCSGFMLIKPVYMGSL 331
           KKE VLGFSI+  ++S P T  +    F LI+ +  G L
Sbjct: 489 KKEIVLGFSILDNNLSLPFTGQNEYGSFTLIRLMSSGVL 527


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