BLASTX nr result

ID: Coptis23_contig00007668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007668
         (1813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...   244   7e-62
emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]   221   5e-55
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-52
ref|XP_004166877.1| PREDICTED: uncharacterized LOC101205354 [Cuc...   203   1e-49
ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205...   203   1e-49

>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
            gi|223530105|gb|EEF32019.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 912

 Score =  244 bits (622), Expect = 7e-62
 Identities = 144/398 (36%), Positives = 215/398 (54%), Gaps = 12/398 (3%)
 Frame = +3

Query: 3    IFCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRQCSCGDCLLREDLSNEALPE 182
            +FCYGPPLP   GS+A ++SK   S YAWELPS+L + G +C CG CL++E+   +ALP+
Sbjct: 422  LFCYGPPLPGQQGSIASEISKISKSAYAWELPSDLLLSGEECQCGSCLVKEEFLKDALPD 481

Query: 183  W-----KKERVLGFSILGGDVSDRHPESDGCSGFTLIRLVSSGKLELQKYVASWDSMCWK 347
            W     KK+ VLGF IL  D+S    ESD   GFTLIRL+SSGKLE Q+Y ASWD     
Sbjct: 482  WIDWQQKKDIVLGFGILSKDLSSLLFESDEFGGFTLIRLMSSGKLESQRYHASWD----- 536

Query: 348  LERSSERSSH-----VDDSLLSLFVDQXXXXXXXXXXLRIDSLLGYMNGDLPKVXXXXXX 512
            L R SE++        +D+LL    ++          L+++ L  Y+NG+L +V      
Sbjct: 537  LVRKSEQAHRDPLLCSEDNLLFSLGEEEYKFPRKFKYLKLEYLFAYINGNLSQVLDLNLI 596

Query: 513  XXXXFHSERPPLCTQDSYDLVSDILKAAGVDRIGFCPRIEDLLNGISCPMNMHEIASSRM 692
                   E+    + D ++++ + LK  G  +    P I  + N I  P ++HE+A   +
Sbjct: 597  KTCKGPREKESF-SMDFHEILCEKLKMCGFSQFRTSPAISVVFNNIDLPTSIHEVALRSI 655

Query: 693  WGGLNVDLLQLAFTFYSELTGVLVEHRKIPFEALDIPTLPQLPPFFSKKPTSRSSKWKPR 872
            W  L ++ LQLAF+ YSE   VL++ +K+  + L +P +PQLPPFF +KP+SRS++W  +
Sbjct: 656  WASLPMEFLQLAFSSYSEFLEVLLDQKKVALDFLVVPDIPQLPPFFFRKPSSRSNRWSHK 715

Query: 873  L--RNIHVGPVLPLPYLLTLQXXXXXXXXXXXXXXXXXXXXXXXXXQQCKNVMMVASKTT 1046
            +   +  VGPVLPLP L+TL                           +C  VM VA +  
Sbjct: 716  VPRTDALVGPVLPLPILMTLH--ELRNGCPNSEDEIGLFSPEMELSNRCNEVMQVAREMA 773

Query: 1047 SPKCHSEPNNCPPVSIANEVGENCVRSQELKPLFFHKP 1160
             P    E ++   VS+A++  +  V   + + L  ++P
Sbjct: 774  MPDSTVELHDDDAVSLADDRDDIWVDLDKPRSLCLYRP 811


>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score =  221 bits (563), Expect = 5e-55
 Identities = 143/392 (36%), Positives = 196/392 (50%), Gaps = 8/392 (2%)
 Frame = +3

Query: 3    IFCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRQCSCGDCLLREDLSNEALPE 182
            +FCYG       GS A ++SK C S YAWELPSELS+LG +C CG CL R++     LP 
Sbjct: 374  MFCYGSSFQDPKGSTAYEISKLCKSYYAWELPSELSLLGNECFCGTCLSRKEFLKGTLPV 433

Query: 183  W-----KKERVLGFSILGGDVSDRHPESDGCSGFTLIRLVSSGKLELQKYVASWDSMCWK 347
            W     KK+ V+GF IL  D+S    E D   GFTLIRL+SSGKLE Q+Y ASWD +   
Sbjct: 434  WVNWQQKKDIVVGFGILDKDLSALLYEPDSFGGFTLIRLMSSGKLESQRYYASWDLVKKS 493

Query: 348  LERSSERSSHVDDSLLSLFVDQXXXXXXXXXXLRIDSLLGYM-NGDLPKVXXXXXXXXXX 524
                +   S   D + S+  D            ++  L  Y  N DL K+          
Sbjct: 494  EIAHNNSLSDFKDYMYSMG-DLEYEYIKKFKYFKLAYLYEYFWNADLAKLLIWNMKKPCG 552

Query: 525  FHSERPPLCTQDSYDLVSDILKAAGVDRIGFCPRIEDLLNGISCPMNMHEIASSRMWGGL 704
               + P     D  DL+ + LKA G  R      + D+   IS P ++HE+   R+W GL
Sbjct: 553  GPLQEPSF-NVDFRDLILEKLKACGFSRSS---SVSDVFRDISIPTSIHEVTWRRLWSGL 608

Query: 705  NVDLLQLAFTFYSELTGVLVEHRKIPFEALDIPTLPQLPPFFSKKPTSRSSKWKPRLR-- 878
             V LLQ AF+ YSE   VLV+ +++  E L +P  PQLPPFF ++P+ RS+KW  +++  
Sbjct: 609  PVGLLQWAFSSYSEFLEVLVDKKQVSLEFLIVPDSPQLPPFFLRRPSCRSNKWSHKVQRD 668

Query: 879  NIHVGPVLPLPYLLTLQXXXXXXXXXXXXXXXXXXXXXXXXXQQCKNVMMVASKTTSPKC 1058
            +  VGPVLPLP L  L+                          +C  VM V S+      
Sbjct: 669  DALVGPVLPLPILSLLRDIHDTGCFDLEEADGFSFQEEVSL--ECNEVMKVTSEMAVSDS 726

Query: 1059 HSEPNNCPPVSIANEVGENCVRSQELKPLFFH 1154
             SE +    +S+AN+  E  + +Q LKP + +
Sbjct: 727  SSELHGDHAISLANDREETWIDTQNLKPFYLY 758


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
            predicted protein [Populus trichocarpa]
          Length = 906

 Score =  213 bits (543), Expect = 1e-52
 Identities = 124/315 (39%), Positives = 176/315 (55%), Gaps = 7/315 (2%)
 Frame = +3

Query: 3    IFCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRQCSCGDCLLREDLSNEALPE 182
            +FCYGP  P   GS AL++SKF + LYAW+ PS L + G  C  GDCL+RE    EALPE
Sbjct: 426  LFCYGPSFPPRKGSFALEISKFSSCLYAWDHPSGLMLSGDDCQRGDCLVREQFWKEALPE 485

Query: 183  W-----KKERVLGFSILGGDVSDRHPESDGCSGFTLIRLVSSGKLELQKYVASWDSMCWK 347
            W     KK+ VLGF +L  D+S    E D   GF LIRL+SSGKLE Q+Y ASW+ +   
Sbjct: 486  WTDWQQKKDIVLGFGVLSNDLSSLLFEPDEFGGFVLIRLMSSGKLESQRYCASWELVKNI 545

Query: 348  LERSSERSSHVDDSLLSLFVDQXXXXXXXXXXLRIDSLLGYMNGDLPKVXXXXXXXXXXF 527
                 +   H +D+LL    D+            ++ L  ++NG+L +V           
Sbjct: 546  EVAQRDPMLHSEDNLLYFMGDEEYKVPRKFKYFELNYLHAHLNGNLSQVLDSNMAKPCEC 605

Query: 528  HSERPPLCTQDSYDLVSDILKAAGVDRIGFCPRIEDLLNGISCPMNMHEIASSRMWGGLN 707
              E+  L + + ++++   LK  G  +    P I    N I+ P ++HE+A  RMW  L 
Sbjct: 606  PHEKE-LFSLEFHEVLCKKLKICGFGQFRTSPAITVTFNDINLPTSIHEVALRRMWAELP 664

Query: 708  VDLLQLAFTFYSELTGVLVEHRKIPFEALDIPTLPQLPPFFSKKPTSRSSKW--KPRLRN 881
            ++ LQLAF+ YSEL  VL++ +++  E   +P LPQLPPFF +KP++ S++   K +  +
Sbjct: 665  MEFLQLAFSSYSELHEVLLDQKRVALEFSVVPELPQLPPFFLRKPSNHSNRCLRKVQSSD 724

Query: 882  IHVGPVLPLPYLLTL 926
              VGP LPLP L TL
Sbjct: 725  ALVGPALPLPILSTL 739



 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 27/64 (42%), Positives = 38/64 (59%)
 Frame = +1

Query: 1297 EKVNSSDTLKEPVGLDFFDDMCPVKLNFDFPEMTFGAKELKGYKSLKRQFSNWLDDNTQY 1476
            EK +      E   L+FFDD+CP+ L FD  E+ F ++E K    LK+ FS W ++ T Y
Sbjct: 832  EKQSPHPEKVETFKLEFFDDLCPIDLKFDAREVKFSSQESKISNLLKKNFSKWQEEFTPY 891

Query: 1477 KEFC 1488
            +EFC
Sbjct: 892  REFC 895


>ref|XP_004166877.1| PREDICTED: uncharacterized LOC101205354 [Cucumis sativus]
          Length = 862

 Score =  203 bits (516), Expect = 1e-49
 Identities = 126/321 (39%), Positives = 177/321 (55%), Gaps = 13/321 (4%)
 Frame = +3

Query: 3    IFCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRQCSCGDCLLREDLSNEALPE 182
            IFCYGP  P  D S++ + SK+  S YAWE PS L + GR+C C  CL +++   +A+ E
Sbjct: 378  IFCYGPSPPGLDQSISSRSSKYFQSFYAWERPSNLILSGRECPCSSCLTKQESLKDAISE 437

Query: 183  W-----KKERVLGFSILGGDVSDRHPESDGCSGFTLIRLVSSGKLELQKYVASWDSMCWK 347
            W     KKE VLGFSIL  ++S      +    FTLIRL+SSG LE Q Y ASW+S+  K
Sbjct: 438  WVEWQQKKEIVLGFSILDNNLSLPFTGQNEYGSFTLIRLMSSGVLEAQTYQASWNSL-KK 496

Query: 348  LERSSERSSHVDDSLL-SLFVDQXXXXXXXXXXLRIDSLLGYMNGDLPKVXXXXXXXXXX 524
            ++   + S +++D LL    VD              D L+GY+N  L +V          
Sbjct: 497  IDVVHKESLNLNDYLLYGWLVDDKYRFTRRYMYFNFDYLMGYLNDKLDEVVDSFMRKYC- 555

Query: 525  FHSERPPLCTQ----DSYDLVSDILKAAGVDRIGFCPRIEDLLNGISCPMNMHEIASSRM 692
                +  LC Q    + ++++ + +KA G DR+   P +  + N IS P ++ EIA  ++
Sbjct: 556  ----KDSLCEQSLSLEVHEVLCEKIKACGFDRLRSTPALAVVFNDISLPSSIQEIAFRKL 611

Query: 693  WGGLNVDLLQLAFTFYSELTGVLVEHRKIPFEALDIPTLPQLPPFFSKKPTSRSSKWK-- 866
            W  L ++LL  +F+ YSE    L     + FE L +P+L QLPPF  + P+SRS+KW   
Sbjct: 612  WASLPMELLHFSFSSYSEF---LDNKNTVSFEFLSVPSLHQLPPFMLRDPSSRSTKWSHK 668

Query: 867  -PRLRNIHVGPVLPLPYLLTL 926
             PR  NI VGPVLPLP LL L
Sbjct: 669  VPRTENI-VGPVLPLPILLVL 688


>ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205354 [Cucumis sativus]
          Length = 907

 Score =  203 bits (516), Expect = 1e-49
 Identities = 126/321 (39%), Positives = 177/321 (55%), Gaps = 13/321 (4%)
 Frame = +3

Query: 3    IFCYGPPLPVADGSVALQVSKFCNSLYAWELPSELSVLGRQCSCGDCLLREDLSNEALPE 182
            IFCYGP  P  D S++ + SK+  S YAWE PS L + GR+C C  CL +++   +A+ E
Sbjct: 423  IFCYGPSPPGLDQSISSRSSKYFQSFYAWERPSNLILSGRECPCSSCLTKQESLKDAISE 482

Query: 183  W-----KKERVLGFSILGGDVSDRHPESDGCSGFTLIRLVSSGKLELQKYVASWDSMCWK 347
            W     KKE VLGFSIL  ++S      +    FTLIRL+SSG LE Q Y ASW+S+  K
Sbjct: 483  WVEWQQKKEIVLGFSILDNNLSLPFTGQNEYGSFTLIRLMSSGVLEAQTYQASWNSL-KK 541

Query: 348  LERSSERSSHVDDSLL-SLFVDQXXXXXXXXXXLRIDSLLGYMNGDLPKVXXXXXXXXXX 524
            ++   + S +++D LL    VD              D L+GY+N  L +V          
Sbjct: 542  IDVVHKESLNLNDYLLYGWLVDDKYRFTRRYMYFNFDYLMGYLNDKLDEVVDSFMRKYC- 600

Query: 525  FHSERPPLCTQ----DSYDLVSDILKAAGVDRIGFCPRIEDLLNGISCPMNMHEIASSRM 692
                +  LC Q    + ++++ + +KA G DR+   P +  + N IS P ++ EIA  ++
Sbjct: 601  ----KDSLCEQSLSLEVHEVLCEKIKACGFDRLRSTPALAVVFNDISLPSSIQEIAFRKL 656

Query: 693  WGGLNVDLLQLAFTFYSELTGVLVEHRKIPFEALDIPTLPQLPPFFSKKPTSRSSKWK-- 866
            W  L ++LL  +F+ YSE    L     + FE L +P+L QLPPF  + P+SRS+KW   
Sbjct: 657  WASLPMELLHFSFSSYSEF---LDNKNTVSFEFLSVPSLHQLPPFMLRDPSSRSTKWSHK 713

Query: 867  -PRLRNIHVGPVLPLPYLLTL 926
             PR  NI VGPVLPLP LL L
Sbjct: 714  VPRTENI-VGPVLPLPILLVL 733


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