BLASTX nr result

ID: Coptis23_contig00007665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007665
         (1222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ94169.1| PHD finger transcription factor [Elaeis guineensis]    246   6e-63
ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802...   244   2e-62
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248...   238   3e-60
emb|CBI30190.3| unnamed protein product [Vitis vinifera]              238   3e-60
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]   238   3e-60

>gb|AEQ94169.1| PHD finger transcription factor [Elaeis guineensis]
          Length = 276

 Score =  246 bits (629), Expect = 6e-63
 Identities = 123/198 (62%), Positives = 148/198 (74%)
 Frame = -2

Query: 1221 DYITKIIKVKQEETNSNLDIRWRLLSGKVDSLESRSLLSKAVAIFHNRFDPIVDAVTGRD 1042
            D I K   +K     +N DIRW+LLSGK    ESR LLSKAVAIFH  FDPIVDA TGRD
Sbjct: 75   DVIRKKCDIKGFNIGANTDIRWQLLSGKTADAESRLLLSKAVAIFHESFDPIVDATTGRD 134

Query: 1041 LIPRMVYGRSIRDQDFGGMFCAVLIVNSSVVSAGLLRILGKELAELPLVATSSDYQGQGC 862
            LIP MVYGR++RDQD+GG++CA+L V SSVVSAG+LR+LG E+AELPLVATS ++QGQG 
Sbjct: 135  LIPTMVYGRTVRDQDYGGIYCALLTVGSSVVSAGILRVLGSEIAELPLVATSREHQGQGY 194

Query: 861  FQSLFSCIESYLAVLNVKNIVLPAAEEAEAIWTNKFGFQKMSLDQVTNYTKDYQMTIFKG 682
            FQSLFSCIE  L  L VK+ VLPAA+EAE+IWT KFGF K++ D++  Y    + T+F+G
Sbjct: 195  FQSLFSCIERLLVTLKVKHFVLPAADEAESIWTKKFGFTKITSDELHKYLNGARTTVFQG 254

Query: 681  TPMLHKPVCKARATRRPT 628
            T  LHKPV     + R T
Sbjct: 255  TSTLHKPVTVPHVSSRET 272


>ref|XP_003553568.1| PREDICTED: uncharacterized protein LOC100802562 [Glycine max]
          Length = 796

 Score =  244 bits (624), Expect = 2e-62
 Identities = 125/190 (65%), Positives = 154/190 (81%), Gaps = 3/190 (1%)
 Frame = -2

Query: 1206 IIKVKQEETNSN--LDIRWRLLSGKVDSLESRSLLSKAVAIFHNRFDPIVDAVTGRDLIP 1033
            +IK KQEE      +D+RWRLL+GK+ S E+R LL +AV+IFH  F+PIVDA +GRDLIP
Sbjct: 601  VIKKKQEEKGLEPIIDVRWRLLNGKIASPETRPLLLEAVSIFHECFNPIVDAASGRDLIP 660

Query: 1032 RMVYGRSIRDQDFGGMFCAVLIVNSSVVSAGLLRILGKELAELPLVATSSDYQGQGCFQS 853
             MVYGR++R Q+FGGM+CA+LIVNSSVVSAG+LRI G ++AELPLVATS+   G+G FQ+
Sbjct: 661  AMVYGRNVRGQEFGGMYCALLIVNSSVVSAGMLRIFGSDVAELPLVATSNGNHGKGYFQT 720

Query: 852  LFSCIESYLAVLNVKNIVLPAAEEAEAIWTNKFGFQKMSLDQVTNYTKD-YQMTIFKGTP 676
            LFSCIE  LA LNVKN+VLPAAEEAE+IWT+KFGF KM+ D++TNY K+ +QM  FKGT 
Sbjct: 721  LFSCIERLLAFLNVKNLVLPAAEEAESIWTDKFGFSKMNPDELTNYRKNCHQMVSFKGTN 780

Query: 675  MLHKPVCKAR 646
            MLHK V   R
Sbjct: 781  MLHKMVPSCR 790


>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
          Length = 2411

 Score =  238 bits (606), Expect = 3e-60
 Identities = 122/193 (63%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
 Frame = -2

Query: 1221 DYITKIIKVKQE----ETNSNLDIRWRLLSGKVDSLESRSLLSKAVAIFHNRFDPIVDAV 1054
            D +  +IK K E    E+ ++ ++RWRLLSGK+ S E+R LLS+AVAIFH+RFDPI+D+V
Sbjct: 2209 DSLLNVIKEKHERKGLESIADYNVRWRLLSGKLASPETRVLLSEAVAIFHDRFDPIIDSV 2268

Query: 1053 TGRDLIPRMVYGRSIRDQDFGGMFCAVLIVNSSVVSAGLLRILGKELAELPLVATSSDYQ 874
            TGRDLIP MVYGR++R QDF G++CAV+ VNS VVSAG+LR+ G+E+AELPLVATS D Q
Sbjct: 2269 TGRDLIPAMVYGRNVRGQDFSGLYCAVITVNSHVVSAGILRVFGQEVAELPLVATSVDNQ 2328

Query: 873  GQGCFQSLFSCIESYLAVLNVKNIVLPAAEEAEAIWTNKFGFQKMSLDQVTNYTKD-YQM 697
            G+G FQ LFSCIE  LA LNV++ VLPAAEEAE IWT KFGF+K++ DQ++ Y K  YQM
Sbjct: 2329 GRGYFQILFSCIEKLLAFLNVRSFVLPAAEEAECIWTKKFGFKKITPDQLSEYRKSFYQM 2388

Query: 696  TIFKGTPMLHKPV 658
              F+GT ML K V
Sbjct: 2389 ISFQGTCMLEKGV 2401


>emb|CBI30190.3| unnamed protein product [Vitis vinifera]
          Length = 879

 Score =  238 bits (606), Expect = 3e-60
 Identities = 122/193 (63%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
 Frame = -2

Query: 1221 DYITKIIKVKQE----ETNSNLDIRWRLLSGKVDSLESRSLLSKAVAIFHNRFDPIVDAV 1054
            D +  +IK K E    E+ ++ ++RWRLLSGK+ S E+R LLS+AVAIFH+RFDPI+D+V
Sbjct: 677  DSLLNVIKEKHERKGLESIADYNVRWRLLSGKLASPETRVLLSEAVAIFHDRFDPIIDSV 736

Query: 1053 TGRDLIPRMVYGRSIRDQDFGGMFCAVLIVNSSVVSAGLLRILGKELAELPLVATSSDYQ 874
            TGRDLIP MVYGR++R QDF G++CAV+ VNS VVSAG+LR+ G+E+AELPLVATS D Q
Sbjct: 737  TGRDLIPAMVYGRNVRGQDFSGLYCAVITVNSHVVSAGILRVFGQEVAELPLVATSVDNQ 796

Query: 873  GQGCFQSLFSCIESYLAVLNVKNIVLPAAEEAEAIWTNKFGFQKMSLDQVTNYTKD-YQM 697
            G+G FQ LFSCIE  LA LNV++ VLPAAEEAE IWT KFGF+K++ DQ++ Y K  YQM
Sbjct: 797  GRGYFQILFSCIEKLLAFLNVRSFVLPAAEEAECIWTKKFGFKKITPDQLSEYRKSFYQM 856

Query: 696  TIFKGTPMLHKPV 658
              F+GT ML K V
Sbjct: 857  ISFQGTCMLEKGV 869


>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
          Length = 2427

 Score =  238 bits (606), Expect = 3e-60
 Identities = 122/193 (63%), Positives = 153/193 (79%), Gaps = 5/193 (2%)
 Frame = -2

Query: 1221 DYITKIIKVKQE----ETNSNLDIRWRLLSGKVDSLESRSLLSKAVAIFHNRFDPIVDAV 1054
            D +  +IK K E    E+ ++ ++RWRLLSGK+ S E+R LLS+AVAIFH+RFDPI+D+V
Sbjct: 2225 DSLLNVIKEKHERKGLESIADYNVRWRLLSGKLASPETRVLLSEAVAIFHDRFDPIIDSV 2284

Query: 1053 TGRDLIPRMVYGRSIRDQDFGGMFCAVLIVNSSVVSAGLLRILGKELAELPLVATSSDYQ 874
            TGRDLIP MVYGR++R QDF G++CAV+ VNS VVSAG+LR+ G+E+AELPLVATS D Q
Sbjct: 2285 TGRDLIPAMVYGRNVRGQDFSGLYCAVITVNSHVVSAGILRVFGQEVAELPLVATSVDNQ 2344

Query: 873  GQGCFQSLFSCIESYLAVLNVKNIVLPAAEEAEAIWTNKFGFQKMSLDQVTNYTKD-YQM 697
            G+G FQ LFSCIE  LA LNV++ VLPAAEEAE IWT KFGF+K++ DQ++ Y K  YQM
Sbjct: 2345 GRGYFQILFSCIEKLLAFLNVRSFVLPAAEEAECIWTKKFGFKKITPDQLSEYRKSFYQM 2404

Query: 696  TIFKGTPMLHKPV 658
              F+GT ML K V
Sbjct: 2405 ISFQGTCMLEKGV 2417


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