BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007664
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   101   6e-20
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_003572936.1| PREDICTED: F-box protein PP2-B10-like [Brach...    92   6e-17
ref|XP_002453024.1| hypothetical protein SORBIDRAFT_04g036860 [S...    90   2e-16
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...    87   1e-15

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/130 (46%), Positives = 77/130 (59%), Gaps = 17/130 (13%)
 Frame = +2

Query: 2   VFKVTDESYGLQNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRAPHY---RRR-----RS 157
           VFK  + +YGL     E  V  V   GS +G R VYLD    RA  Y   RRR     RS
Sbjct: 164 VFKPKEGAYGLDYQPVEVGVGLV---GSENGKRNVYLDSQRGRAHRYHLVRRRIGLHNRS 220

Query: 158 SV---------TQYVGQLPNTRGDGWMEIELGEFYNDQGEDGEVKMTLEEVKNRDWKSGL 310
            +         ++  GQ P  RGDGW+EIELGEF+  +GEDGE++M ++EVK+ DWK GL
Sbjct: 221 RIVGMQEPVPASENNGQHPKERGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGL 280

Query: 311 IVEGMELRPK 340
            VEG+E+RPK
Sbjct: 281 TVEGIEIRPK 290


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/130 (43%), Positives = 71/130 (54%), Gaps = 17/130 (13%)
 Frame = +2

Query: 2   VFKVTDESYGLQNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRAP--HYRRRRSSV---- 163
           VF+ T   YGL     E  V  V   GS  G R VYLD +  R    H+  RR  +    
Sbjct: 175 VFRPTRGLYGLDYQPVEVGVGLV---GSECGMRNVYLDSERGRRQQYHFVSRRIGLFNRC 231

Query: 164 -----------TQYVGQLPNTRGDGWMEIELGEFYNDQGEDGEVKMTLEEVKNRDWKSGL 310
                       +  GQ P  R DGW+EIELGEF+  +GED E++M+++EVK  DWK GL
Sbjct: 232 RIVGMPASEPARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGL 291

Query: 311 IVEGMELRPK 340
           IVEG+E+RPK
Sbjct: 292 IVEGIEIRPK 301


>ref|XP_003572936.1| PREDICTED: F-box protein PP2-B10-like [Brachypodium distachyon]
          Length = 276

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/113 (44%), Positives = 64/113 (56%)
 Frame = +2

Query: 2   VFKVTDESYGLQNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRAPHYRRRRSSVTQYVGQ 181
           V+K+  E YGL +P  E SV     G +    R    DYD          R +      Q
Sbjct: 169 VYKIDTEFYGLDSPVQEASVSI---GETKLTRRVCLQDYDDEDREIPENYRENA-----Q 220

Query: 182 LPNTRGDGWMEIELGEFYNDQGEDGEVKMTLEEVKNRDWKSGLIVEGMELRPK 340
           LP+ R DGWME+ELGEF+N+ GEDGEV + L E K  +WK GLIV+G+E+R K
Sbjct: 221 LPHKRTDGWMELELGEFFNEGGEDGEVSVDLTETKGGNWKKGLIVQGVEIRVK 273


>ref|XP_002453024.1| hypothetical protein SORBIDRAFT_04g036860 [Sorghum bicolor]
           gi|241932855|gb|EES06000.1| hypothetical protein
           SORBIDRAFT_04g036860 [Sorghum bicolor]
          Length = 302

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
 Frame = +2

Query: 2   VFKVTDESYGLQNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRA---------------- 133
           VFK++DESYGL +P  E  V      G+    R V L YD+                   
Sbjct: 173 VFKMSDESYGLDDPLQEAEVSI----GATKSTRRVCLGYDNEDEDGEEVPQNYRSFRPIG 228

Query: 134 ---PHYRRRRSSVTQYVG-QLPNTRGDGWMEIELGEFYNDQGEDGEVKMTLEEVKNRDWK 301
              P   RR   V   V  Q P  R DGWME+E+GEF N++GEDGEV ++L E +  +WK
Sbjct: 229 LFRPRVGRRNRRVPPGVQVQRPQARADGWMEMEMGEFKNEEGEDGEVSISLLETRGGNWK 288

Query: 302 SGLIVEGMELRPK 340
            GLI++G+E+R K
Sbjct: 289 KGLILQGIEIRVK 301


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/134 (39%), Positives = 70/134 (52%), Gaps = 21/134 (15%)
 Frame = +2

Query: 2   VFKVTDESYGLQNPTTEGSVQFVLGGGSASGYRTVYLDYDSNRAPHYRRRRSSVTQYVGQ 181
           VFK T  +YG +    E  V  V   GS +    VYLD +  R    RRR   V + +G 
Sbjct: 173 VFKSTTGAYGFEYQPAEAVVGLV---GSETCKHNVYLDAERGR----RRRSQIVRRRIGL 225

Query: 182 L---------------------PNTRGDGWMEIELGEFYNDQGEDGEVKMTLEEVKNRDW 298
           L                     P  RGDGW+EIELGEF+  +GEDGE+++++ EVK   W
Sbjct: 226 LNRGRIFGLQASLRNGESDCKYPKERGDGWLEIELGEFFKKKGEDGELELSVLEVKGGHW 285

Query: 299 KSGLIVEGMELRPK 340
           K GL V+G+E+RPK
Sbjct: 286 KGGLAVQGIEIRPK 299